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[+] Show/hide bicluster #235 rows and columns.
bicluster 235
Mycobacterium tuberculosis H37Rv
15x239
[+] Show/hide bicluster #235 rows (genes).
bicluster 235 genes
Mycobacterium tuberculosis H37Rv
15
[+] Show/hide bicluster #235 rows (short gene names).
bicluster 235 short names
Mycobacterium tuberculosis H37Rv
15
short_name
[+] Show/hide bicluster #235 rows (long gene names).
bicluster 235 long names
Mycobacterium tuberculosis H37Rv
15
long_name
[+] Show/hide bicluster #235 rows (NCBI RefSeq gene IDs).
bicluster 235 NCBI RefSeq IDs
Mycobacterium tuberculosis H37Rv
26
[+] Show/hide bicluster #235 gene upstream sequences.
bicluster 235 upstream sequences
Mycobacterium tuberculosis H37Rv
15
upstream
[+] Show/hide bicluster #235 columns (arrays; conditions).
bicluster 235 arrays
Mycobacterium tuberculosis H37Rv
239
[+] Show/hide bicluster #235 ratios.
bicluster 235 ratios
Mycobacterium tuberculosis H37Rv
15x239
GENES 2867:::H37Rv..7H9.shake.replicate.2 2867:::H37Rv..7H9.shake.replicate.3 2867:::H37Rv..7H9.shake.replicate.4 2867:::H37Rv..Youman.media.replicate.4 2885:::Strain.1254...replicate.1 4055:::H37Rv.Vs.M.bovis.rep2 4060:::H37Rv.0.05..SDS.exposure.for.1h.rep.6 4060:::H37Rv.sigE.null.0.05..SDS.exposure.for.1h.rep.2 4062:::H37Rv.0.day.ctrl.vs.Rv3132.34.KO.hypoxia.4.day.rep.3 4062:::H37Rv.ctrl.vs.Rv3132.34.KO..complemented...0.05.mM.DETA.NO.40min.rep.2 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.2hrs.rep.1 4062:::MTB.strain.1254.Ctrl.vs.1.0.mM.DETA.NO.40min.rep.4 4062:::MTB1254.Day.0.vs.low.Oxygen.Day.4.rep.1 4068:::H37Rv.delta.mprAB.mutant.vs..H37Rv.delta.mprAB.mutant.SDS.treated.rep.3 4068:::H37Rv.delta.mprAB.mutant.vs..H37Rv.delta.mprAB.mutant.SDS.treated.rep.5 4068:::H37Rv.vs..H37Rv.delta.mprAB.mutant.rep.2 4068:::H37Rv.vs..H37Rv.delta.mprAB.mutant.rep.4 4068:::H37Rv.vs..H37Rv.SDS.treated.rep.1 4068:::H37Rv.vs..H37Rv.SDS.treated.rep.5 4082:::H37Rv.wild.type.Vs.Rv3676.null.1 4082:::Rv3676.null.Vs.H37Rv.wild.type.1 4084:::High.iron.wt.vs.high.iron.ideR.Complement.2a 4084:::High.iron.wt.vs.high.iron.ideR.KO.3a 4084:::High.iron.wt.vs.high.iron.ideR.KO.3b 4089:::H37Rv.whiB7.null.ethanol.vs..1.0.ug.ml.Tetracyclin.for.15.min.rep.1 4089:::MTB1254.ethanol.vs..0.5.ug.ml.Erythromycin.for.30.min.rep.3 4089:::MTB1254.ethanol.vs..0.5.ug.ml.Erythromycin.for.30.min.rep.4 4089:::MTB1254.ethanol.vs..0.5.ug.ml.Tetracyclin.for.15.min.rep.2 4089:::MTB1254.ethanol.vs..5.0.ug.ml.Erythromycin.for.15.min.rep.1 4101:::NRP.Day10..3 4107:::Dubos.NRP.1vsDubos.log.phase 4107:::EMB.10ug.mL.vs.DMSO.12h.1 4107:::Mtm.0.2ug.mL.vs.ctrl.8h.1 4107:::Palmitate.Glucose..1 4107:::Palmitate.Glucose..2 4107:::pH5.2vspH6.8..2h. 4107:::pH5.2vspH6.8..5.5h. 4107:::pH5.6vspH6.8..2h. 4107:::Succinate.7H9.based.medium..1 4107:::X0.05mM.Palmitate.10mM.Gluc..1 4107:::X0.12mg.mL.NamvspH5.6..7h. 4107:::X0.1mg.mL.TriclosanvsEtOH..6hA 4107:::X0.1mM.GSNO.DMSO..3.5h 4107:::X0.1mM.GSNO.DMSO..6h 4107:::X0.1mMGSNO.10ug.mLmdvsDMSO.6h 4107:::X0.2mg.mL.TLMvsEtOH..6hA 4107:::X0.2ug.mL..111891.DMSO..5.5h..2 4107:::X0.2ug.mL.PA824.DMSO..6h..1 4107:::X0.4mM.NaN3vsDMSO..4h 4107:::X0.4mM.NaN3vsDMSO..4h.A 4107:::X0.4ug.mL.PA824.DMSO..6h..2 4107:::X0.4ug.mL.PA824.DMSO..6h..3 4107:::X0.5mM.DNP.DMSO..6h 4107:::X0.5ug.mL.CervsEtOH..6h 4107:::X0.5ug.mL.CervsEtOH..6hA 4107:::X0.5uMValinomycin.70mMKClvsDMSO.6h 4107:::X100uM.DCCD.DMSO..6h 4107:::X10mM.Succinate.10mM.Gluc..1 4107:::X10mM.Succinate.10mM.Gluc..2 4107:::X10ug.mL..59vsDMSO..6h 4107:::X10ug.mLmdn.0.1mMGSNO.DMSO..2 4107:::X10uM.CCCP.DMSO..6h 4107:::X1mM.DNP.DMSO..6h..1 4107:::X1mM.DNP.DMSO..6h..2 4107:::X1ug.mL..111891.DMSO..12h..2 4107:::X1ug.mL..111895vsDMSO..6h 4107:::X1ug.mL..124196vsDMSO..6h 4107:::X1ug.mL..241vsDMSO..6hA 4107:::X1uM.ValinomycinvsDMSO..6h 4107:::X1uM.ValinomycinvsDMSO..6h.A 4107:::X24ug.mL.Econazole.DMSO..6h..2 4107:::X25ug.mL.TRZ.DMSO..6h 4107:::X2mM.DTTvsDMSO..6h.A 4107:::X2ug.mL.PA824.DMSO..6h..2 4107:::X50ug.mL.Thioridazine.DMSO..6h 4107:::X50ug.mL.Triclosan.DMSO..6h 4107:::X50ug.mL.Triclosan.EtOH 4107:::X50uM.CCCP.DMSO..6h..2 4107:::X50uM.NigericinvsDMSO..6h 4107:::X50uM.NigericinvsDMSO..6h.A 4107:::X5ug.mL.CFZ.0.1mM.GSNO.DMSO..1 4107:::X5ug.mL.KCN.DMSO..6h..2 4107:::X5ug.mLStreptomycinvsEtOH.6h 4107:::X60ug.mL.ChlorprovsEtOH..6h 4107:::X6ug.mL.MenadionevsDMSO..6h 4107:::X7d.Dubos.NRP.1vsDubos.log.phase.A 4363:::H37Rv.hypoxia.7.day.rep.2 4363:::H37Rv.hypoxia.7.day.rep.5 4363:::H37Rv.hypoxia.7.day.rep.6 4363:::H37Rv.hypoxia.8hr.rep.3 4364:::H37dosR.mutant.hypoxia.8hr.rep.3 4365:::H37Rv.sigma.H.null.mutant.diamide.1h.rep.3 4523:::H37Rv.wild.type.control.vs.5mM.Diamide.for.60.min.rep.3 4523:::H37Rv.wild.type.vs.H37Rv.sigB.null.mutant.rep.4 4575:::Extracted.Lung.Surfactant.2hrs.rep.1 4575:::Extracted.Lung.Surfactant.30min.rep.2 4575:::Purified.Human.SP.A.Uncoated.2hrs.rep2 4575:::Purified.Surfactant.Lipids.2hrs.rep.1 4575:::Whole.Lung.Surfactant.2hrs.rep.2 4581:::H37Rv.Ctrl.vs.2.ug.ml.garlic.extract.6hrs.rep.1 4581:::H37Rv.Ctrl.vs.2.ug.ml.garlic.extract.6hrs.rep2 4581:::H37Rv.Ctrl.vs.5.ug.ml.garlic.extract.6hrs 4583:::X0.2mg.ml.TLM.vs.Ethanol.6hrs.rep.2 4583:::X0.4ug.ml.PA.824.vs.DMSO.6hrs.rep.3 4583:::X0.5ug.mL.Cerulenin.vs.DMSO..6hrs.rep.2 4583:::X130ug.ml.TLM.vs.DMSO.6hrs.rep.1 4599:::H37Rv.vs.SigE.mutant.24hrs.after.macrophage.infection.rep.2 4599:::H37Rv.vs.SigE.mutant.24hrs.after.macrophage.infection.rep.3 4599:::H37Rv.wild.type.vs.sigE.mutant.in.7H9.media..DS..rep.1 4599:::SigE.mutant.grown.in.7H9.vs.24hrs.after.infection.in.macrophages.rep.1 4615:::AA_30uM_10.min_05 4615:::AA_30uM_1h_02 4615:::AA_30uM_30min_04 4615:::AA_30uM_30min_05 4615:::Acetate.3mM.10m.06 4615:::Acetate.3mM.2h.05 4615:::Acetate.3mM.2h.06 4615:::C2_ceramide_5uM_1h_01 4615:::CHP.AA.1h.1 4615:::CK_PA.Na.24h.1 4615:::CK.for.AA.NA.4h 4615:::CK.for.MDG.OA.4h 4615:::CK.for.OA.PA.Na.4h 4615:::CK.PA.Na.2h.01 4615:::CK.PA.NA.2h.02..100901 4615:::ETYA_30uM_1h_01 4615:::L2A_30uM_10min_05 4615:::L2A_30uM_1h_02 4615:::L2A_30uM_1h_05 4615:::L2A_30uM_2h_03 4615:::L2A_30uM_30min_02 4615:::L2A_30uM_30min_03 4615:::L2A_30uM_30min_04 4615:::L2A_30uM_4h_03 4615:::MDA_1254.pMV261_02 4615:::MDA_1254.pMV261_04 4615:::MDG_1254.pMV261_02 4615:::MDG.MD.glycerol 4615:::MTB1254_Bottom_14D_01 4615:::MTB1254_FA5_10min_01 4615:::MTB1254_FA5_10min_02 4615:::MTB1254_Pellicle_10D_03 4615:::MTB1254.0465.4._SDS_60MIN_01 4615:::MTB1254.0485.1._OA_10m_01 4615:::MTB1254.0485.1._OA_30m_02 4615:::MTB1254.0485.1._PA_30m_01 4615:::MTB1254.3524.1._OA_10min_04 4615:::MTB1254.B4.1._OA_10MIN_01 4615:::MTB1254.B4.1._OA_30MIN_02 4615:::MTB1254.B4.1._PA_30MIN_03 4615:::MTB1254.B4.1._PA_30MIN_04 4615:::MTB1254.Rv3524.2._PA50.OA30_30m_01 4615:::MTB1370_PA50_1h_04 4615:::OA_50uM_1h_07 4615:::OA_50uM_30min_04 4615:::OA_50uM_30min_08 4615:::PA_100uM_2h_03 4615:::PA_300uM_24h_T0_01 4615:::PA_50uM_10min_06 4615:::PA_50uM_10min_T0_01 4615:::PA_50uM_1h_01 4615:::PA_50uM_1h_04 4615:::PA_50uM_1h_07 4615:::PA_50uM_24h_04 4615:::PA_50uM_24h_09 4615:::PA_50uM_2h_02 4615:::PA_50uM_30min_03 4615:::PA_50uM_30min_08 4615:::PA_50uM_4h_07 4615:::PA_50uM.AA_30uM_30min_02 4615:::PA_50uM.OA_10uM_4h_03 4615:::Rv_OA30_30mim_01 4615:::Rv_TA_OA30_30mim_03 4615:::Rv.MT106_100503_02 4615:::Rv.MT96_100503_02 4615:::Rv3524.1_OA_10min 4615:::Starvation_1254_24h_02 4615:::Starvation_1254_24h_03 4615:::Starvation_1254_24h_08 4615:::Starvation_1254_3d_01 4615:::Starvation_1254_5d_01 4615:::Starvation_1254_5d_04 4615:::Starvation_1254_6h_07 4615:::Starvation_1254_OA50_12h_02 4615:::Starvation_1254_OA50_12h_04 4615:::Starvation_1254_OA50_24h_02 4615:::Starvation_1254_OA50_24h_03 4615:::Starvation_1254_OA50_5d_04 4615:::Starvation_1254_PA50.OA30_24h_04 4615:::Starvation_1254_PA50.OA30_6h_04 4615:::TBD098 4615:::TBD1137 4615:::TBD1275 4615:::TBD1276 4615:::TBD622 4615:::TBE058 4615:::TBE735 4615:::Test.2 4615:::Test.6 4615:::WM_1254_14d_01 4615:::WM_1254_vs_1254whiB4_20day 4615:::WM_1254.whiB4._10d_02 4615:::WM_T0_01 4615:::WT_85.1_PA_10min_02 4615:::X2.2..Dipyridyl_1mM_20min_01 4615:::X2.BA_500uM_30min_01 4630:::H37Rv.wild.type.Cy3.vs.Rv0485.Tn.mutant.Cy5.rep.3 4638:::CDC1551.wild.type.vs.kstR.null.in.1mg.ml.cholesterol.for.24.hrs.rep.3 4696:::H37Rv.wt.vs.dosS.dosT.null.dosT.complemented.rapid.anaerobic.dormancy.day.6.rep.2 4699:::CDC1551.Ctrl.vs.clinical.isolate.10514.01_Afri2.rep.3 4703:::Clinical.isolate.1934.03_Beijing.extra.vs.intracellular.in.resting.macrophages.rep.1 4703:::Clinical.isolate.5468.02_Afri2.extra.vs.intracellular.in.resting.macrophages.rep.2 4704:::Clinical.isolate.10514.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.2 4704:::Clinical.isolate.1500.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.1 4704:::Clinical.isolate.2169.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.1 4704:::Clinical.isolate.2191.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.2 4704:::Clinical.isolate.2333.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.2 4729:::H37Rv.wild.type.vs.PepD.null.mutant.rep.2 4731:::X0.4ug.ml.PA.824.vs.DMSO.6hrs.rep.2 4731:::X5ug.ml.Rifampicin.vs.DMSO.2.5hrs 4795:::CDC1551.ctrl.vs.10.ug.ml.Thioridazine.4hr.rep.2 4802:::H37Rv.ctrl.vs.relE1.overexpression.24.hr.rep.2 4802:::H37Rv.ctrl.vs.relE1.overexpression.72.hr.rep.3 4802:::H37Rv.ctrl.vs.relE1.overexpression.72.hr.rep.4 4802:::H37Rv.ctrl.vs.relE2.overexpression.24.hr.rep.3 4802:::H37Rv.ctrl.vs.relE2.overexpression.72.hr.rep.4 4802:::H37Rv.ctrl.vs.relE2.overexpression.72.hr.rep.5 4802:::H37Rv.ctrl.vs.relE3.overexpression.24.hr.rep.1 4802:::H37Rv.ctrl.vs.relE3.overexpression.6.hr.rep.3 4815:::H37Rv.reaeration.for.1hrs.rep.2 4815:::H37Rv.reaeration.for.1hrs.rep.8 4815:::H37Rv.reaeration.for.4hrs.rep.1 4815:::H37Rv.reaeration.for.4hrs.rep.2 4815:::H37Rv.reaeration.for.4hrs.rep.4 4928:::Mtb.Erdman.strain.20.ppm.CO.rep.1 Maciag_JBacteriol2007:::H37Rv.wild.type.vs.H37Rv.FurB.null.rep.1 Raghavan_Nature2008:::espR.mutant.complemented.with.WT.espR..R...rep2 Schnappinger_JEM2003:::MTB.in.Wild.type.macrophages...IFNg.for.24hrs Schnappinger_JEM2003:::MTB.in.Wild.type.macrophages.for.48hrs
RV0084 -0.0854988286660471 0.693490499180161 0.237496746294575 -0.826488677105124 -0.353304683535359 0.183952025311799 0.490538734164796 0.490538734164796 -1.12084493854199 0.109108799327096 0.168622689869149 -0.466192142579411 -0.505868069607446 NA NA NA NA NA NA -0.269796303790638 0.269796303790638 1.3 -0.1 1 0.496323389048815 0.572680833517864 0.903563092883741 -0.394513463090084 0.521775870538498 NA 0.441907738967424 0.116291510254585 0.511682645120176 -1.00010698818943 -1.04662359229127 0.139549812305502 0.9535903840876 0.534940947171093 -0.232583020509171 -1.27920661280044 0.279099624611005 0.674490759476595 0.465166041018342 -0.883815477934849 -0.511682645120176 -0.883815477934849 -1.72111435176786 -0.907073779985766 -4.09346116096141 -1.53504793536053 NA -1.18617340459677 -0.279099624611005 0.116291510254585 -0.441907738967424 -2.44212171534629 0.0930332082036683 -1.13965680049494 -1.13965680049494 -0.39539113486559 -1.30246491485136 -0.976848686138517 1.83740586202245 0.721007363578429 NA 1.41875642510594 0.348874530763756 -0.488424343069259 -1.41875642510594 -1.60482284151328 -1.27920661280044 0.721007363578429 0.348874530763756 -1.27920661280044 1.18617340459677 0.744265665629346 NA 1.18617340459677 -0.79078226973118 -1.51178963330961 -0.581457551272927 -1.20943170664769 -1.11639849844402 -1.32572321690227 NA 0.837298873833015 -2.07380740973401 -0.17113944643436 1.10737288869292 -0.412748076694633 0.195247325111646 0.674490759476595 0.262937075728164 0.994588069058708 -2.63589333611406 -0.194485065615951 0.351728310156507 -1.32001565811677 -2.24692320488215 -0.473578618355907 0.473578618355907 0.875402900597283 -0.47611112433642 -0.991898175700875 0.7935185405607 1.94412042437372 NA 0.473440629247995 -1.005250651143 1.30358310244996 2.47313278474752 0.306586708852998 -0.183952025311799 1.18546860756492 -0.878881898711927 -0.572295189858929 0.0613173417705995 0.490538734164796 -0.490538734164797 1.63512911388266 NA NA -0.44966050631773 0.490538734164796 NA NA -0.797125443017794 -0.388343164547131 0.572295189858929 NA 0.817564556941328 -1.79864202527092 -1.06283392402373 -1.98259405058272 0.265708481005931 0.306586708852998 -0.0613173417705996 0.654051645553062 -0.408782278470664 -0.0408782278470664 0.0613173417705995 0.102195569617666 -0.797125443017794 -0.797125443017794 -1.49205531641792 -0.756247215170728 -1.92127670881212 -1.30810329110612 -0.674490759476595 -1.14459037971786 -0.940199240482527 -0.122634683541199 0 NA -2.98411063283585 -0.735808101247195 NA NA NA NA 0.429221392394197 -0.327025822776531 -0.776686329094261 NA NA 1.75776379742385 -1.38985974680026 NA NA -2.41181544297692 -0.44966050631773 -0.470099620241263 0.183952025311799 0.858442784788394 0.367904050623597 -2.08478962020039 0.633612531629529 1.04239481010019 1.30810329110612 0.347464936700064 1.45117708857086 -0.531416962011863 0.654051645553062 0.306586708852998 -0.51097784808833 0.694929873400128 -0.245269367082398 1.30810329110612 1.32854240502966 0.531416962011863 -1.26722506325906 1.02195569617666 0.388343164547131 0.183952025311799 0.817564556941328 0.306586708852998 -0.817564556941327 -1.41029886072379 0.183952025311799 1.67600734172972 0.265708481005931 0.715368987323661 2.30961987335925 0.143073797464732 -2.63664569613578 NA -0.289067468347112 0.817288352699118 NA 0.741939835424255 -0.857000023805556 1.71400004761111 0.647511129097531 -3.16560996447682 0.953280273393588 0.44966050631773 1.07918521516255 0 NA 1.73021542648344 -0.1 0.473019493658911 0.683250379729538 0.665731139223652 0.245269367082398 -0.192711645564741 -0.192711645564741 0.911000506306051 0.245269367082398 -1.22634683541199 NA -0.637700354414235 -0.502802202518916 -0.183952025311799 0.159149505045039 -0.748034419622328 1.28628846759158 0 -0.89932101263546
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RV0963C NA NA NA NA -2.42203499993868 NA 1.42833337300926 1.03157410272891 -0.539592607581276 0.708215297450425 0.134898151895319 1.88857412653447 -0.539592607581276 NA NA NA NA NA NA -0.51042543960391 0.51042543960391 2.925 0.175 -0.275 -0.770846582258966 -0.0963558227823707 -0.0963558227823707 0.0321186075941236 0.321186075941236 0.674490759476595 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 1.17677111227832 0.674490759476595 NA -0.468396360747636 1.44533734173556 NA NA 0.182112505058681 -0.951031970861999 0.101173613921489 -1.89531903412923 -3.05544314042898 0.583343359547326 -0.583343359547325 -0.765638159405864 0.294008792592362 -0.57072295032635 1.15874053551107 0.795553203485215 NA NA NA NA 0.991898175700875 -1.2497917013831 -1.4680093000373 0.357083343252315 -0.912546321644805 -0.71416668650463 -0.892708358130788 0.198379635140175 NA NA NA NA NA 1.17043984732703 NA 0.198379635140175 2.08298616897184 -0.0198379635140175 -0.416597233794368 NA -0.31740741622428 NA -0.972060212186858 -1.68622689869149 0.416597233794368 0.654652795962578 0.55546297839249 NA 1.07125002975695 -0.039675927028035 0.495949087850438 0.753842613532665 -0.892708358130788 -0.654652795962578 -0.674490759476595 -0.595138905420525 -0.932384285158823 -0.535625014878473 -0.436435197308385 -1.38865744598123 -1.11092595678498 -1.82509264328961 -0.297569452710263 NA -4.26516215551376 NA NA NA 0.55546297839249 -0.674490759476595 -1.19027781084105 -0.674490759476595 -1.32914355543917 NA 0.436435197308385 NA -0.932384285158823 NA NA -1.21011577435507 -0.614976868934543 NA -0.376921306766333 -0.07935185405607 0.0991898175700875 -0.119027781084105 1.88460653383166 2.93601860007459 1.15060188381302 1.90444449734568 2.00363431491577 2.40039358519612 1.130763920299 1.5870370811214 1.94412042437372 0.833194467588735 1.40849540949524 2.63844914736433 0.95222224867284 1.2497917013831 -1.15060188381302 -0.0991898175700875 1.09108799327096 0.833194467588735 1.21011577435507 0.495949087850438 -1.07125002975695 -1.11092595678498 0.654652795962578 0.47611112433642 1.07125002975695 0.87287039461677 0.277731489196245 0.0991898175700875 -2.63844914736433 NA 0.875108523833736 NA -1.63711349387523 0.347464936700064 -1.40086542352831 0.622606854901473 NA NA NA NA NA -0.45 -0.893244519306842 0.674490759476595 -0.117302740778538 0.518839045751227 0.0259419522875614 0 0.0259419522875614 -0.0259419522875614 -0.0259419522875614 0.415071236600982 -0.103767809150245 -1.43958475530079 -0.412748076694633 -0.614088601911527 -0.51341833930308 -0.654356706954906 NA -0.0192090049999999 1.6140030220075 2.02347227842978 -0.337245379738298
RV0987 -0.907073779985766 -0.39539113486559 -0.348874530763756 0.627974155374761 -0.581457551272927 NA 0 0.119027781084105 NA 0.487132215177541 0.224830253158865 0.786905886056028 NA NA NA NA NA NA NA 0.490538734164797 -0.490538734164797 2.875 -0.625 -0.0749999999999999 -1.21179695770371 0.754515086872123 0.617330525622646 0.297233216040533 0.0685922806247385 0.583343359547326 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA -1.16859445537224 0.682333675284463 0.682333675284463 NA 0 0.15 NA NA -0.184860430375067 -0.159879291135193 0.674490759476595 -0.984256886051031 -0.989253113899006 1.46480316451988 -0.619986455680506 -0.728995063272684 0.212339683538928 -0.974264430355082 1.0492078480747 -0.324754810118361 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA -0.299773670878487 NA -1.16502949364139 0.961773860735145 -1.4901540034948 1.15552292902579 NA NA NA NA NA -0.45 -0.849358734155713 NA NA NA NA NA NA NA NA NA NA -1.74194570056129 0.334312811218834 -1.09678062627933 -1.50734021900422 -0.205279796362442 NA NA NA 0.499999999999999 -0.5
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RV1740 -0.674490759476595 -0.0963558227823707 -3.79641941762541 -0.674490759476595 0.16280811435642 0.705149430361895 1.4 0.9 0.160593037970618 0.160593037970618 0.546016329100101 1.0920326582002 -0.0963558227823707 -1.07816325946638 -0.689820094919245 0.659161424033945 1.32343262654877 -0.321916044295648 -0.189061803792682 NA NA 0.625 -0.175 -1.375 -1.43073797464732 0.367904050623597 -0.163512911388265 0.388343164547131 -0.0817564556941328 -0.0374717088598109 -0.9876471835193 -0.0240889556955927 -0.168622689869149 NA NA 1.3248925632576 1.73440481008267 1.08400300630167 NA NA -0.144533734173556 0.0240889556955927 NA NA -0.963558227823707 -0.168622689869149 NA NA NA NA NA -1.01173613921489 NA -0.337245379738298 -0.650401803781003 -1.90302749995182 NA NA -1.61396003160471 -0.192711645564741 -1.44533734173556 NA NA NA 0.481779113911854 0.0722668670867781 0.481779113911854 -0.192711645564741 -0.602223892389817 -1.37307047464878 NA 2.89067468347112 0.0481779113911854 NA NA NA NA NA -1.92711645564741 -1.85484958856064 NA -1.54169316451793 -0.409512246825076 0.554045980998632 NA -1.34898151895319 -1.0492078480747 0.131150981009338 1.59254762654196 -1.25530224680366 0 0.05 -0.963558227823707 0.289067468347112 0.479457286856857 -0.0243791840774673 -0.804513074556421 -0.235665446082184 0.950788179021225 1.64976793871978 -0.8112118593705 -0.537769659582691 0.337245379738298 -0.974264430355082 -0.262301962018676 -0.149886835439243 0.0532492704849944 0.354995136566629 -1.11823468018488 0.461493677536618 0.286147594929465 -0.735808101247195 -0.0204391139235332 0.388343164547131 0.0408782278470664 0.0613173417705996 -0.224830253158865 0.265708481005931 -0.327025822776531 0.347464936700064 0.572295189858929 -0.0817564556941328 -0.0408782278470664 0.102195569617666 -0.0408782278470664 0.245269367082398 0.756247215170728 -0.981077468329593 -0.858442784788394 -1.00151658225313 -0.776686329094261 -0.122634683541199 -0.163512911388266 -0.286147594929465 0.981077468329593 1.16502949364139 1.12415126579433 0 0.102195569617666 -0.531416962011863 -0.388343164547131 0.102195569617666 0.0613173417705996 -0.96063835440606 -1.18546860756493 -0.531416962011863 -0.306586708852998 -0.858442784788394 -1.04239481010019 -0.347464936700064 -0.306586708852998 -1.98259405058272 -1.22634683541199 -1.55337265818852 -1.96215493665919 -0.694929873400128 1.10371215187079 NA -0.0204391139235332 -0.89932101263546 -0.981077468329593 0.265708481005931 -0.654051645553062 0.470099620241263 1.69644645565325 1.63512911388266 -1.12415126579433 -2.41181544297692 8.11432822764268 -1.02195569617666 -0.592734303782463 -2.47313278474752 -0.981077468329593 0.940199240482527 1.12415126579433 -0.776686329094261 2.10522873412392 1.85995936704152 1.24678594933552 0.122634683541199 0.735808101247195 0.878881898711927 1.88039848096505 0.347464936700064 0.44966050631773 1.55337265818852 1.26722506325906 2.28918075943572 0.96063835440606 0.551856075935396 0.756247215170728 0.490538734164797 0.429221392394197 0.183952025311799 0.245269367082398 0.572295189858929 0.102195569617666 -0.654051645553062 0.0817564556941327 -0.429221392394197 0.408782278470664 0.0408782278470664 0.919760126558994 0.388343164547131 0.572295189858929 -0.592734303782463 1.17217326161467 0.777840150041557 0 -0.122634683541199 -0.573317145555106 -0.326003867080354 -0.216800601260334 -0.939469272128115 0.554045980998632 0.0240889556955927 0.674490759476595 -1.37307047464878 NA -0.674490759476595 -0.44966050631773 NA NA NA NA NA NA NA NA NA -0.22982648100684 NA NA -0.779411544284065 NA -2.61218531 -0.323415127572374 -0.5 0
RV1741 -0.199030060173421 -0.464403473737984 -0.796120240693686 -0.862463594084827 -0.991088462904385 0.225 0.629524708844822 0.854354962003687 -0.831871936687801 0.247313278474752 1.43891362021674 1.3264984936373 -0.696973784792482 NA NA NA NA NA NA NA NA 0.675 0.025 0.025 -1.34898151895319 0.276714157733988 -0.172946348583742 1.45274932810344 0.553428315467976 0.469734636064057 -1.13737657480367 -0.87287039461677 0.42320988829904 NA NA 2.03669758743913 -0.02645061801869 0.44966050631773 NA NA 0.95222224867284 0.71416668650463 NA -5.21077174968193 -1.13737657480367 -0.87287039461677 NA NA NA -1.71929017121485 -1.66638893517747 NA 3.22697539828018 -0.68771606848594 -0.95222224867284 -3.09472230818673 NA NA NA NA -0.63481483244856 NA NA NA NA -0.02645061801869 1.53413584508402 -0.10580247207476 -1.16382719282236 -2.22185191356996 NA NA NA NA NA NA NA NA -2.3805556216821 -3.01537045413066 0 NA 0.42320988829904 0.18515432613083 NA -2.40700623970079 -0.498536648308788 0.32258253714098 0.879770555839037 -0.146628425973173 -0.152304365043102 1.15 -0.720478765804545 -0.0459880063279497 0.107527512380327 -0.537637561901634 0.967747611422941 -0.694041216273018 -1.20235309298002 2.07580345804435 -0.645417881912949 -0.703563637040241 -0.47611112433642 -2.81699081899049 0.833194467588735 0.31740741622428 NA NA -0.599547341756973 0.124905696199369 1.53057518496612 -0.778258568626841 -0.415071236600982 0.285361475163175 -0.285361475163175 -1.03767809150245 -0.518839045751227 0.38912928431342 -0.726374664051718 NA NA 1.06362004379002 NA 0.363187332025859 -0.700432711764156 1.68622689869149 0.311303427450736 -0.441013188888543 -0.95985223463977 NA -0.907968330064647 -0.596664902613911 -0.752316616339279 -1.45274932810344 0.752316616339279 0.596664902613911 0.311303427450736 NA 0.363187332025859 -0.0778258568626841 0 -0.311303427450736 0.907968330064647 -0.38912928431342 -1.73811080326661 -1.03767809150245 0.0778258568626841 -0.648548807189034 -1.55651713725368 -0.778258568626841 -0.492897093463666 -1.42680737581587 -1.11550394836514 -4.98085483921178 -1.91970446927954 -1.78999470784173 NA NA NA -1.478691280391 -1.21927175751538 -0.0518839045751227 -1.06362004379002 0.726374664051718 0.544780998038788 0.648548807189034 -0.804200520914402 NA 4.48795774574811 -1.06362004379002 -0.674490759476595 -1.66028494640393 -1.27115566209051 0.259419522875614 0.155651713725368 -1.1414459006527 1.86782056470442 2.12724008758003 0.985794186927331 1.16738785294026 -0.181593666012929 1.24521370980294 1.37492347124075 1.478691280391 2.36071765816808 2.07535618300491 NA 3.37245379738298 1.84187861241686 1.91970446927954 -0.492897093463666 0.0259419522875614 0.648548807189034 0.0259419522875614 0.363187332025859 0 -0.207535618300491 -1.21927175751538 0.18159366601293 0.907968330064647 0.518839045751227 1.21927175751538 0.57072295032635 0.155651713725368 -1.97158837385466 -0.674490759476595 0.778989327846209 1.01605979792949 -0.436435197308385 0.975 -0.979617531620769 -0.27300816455005 0.974264430355082 -0.674490759476595 0.404694455685957 0.0149886835439243 1.00424179744293 -0.1 -1.33253052481961 1.05286362454883 -0.485633346823149 NA NA NA NA NA NA NA NA NA -0.137543213697188 -0.74061730452332 -0.756487675334534 -0.513141989562586 NA -0.674490759476595 0 0 0
RV1742 -0.969580466747606 -0.379401052205585 0 -2.61365169297181 -1.06613055530171 0.0249999999999995 0 1.65 -1.16162297465414 0 0.824377594915839 1.7236986075513 -1.61128348097187 NA NA NA NA NA NA -0.826795124519697 0.826795124519697 1.925 -0.925 -0.025 0.303520841764468 0.640766221502766 -0.101173613921489 -0.101173613921489 -0.809388911371914 1.75367597463915 -0.85198832775991 -0.141998054626652 -0.177497568283315 NA NA 1.5264790872365 1.84597471014647 0.780989300446584 NA NA -0.106498540969989 0.106498540969989 NA -4.93443239827614 -0.319495622909966 -0.212997081939977 NA -2.09447130574311 NA -2.2009698467131 NA NA 6.38991245819932 -1.2424829779832 -0.496993191193281 -2.09447130574311 NA NA NA -0.0354995136566629 -0.922987355073235 NA NA NA 0.106498540969989 0.638991245819932 -0.0354995136566629 -1.31348200529653 -0.141998054626652 -1.13598443701321 NA NA 1.63297762820649 NA NA NA NA NA -1.66847714186316 -3.62095039297962 0.0354995136566629 NA -1.13598443701321 -0.177497568283315 NA -1.38448103260985 NA 1.21011577435507 0.357083343252315 -0.138865744598123 0.306586708852998 1.12415126579433 -0.15 0.4 -1.74112730934656 -0.815663244018208 0.125486652925878 -3.35676796576724 -3.74891375616061 1.99073000855228 -0.759620661158107 -0.589360857795083 0.35 -4.15 1.4 0.6 -0.581457551272927 2.10099995193284 -1.72886711911817 -0.131797044955197 1.10048492335655 -0.496993191193281 NA -0.106498540969989 -0.390494650223292 -1.17148395066988 -0.745489786789921 0.283996109253303 -0.567992218506606 0.709990273133258 1.2424829779832 0.0354995136566629 0.0354995136566629 0.0709990273133259 -0.780989300446584 0.141998054626652 0.0709990273133259 0.0709990273133259 -0.461493677536618 -1.73947616917648 -0.567992218506606 -0.212997081939977 0.461493677536618 -0.106498540969989 0.496993191193281 0.603491732163269 -0.141998054626652 0.354995136566629 0.674490759476595 0.425994163879955 0.390494650223292 -0.177497568283314 -0.354995136566629 -0.390494650223292 -1.49097957357984 -0.674490759476595 0.532492704849944 0.24849659559664 -1.13598443701321 -0.745489786789921 -0.674490759476595 -1.20698346432654 -0.887487841416573 -2.30746838768309 -2.37846741499641 -1.20698346432654 1.9169737374598 NA 0.922987355073235 -0.461493677536618 -2.16547033305644 0.0709990273133259 -1.17148395066988 1.13598443701321 0.674490759476595 1.45548005992318 -0.993986382386561 -3.47895233835296 3.40795331103964 -0.567992218506606 -0.177497568283314 -3.62095039297962 -1.9169737374598 0.212997081939977 0.354995136566629 -0.638991245819932 1.31348200529653 3.51445185200963 3.19495622909966 2.4849659559664 3.76294844760627 NA 1.88147422380313 1.84597471014647 1.49097957357984 1.73947616917648 2.76896206521971 6.28341391722933 2.16547033305644 0.496993191193281 -1.66847714186316 0.177497568283315 1.20698346432654 1.06498540969989 1.41998054626652 0.887487841416573 NA -0.390494650223292 0.354995136566629 0.141998054626652 1.52647908723651 1.34898151895319 1.2424829779832 0.354995136566629 -1.70397665551982 0.709990273133258 0.458144666814291 0 -1.27584396672079 0.138357078866994 0.045728187083159 1.85199157686794 0.654940302680172 -1.26100446336929 0.439885277919519 0.205279796362442 1.08505035220148 0 NA 0.1 0.025 NA NA NA NA NA NA NA NA -1.5469663687498 -0.365768620810691 -1.84897715657514 NA -0.714758864519974 NA -0.04838703 0.4075 0.843113449345744 -0.168622689869149
RV1917C -0.674490759476595 -0.775664373398084 -0.607041683528936 -0.438418993659787 -0.775664373398085 NA 0.45 0.2 -0.912546321644805 -0.15870370811214 0.436435197308385 0.277731489196245 -2.10282413248586 NA NA NA NA NA NA -0.623903952515851 0.623903952515851 1.65 0.05 -0.15 -0.605665171774902 0.798376817339643 0.0825907052420321 0.688255877016934 0.110120940322709 0.706609367070719 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 0.23805556216821 -1.10048492335655 0.709990273133258 -1.86082911657018 -0.837133921336199 0.937589991896544 -0.803648564482752 -1.86561273897782 NA NA NA 0.17113944643436 -0.936233442258558 1.72146149060444 -0.0100670262608447 NA NA NA NA 2.02347227842979 -0.78327959165024 -0.130546598608373 0.543944160868222 -0.19581989791256 0.761521825215511 0.239335430782018 0.609217460172409 0.19581989791256 NA NA NA NA 1.02261502243226 -0.652732993041866 2.15401887703816 -0.19581989791256 -0.652732993041866 -0.0870310657389155 NA -1.41425481825738 -0.0435155328694578 -0.39163979582512 0.348124262955662 0.39163979582512 0.565701927302951 0.239335430782018 NA 1.00085725599753 0.500428627998764 0.870310657389155 1.24019268677955 -1.283708219649 -0.348124262955662 -1.63183248260467 -1.08788832173644 -0.217577664347289 -0.848552890954426 -1.89292567982141 -1.91468344625614 -1.8058946140825 -2.32808100851599 -0.805037358084969 -3.0896028337315 -2.30632324208126 0.0870310657389155 NA 2.48038537355909 0.674490759476595 NA -1.17491938747536 -1.26195045321428 -0.892068423823884 NA 0.500428627998764 NA -0.718006292346053 -2.1105033441687 NA -2.15401887703816 -0.217577664347289 -1.74062131477831 -1.21843492034482 0.543944160868222 0.913826190258613 -1.02261502243226 1.93644121269087 0.913826190258613 0.282850963651475 0.892068423823884 1.45777035112683 1.283708219649 0.0652732993041866 0.739764058780782 0.39163979582512 -0.435155328694578 0.630975226607137 1.71886354834358 0.674490759476595 1.10964608817117 -2.63268973860219 0.282850963651475 1.04437278886699 1.39249705182265 0.174062131477831 0.543944160868222 -0.58745969373768 -1.00085725599753 0.522186394433493 -0.174062131477831 0.739764058780782 0.0217577664347289 0.239335430782018 0.304608730086204 -0.609217460172409 NA 0.666555574070988 0.417891014023543 NA 0.62358579649723 -1.14398922930834 0.654652795962578 0.408782278470664 -1.55337265818852 0.347464936700064 0.347464936700064 -0.0817564556941328 0 -1.72210406674875 1.77950753564038 -0.130546598608373 0.696726718580219 0.400247263865232 0.370599318393734 0.415071236600982 0.385423291129483 0.518839045751227 -0.0444719182072481 0.652254800372971 0.236071765816808 -0.539592607581276 -0.0224830253158865 0.269796303790638 -0.292279329106525 NA -0.709122598135406 0.0463712397140159 1.34898151895319 -1.34898151895319
[+] Show/hide bicluster #235 motif PSSM #1. bicluster 235 motif PSSM #1 Mycobacterium tuberculosis H37Rv 24x4
POSITION A C G T
1 0 0.4 0 0.6
2 0 0 0.6 0.4
3 0 0 1 0
4 0.4 0 0.5 0.1
5 0.1 0.6 0.2 0.1
6 0 0.2 0.7 0.1
7 0.7 0 0.3 0
8 0 0 0.8 0.2
9 0.2 0 0.2 0.6
10 0 0.1 0 0.9
11 0.1 0.5 0.4 0
12 0.4 0 0 0.6
13 0.9 0 0 0.1
14 0.1 0 0.8 0.1
15 0.6 0.2 0.2 0
16 0.5 0.4 0.1 0
17 0.4 0.2 0.2 0.2
18 0.1 0 0.2 0.7
19 0.5 0.1 0.2 0.2
20 0.4 0.3 0.3 0
21 0 0.1 0.1 0.8
22 0 0.4 0.4 0.2
23 0.4 0 0.2 0.4
24 0.7 0.2 0.1 0 [+] Show/hide bicluster #235 motif PSSM #2. bicluster 235 motif PSSM #2 Mycobacterium tuberculosis H37Rv 15x4
POSITION A C G T
1 1 0 0 0
2 0 0 1 0
3 0 0 1 0
4 1 0 0 0
5 0 0 0 1
6 0 0 0 1
7 0 1 0 0
8 0 0 0 1
9 1 0 0 0
10 0 0 0 1
11 1 0 0 0
12 1 0 0 0
13 1 0 0 0
14 0 0 1 0
15 1 0 0 0 |