|
[+] Show/hide bicluster #241 rows and columns.
bicluster 241
Mycobacterium tuberculosis H37Rv
6x234
[+] Show/hide bicluster #241 rows (genes).
bicluster 241 genes
Mycobacterium tuberculosis H37Rv
6
[+] Show/hide bicluster #241 rows (short gene names).
bicluster 241 short names
Mycobacterium tuberculosis H37Rv
6
short_name
[+] Show/hide bicluster #241 rows (long gene names).
bicluster 241 long names
Mycobacterium tuberculosis H37Rv
6
long_name
[+] Show/hide bicluster #241 rows (NCBI RefSeq gene IDs).
bicluster 241 NCBI RefSeq IDs
Mycobacterium tuberculosis H37Rv
12
[+] Show/hide bicluster #241 gene upstream sequences.
bicluster 241 upstream sequences
Mycobacterium tuberculosis H37Rv
6
upstream
[+] Show/hide bicluster #241 columns (arrays; conditions).
bicluster 241 arrays
Mycobacterium tuberculosis H37Rv
234
[+] Show/hide bicluster #241 ratios.
bicluster 241 ratios
Mycobacterium tuberculosis H37Rv
6x234
GENES 2867:::H37Ra..7H9.roll.replicate.4 2867:::H37Ra..7H9.shake.replicate.2 2867:::H37Ra..7H9.shake.replicate.4 2867:::H37Ra..Dubos.media.replicate.1 2867:::H37Ra..Dubos.media.replicate.2 2867:::H37Ra..Youman.media.replicate.1 2867:::H37Ra..Youman.media.replicate.3 2867:::H37Rv..7H9.shake.replicate.1 2867:::H37Rv..7H9.shake.replicate.3 2867:::H37Rv..Dubos.media.replicate.1 2867:::H37Rv..Dubos.media.replicate.4 2867:::H37Rv..Sauton.s.media.replicate.4 2885:::H37Rv..7H9.roll.replicate.1 2885:::Strain.1006...replicate.3 2885:::Strain.3160..replicate.4 2885:::Strain.9802826..replicate.2 4060:::H37Rv.wild.type.Vs.H37Rv.sigE.null.mutant.rep.2 4062:::CDC1551.Ctrl.vs.0.05.mM.DETA.NO.40.min.rep.2 4062:::H37Rv.ctrl.vs.Rv3132.34.KO..complemented...0.05.mM.DETA.NO.40min.rep.2 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.1hr.rep.1 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.24hrs...0.5.mM.DNO.40min.rep.1 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.40min.rep.3 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.8hrs.rep.4 4062:::MTB.strain.1254.Ctrl.vs.5.0.mM.DETA.NO.40min.rep.4 4068:::H37Rv.delta.mprAB.mutant.vs..H37Rv.delta.mprAB.mutant.SDS.treated.rep.3 4068:::H37Rv.SDS.treated.vs..H37Rv.delta.mprAB.mutant.SDS.treated.rep.2 4068:::H37Rv.vs..H37Rv.SDS.treated.rep.6 4084:::High.iron.wt.vs.high.iron.ideR.Complement.1b 4089:::H37Rv.whiB7.null.ethanol.vs..1.0.ug.ml.Tetracyclin.for.2.hr.rep.4 4089:::H37Rv.whiB7.null.vs..H37Rv.whiB7.null.with.whiB7.over.expression.rep.4 4089:::H37Rv.wild.type.vs..H37Rv.whiB7.null.rep.6 4089:::H37Rv.wild.type.vs..H37Rv.whiB7.null.with.whiB7.over.expression.rep.4 4089:::MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.24.hr..ref..rep.2 4089:::MTB1254.control.vs..100.ug.ml.Streptomycin.for.15.min.rep.4 4089:::MTB1254.control.vs..5.0.ug.ml.Streptomycin.for.15.min.rep.2 4089:::MTB1254.ethanol.vs..1.0.ug.ml.Erythromycin.for.30.min.rep.3 4089:::MTB1254.ethanol.vs..100.ug.ml.Tetracyclin.for.30.min.rep.1 4089:::MTB1254.ethanol.vs..5.0.ug.ml.Erythromycin.for.15.min.rep.3 4089:::MTB1254.ethanol.vs..5.0.ug.ml.Tetracyclin.for.15.min.rep.1 4099:::H37.Rv3133c.DosR.mutant.2hr.rep.2 4100:::H37Rv.0.2..Oxygen..2h..1 4101:::H37Rv.Day14.3 4101:::NRP.Day14..5 4107:::DIPED..100ug.mL..DMSO..12h..3 4107:::DIPED.50ug.mL.vs.DMSO.12h.1 4107:::Mtm.0.2ug.mL.vs.ctrl.8h.2 4107:::PBS.Tween.7H9 4107:::pH4.8vspH6.8..4h. 4107:::pH4.8vspH6.8..4h.A 4107:::pH4.8vspH6.8..4h.C 4107:::pH5.6vspH6.8..2h.A 4107:::UV.40J.vs.ctrl.12h.1 4107:::UV.60J.vs.ctrl.6h.1 4107:::X0.02mM.GSNOvsDMSO..6h 4107:::X0.05mM.Palmitate.10mM.Gluc..1 4107:::X0.12mg.mL.BZA.pH5.6..4h..2 4107:::X0.12mg.mL.BZAvspH5.6..5h. 4107:::X0.12mg.mL.Nam.pH5.6..2h..1 4107:::X0.12mg.mL.Nam.pH5.6..4h..1 4107:::X0.12mg.mL.NamvspH5.6..4h. 4107:::X0.12mg.mL.PZA.pH5.6..2.5h. 4107:::X0.12mg.mL.PZA.pH5.6..2h. 4107:::X0.12mg.mL.PZA.pH5.6..4h..2 4107:::X0.15mg.mL.TricvsEtOH..6hA 4107:::X0.1mM.GSNO.DMSO..6h 4107:::X0.1mM.GSNOvsDMSO..4h 4107:::X0.1mMGSNO.5ug.mLKCNvsDMSO.6h.A 4107:::X0.2mM.NaN3.DMSO 4107:::X0.2ug.mL..111891.DMSO..5.5h..2 4107:::X0.2ug.mL.Mtm.ctrl..4h...1 4107:::X0.2ug.mL.Mtmvsctrl..2h.C 4107:::X0.2ug.mL.PA824.DMSO..6h..1 4107:::X0.2ug.mL.PA824.DMSO..6h..2 4107:::X0.2ug.mL.RifvsDMSO..6hA 4107:::X0.4mM.NaN3.DMSO 4107:::X0.4mM.NaN3vsDMSO..4h 4107:::X0.4ug.mL.PA824.DMSO..6h..3 4107:::X0.4ug.mL.PA824.DMSO..6h..4 4107:::X0.5ug.mL..124196vsDMSO..6h 4107:::X0.5ug.mL..124196vsDMSO..6hA 4107:::X0.5ug.mL.CeruleninvsDMSO..6hB 4107:::X1.2mg.mL.NamvspH5.6..5h. 4107:::X1.2mg.mL.PZAvspH5.6..4h.B 4107:::X1.2mg.mL.PZAvspH5.6..7h. 4107:::X1.2mg.mL.PZAvspH5.6..7h.A 4107:::X100ug.mL.Cephalexin.Ctrl..6h 4107:::X100ug.mL.TriclosanvsEtOH..6hA 4107:::X100ug.mLCephalexinvsEtOH.6h 4107:::X100uM.DCCD.DMSO..6h 4107:::X10ug.mL..59vsDMSO..6hA 4107:::X10ug.mL.ClotrimvsEtOH..6hA 4107:::X13ug.mL.clfzine.DMSO..6h..2 4107:::X1ug.mL..109vsDMSO..6h 4107:::X1ug.mL..111895vsDMSO..6h 4107:::X1ug.mL..121940.DMSO..12h 4107:::X20ug.mL.ethambutol.DMSO 4107:::X25ug.mL.CPZvsDMSO..6h.A 4107:::X25ug.mL.CPZvsDMSO..6h.B 4107:::X25ug.mL.TRZ.DMSO..6h 4107:::X2mM.ZnSO4.DMSO..6h 4107:::X40ug.mL.5CL.pH5.6..4h..3 4107:::X40ug.mL.EtavsEtOH..6hA 4107:::X4mM.H2O2.ctrl..2h...1 4107:::X4mM.H2O2.ctrl..2h...2 4107:::X4mM.H2O2.ctrl..4h...1 4107:::X4mM.H2O2vsctrl..4h.A 4107:::X50ug.mL.Thioridazine.DMSO..6h 4107:::X50ug.mL.TriclosanvsEtOH..6h 4107:::X5ug.mL.CFZ.0.1mM.GSNO.DMSO..1 4107:::X5ug.mL.CFZ.0.1mM.GSNO.DMSO..2 4107:::X5ug.mL.KCN.DMSO..6h..2 4107:::X5ug.mL.TetvsEtOH..6h 4363:::H37Rv.hypoxia.1.day.rep.5 4363:::H37Rv.hypoxia.1.day.rep.6 4363:::H37Rv.hypoxia.4hr.rep.6 4363:::H37Rv.hypoxia.4hr.rep.7 4363:::H37Rv.hypoxia.8hr.rep.3 4364:::H37dosR.mutant.hypoxia.1.day.rep.1 4364:::H37dosR.mutant.hypoxia.12hr.rep.3 4364:::H37dosR.mutant.hypoxia.7.day.rep.1 4396:::H37Rv.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.2 4396:::H37Rv.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.3 4396:::Strain.27.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.2 4396:::Strain.27.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.1 4396:::Strain.32.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.1 4396:::Strain.32.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.3 4396:::Strain.49.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.2 4489:::MTB1254.WT.vs.Rv3662c.3665c.KO.in.7H9OADC..OD.1.0.2 4523:::H37Rv.sigB.null.mutant.control.vs.0.05..SDS.for.60.min.rep.4 4570:::MTB.strain.TB294.Ctrl.vs.SigA.overexpression.rep2 4570:::MTB.strain.TB294.SigA.overexpression.va.Ctrl.DS..rep1 4570:::MTB.strain.TB294.SigA.overexpression.vs.Ctrl..DS..rep2 4575:::Whole.Lung.Surfactant.30min.rep.2 4581:::H37Rv.Ctrl.vs.2.ug.ml.garlic.extract.6hrs.rep2 4583:::X0.4ug.ml.PA.824.vs.DMSO.6hrs.rep.3 4583:::X20ug.ml.KCN.vs.DMSO.6hrs 4583:::X2ug.ml.PA.824.vs.DMSO.6hrs.rep.2 4583:::X40ug.ml.Ethionamide.vs.Ethanol.6hrs.rep.1 4599:::H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.2 4599:::H37Rv.vs.SigE.mutant.24hrs.after.macrophage.infection.rep.2 4599:::H37Rv.wild.type.vs.sigE.mutant.in.7H9.media..DS..rep.2 4599:::SigE.mutant.grown.in.7H9.vs.24hrs.after.infection.in.macrophages.rep.1 4615:::AA_30uM_2h_05 4615:::AA_30uM_2h_08 4615:::AA_30uM_4h_01 4615:::Acetate.3mM.30m.01 4615:::Acetate.3mM.60m.04 4615:::C2_ceramide_25uM_1h_01 4615:::CHP_25uM_1h_01 4615:::CHP.AA.2h.1 4615:::CHP.AA.4h.1 4615:::CK_LA_2h 4615:::CK.for.OA.NA..2h 4615:::ETYA_10uM_1h_02 4615:::L2A_30uM_1h_05 4615:::MTB1254_Bottom_14D_02 4615:::MTB1254_Bottom_14D_04 4615:::MTB1254_Pellicle_21D_04 4615:::MTB1254.0485.1._LA_10m_01 4615:::MTB1254.0485.1._PA_10m_02 4615:::MTB1254.B4.1._PA_30MIN_04 4615:::OA_100uM_2h_T0_01 4615:::OA_50uM_30min_02 4615:::OA_50uM_30min_03 4615:::OA_50uM_4h_02 4615:::OA50um_10min.10mM_G_20min 4615:::PA_100uM_2h_T0_05 4615:::PA_300uM_2h_T0_01 4615:::PA_50uM_10min_07 4615:::PA_50uM_10min_09 4615:::PA_50uM_1h_10 4615:::PA_50uM_30.min_04 4615:::PA_50uM_30min_02 4615:::PA_50uM_30min_08 4615:::PA_50uM_4h_05 4615:::Starvation_1254_24h_02 4615:::Starvation_1254_5d_01 4615:::Starvation_1254_PA50.OA30_24h_01 4615:::TBD044 4615:::TBE283 4615:::TBE733 4615:::Test.G.OA 4615:::Tet_500ng_30M_01 4615:::X2.BA_100uM_30min_01 4696:::H37Rv.wt.vs.dosS.dosT.null.anaerobic.Gaspak.4hr.rep.1 4696:::H37Rv.wt.vs.dosS.dosT.null.anaerobic.Gaspak24hr.rep.3 4696:::H37Rv.wt.vs.dosS.dosT.null.rapid.anaerobic.dormancy.day.6.rep.1 4696:::H37Rv.wt.vs.dosS.null.anaerobic.Gaspak.24hr.rep.1 4696:::H37Rv.wt.vs.dosS.null.anaerobic.Gaspak.24hr.rep.2 4696:::H37Rv.wt.vs.dosS.null.nitric.oxide.treatment.1hr.rep.1 4696:::H37Rv.wt.vs.dosT.null.anaerobic.Gaspak24hr.rep.2 4696:::H37Rv.wt.vs.dosT.null.nitric.oxide.treatment.1hr.rep.1 4699:::CDC1551.Ctrl.vs.clinical.isolate.1797.03_EAI.rep.3 4699:::CDC1551.Ctrl.vs.clinical.isolate.2169.99_Uganda.rep.2 4699:::CDC1551.Ctrl.vs.clinical.isolate.2333.99_Uganda.rep.1 4699:::CDC1551.Ctrl.vs.clinical.isolate.4850.03_EAI.rep.3 4703:::Clinical.isolate.4850.03_EAI.extra.vs.intracellular.in.resting.macrophages.rep.2 4703:::Clinical.isolate.9532.03_Haarlem.extra.vs.intracellular.in.resting.macrophages.rep.2 4704:::CDC1551.extra.vs.intracellular.in.activated.macrophages.rep.1 4704:::Clinical.isolate.10517.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.1 4704:::Clinical.isolate.1500.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.1 4704:::Clinical.isolate.1500.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.2 4704:::Clinical.isolate.1934.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.2 4704:::Clinical.isolate.2336.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.1 4704:::Clinical.isolate.9532.03_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.2 4704:::H37Rv.extra.vs.intracellular.in.activated.macrophages.rep.1 4729:::H37Rv.wild.type.vs.PepD.null.mutant.rep.1 4729:::H37Rv.wild.type.vs.PepD.null.mutant.rep.2 4735:::BCG.wild.type.vs.BCG.with.pMFdosR.at.OD.0.4.rep.3 4795:::CDC1551.ctrl.vs.10.ug.ml.Thioridazine.1hr.rep.1 4795:::CDC1551.ctrl.vs.10.ug.ml.Thioridazine.1hr.rep.2 4795:::CDC1551.ctrl.vs.40.ug.ml.Thioridazine.4hr.rep.1 4795:::CDC1551.ctrl.vs.40.ug.ml.Thioridazine.6hr.rep.1 4799:::H37Rv.ctrl.vs.1ug.ml.Isoniazid.for.6hrs.rep.2 4799:::H37Rv.KatG.null..ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.1 4799:::H37Rv.nutrient.starved..ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.2 4802:::H37Rv.ctrl.vs.relE1.overexpression.6.hr.rep.1 4802:::H37Rv.ctrl.vs.relE1.overexpression.6.hr.rep.2 4802:::H37Rv.ctrl.vs.relE1.overexpression.6.hr.rep.4 4802:::H37Rv.ctrl.vs.relE2.overexpression.24.hr.rep.1 4802:::H37Rv.ctrl.vs.relE2.overexpression.24.hr.rep.2 4815:::H37Rv.reaeration.for.1hrs.rep.8 4815:::H37Rv.reaeration.for.24hrs.rep.3 4815:::H37Rv.reaeration.for.6hrs.rep.2 4815:::H37Rv.reaeration.for.6hrs.rep.4 4860:::CDC1551.nadABC.null.nicotinamide.starvation.rep.1 4860:::CDC1551.nadABC.null.nicotinamide.starvation.rep.2 4860:::M..bovis.nadABC.null.nicotinamide.starvation.rep.2 4860:::M..bovis.nadABC.null.nicotinamide.starvation.rep.3 4928:::Mtb.Erdman.strain.200.ppm.CO.rep.2 Provvedi_Microbiology2009:::H37Rv.Control.vs.400.ug.ml.vancomycin.for.1.hr.rep.1 Raghavan_Nature2008:::ESPR..mutant..R...rep3 Schnappinger_JEM2003:::MTB.in.Wild.type.macrophages...IFNg.for.4hrs Schnappinger_JEM2003:::MTB.in.Wild.type.macrophages.for.4hrs
RV0182C 0.433601202520668 -0.337245379738298 0 0.433601202520668 0.722668670867781 -1.25262569617082 -2.98703050625349 -0.144533734173556 0.529957025303039 -1.25262569617082 1.30080360756201 -0.144533734173556 0.524603924037352 -1.32400037971332 0.224830253158865 -0.324754810118361 -1.68622689869149 0.472143531633617 -0.404694455685957 0.134898151895319 1.95602320248213 -0.202347227842979 4.65398624038851 0.640766221502765 NA NA NA 0 -0.63481483244856 -1.90444449734568 -0.55546297839249 -0.595138905420525 -0.436435197308385 1.07125002975695 0.595138905420525 0.39675927028035 -2.261527840598 1.26962966489712 0.63481483244856 -0.947157236711815 0.35 -0.299773670878487 0.936792721495271 0.266659137467491 2.02347227842979 0.925464065328352 0.298030800698961 0.674490759476595 0.768605749171004 0.674490759476595 0.925464065328352 0.580375769782187 0.580375769782187 -2.83913552244799 NA 0.549004106550717 1.33329568733746 1.0823223814857 0.768605749171004 0.737234085939534 0.831349075633943 0.454889116856308 0.392145790393369 0.141172484541613 -2.49404722690183 NA NA -0.768605749171004 NA 0.956835728559821 1.8038706358095 NA NA 1.8038706358095 NA -2.9332505121424 NA NA -0.109800821310143 -0.0784291580786738 0.517632443319248 0.517632443319248 0.0156858316157348 -0.298030800698961 0.611747433013656 NA 0.862720738865413 -0.298030800698961 NA -0.549004106550717 -0.32940246393043 NA -0.549004106550717 1.30192402410599 NA NA NA NA NA NA 1.70975564611509 -1.64701231965215 -0.392145790393369 0.392145790393369 0.831349075633943 2.99599383860534 NA 0.0156858316157348 -1.11369404471717 -1.42741067703186 NA -0.737234085939534 0.978234942552148 1.38024930250509 -0.0670023933254896 -0.692358064363392 -0.674490759476595 1.74159554312613 -1.29864638764897 1.76172959564782 NA NA NA NA NA NA NA -0.05 -0.24849659559664 NA NA NA -0.579370267755537 -0.650401803781003 NA NA -0.395896750127567 -0.278594009349028 NA 1.18923370749821 -1.33123176212486 2.43171668548141 -1.48387967084851 NA NA -0.269796303790638 -0.192711645564742 -1.83076063286504 -1.34898151895319 NA -0.886473569597811 -0.520321443024802 -1.00210055693666 NA 0.154169316451793 -1.23335453161435 -1.15626987338845 -0.79011774681544 -1.21408336705787 -2.71723420246286 -1.34898151895319 NA 0.905744734154285 -0.732304253146018 0.211982810121216 0.655219594920121 NA -1.67659131641325 -0.250525139234164 -1.46460850629204 NA NA -1.13699870883197 NA 1.13699870883197 1.42606617717909 2.33181091133337 0.655219594920121 -0.385423291129483 -1.86930296197799 -1.32971035439672 NA 0.423965620242431 NA -0.288402945431372 0.674490759476595 -1.70250771012713 -0.325616228712839 1.21873502746805 -0.516334305530359 1.98625899514832 -0.413997776506324 0.55546297839249 -0.15870370811214 -1.24317904687843 -0.10580247207476 0.934450739691533 0.8220356131121 -0.18159366601293 -0.00864731742918712 -2.37801229302646 0.942557599781396 0.907968330064647 -1.99753032614222 0.198888300871304 -2.53366400675183 NA NA NA 0.484790233373803 NA 0.274011871037367 -0.927424794280318 NA NA NA NA NA NA NA NA -0.793898214503552 1.38125380409561 0.561537761478122 -0.471175363079344 0.862951412859761 0.0793518540560699 -0.486030106093429 -1.33906253719618 0.75 NA 3.01 -0.843113449345744 -1.51760420882234
RV0550C NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA -0.306586708852998 -0.269796303790638 -0.573317145555106 -0.303520841764468 0.202347227842979 1.31525698097936 1.98974774045596 2.46189127208957 0.689733488504315 -1.75672452044469 0.529684833713258 -0.578134936694224 -0.0613173417705995 -1.41029886072379 -1.93149626577389 -1.53293354426499 2.88191506321818 1.22634683541199 0.0919760126558993 0.214610696197099 -0.0613173417705995 0.429221392394197 -0.551856075935396 -1.50957455692381 0.907073779985766 NA 0.345892697167485 0.638991245819932 1.63297762820649 1.2424829779832 NA 0.0354995136566629 1.02948589604322 0.0354995136566629 0.922987355073235 0.958486868729898 1.17148395066988 -4.29544115245621 NA 0.780989300446584 0.674490759476595 0.425994163879955 0.993986382386561 0.816488814103247 0.603491732163269 0.24849659559664 0.993986382386561 0.177497568283315 NA NA NA -1.88147422380313 NA 0.638991245819932 1.06498540969989 NA -0.887487841416573 0.425994163879955 NA NA NA -2.91096011984636 -0.24849659559664 -0.0354995136566629 0.780989300446584 1.10048492335655 2.30746838768309 0.745489786789921 0.496993191193281 NA 2.59146449693639 -0.425994163879955 NA -0.212997081939977 -0.532492704849943 NA -1.06498540969989 0.709990273133258 NA NA NA NA NA NA 0.674490759476595 -1.17148395066988 1.02948589604322 0.603491732163269 -0.0354995136566629 0.638991245819932 NA 0.922987355073235 NA NA NA -0.745489786789921 1.04786957275828 0.867202405041337 -0.0120444778477963 -0.216800601260334 -0.843113449345744 3.09573963964899 -1.33168688409482 4.35824798431031 NA NA NA NA NA NA NA 0 0.384387207013543 0.25 -0.25 -1.35 -0.0182294799858539 -0.777537958841075 -2.52200892673857 NA -3.31380242699371 0 1.19076763710066 1.37396265819306 -0.358062995771526 1.47388721515256 0 1.31525698097936 NA 1.01173613921489 -0.472143531633616 -2.05719681640362 -0.674490759476595 NA -1.21408336705787 -0.741939835424255 0.236071765816808 0.303520841764468 0.236071765816808 -1.2478079050317 -0.741939835424255 -0.978011601241063 -0.539592607581276 -1.38270605692702 -1.71995143666532 -0.573317145555106 1.01173613921489 0 -0.607041683528936 1.55132874679617 1.41643059490085 -1.95602320248213 0.741939835424255 -0.775664373398084 NA -1.14663429111021 -0.843113449345744 NA 1.11290975313638 2.22581950627276 0.674490759476595 1.71995143666532 -0.472143531633616 -1.55132874679617 -2.59678942398489 NA -0.303520841764468 NA 0.268914616523348 -0.00440843633644834 -1.82068420695316 -0.233647125831762 1.00953192104667 -1.86476857031765 0.392350833943902 -0.789110104224252 0.735808101247195 0.654051645553062 -0.490538734164797 -0.654051645553062 1.24652722637447 0.375665739455319 -0.463712397140159 0.29508970727101 -0.829061558523315 0.0702594541121453 0.716646431943882 -1.81269391609335 0.210778362336436 -0.632335087009308 0.674490759476595 -0.412188797457919 0 0.630018841269347 0.511427059383352 -0.718962677683843 -0.0667078773108721 -0.853032431102753 8.96675950833591 -0.55546297839249 NA NA NA NA NA -1.19909468351395 NA 0.314762354422411 NA NA NA NA NA NA -0.0843893145120882 4.1551393203251 -0.505868069607447 -0.843113449345744
RV0612 0.674490759476595 -0.44966050631773 -0.404694455685957 0.224830253158865 NA -0.404694455685957 -1.57381177211206 -0.044966050631773 0.224830253158865 -0.809388911371914 0.359728405054184 -0.674490759476595 1.48387967084851 -0.314762354422411 0.89932101263546 0.0899321012635461 NA 1.17043984732703 -0.138865744598123 -1.130763920299 0.694328722990613 -0.0991898175700875 0.0198379635140175 1.72590282571952 NA NA NA NA 0.15457079904672 -0.800957776878457 -0.548023742074734 -1.3068258464859 1.33492962813076 0.491816178785017 -0.182674580691578 0.238882143981294 -0.941476685102747 -0.0140518908224291 -1.27872206484104 -1.17361392148928 0.1 -0.228136580411201 -0.15870370811214 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 0.553428315467976 1.34898151895319 0.0691785394334969 -1.40086542352831 -0.12106244400862 3.23755564548766 -0.115626987338845 4.60580832899732 NA NA NA NA NA NA NA NA -1.05 NA NA NA -0.695903164539344 -0.554721372279817 -4.85633346823148 -3.06893295561851 -1.58505328477 -0.303520841764468 NA 1.03983992085975 -1.26467017401862 1.8829533702055 -0.809388911371914 2.2393093214623 -1.29502225819506 0.836368541750978 -0.0539592607581276 -2.94077971131795 -1.64575745312289 -0.647511129097532 -0.971266693646297 -1.16012410629974 -1.48387967084851 1.24106299743694 0.269796303790638 -0.755429650613787 -0.836368541750978 -0.91730743288817 -1.40294077971132 -2.02347227842979 -0.971266693646297 -0.188857412653447 1.16012410629974 -0.0269796303790638 -0.647511129097532 1.24106299743694 1.5648185619857 -0.296775934169702 0.674490759476595 -0.809388911371914 NA -1.32200188857413 -0.593551868339404 NA 3.1296371239714 0.863348172130042 1.42992041009038 0.701470389855659 -0.620531498718468 -1.67273708350196 -0.647511129097532 NA 0.161877782274383 NA 0.091456374166318 -0.411553683748431 -3.08665262811323 -0.320097309582113 1.73767110916004 NA 1.14320467707897 -0.583034385310277 1.38448103260985 1.06498540969989 -1.10048492335655 -1.27798249163986 0.179864202527092 0.284784987334562 -0.115453373243741 0.905397505964078 -1.56165878545482 0.0789944132720337 1.61027073208376 -1.71964761199889 0.127606359900977 -0.346360119731225 0.281037816448581 -1.71433068033635 0.44966050631773 NA NA -0.35 0 -1.05991405060608 NA -1.1177275442755 NA NA NA NA NA NA NA NA NA NA NA NA NA -0.0750000000000001 0 1.37596114933225 0 -0.499999999999999
RV2884 0.375 0.075 -0.375 0.025 0.575 -0.825 -0.175 0.025 -0.025 -0.475 0.775 -0.525 NA -0.357083343252315 NA -0.357083343252315 -1.04239481010019 0.524603924037352 -0.0374717088598109 -0.262301962018676 -0.299773670878487 0.112415126579433 1.49886835439243 -0.0749434177196217 NA NA NA -0.65 -0.615839389087326 -0.381233907530249 -0.645165074281961 NA 1.58358700051027 0.439885277919519 0.469210963114153 -0.117302740778538 -0.439885277919519 0.058651370389269 -0.850444870644403 -2.24268177525968 1.05 NA 0.595138905420525 -0.289067468347112 1.15626987338845 1.54169316451793 -0.642372151882472 0.546016329100101 NA 0.546016329100101 -0.0642372151882472 -0.192711645564741 0.385423291129483 NA -0.417541898723607 0.770846582258966 1.2205070885767 1.31686291135907 1.31686291135907 1.50957455692381 0.44966050631773 1.18838848098257 1.25262569617082 0.0963558227823707 NA -1.41321873414144 -0.513897721505977 NA -0.80296518985309 2.56948860752989 1.0920326582002 -0.674490759476595 -0.44966050631773 2.82643746828288 -3.08338632903586 NA -1.50957455692381 -1.38110012654731 -0.835083797447213 -0.417541898723607 0.0963558227823707 0.546016329100101 1.67016759489443 0.353304683535359 0.963558227823708 -0.995676835417831 1.89499784805329 -0.224830253158865 NA -0.770846582258966 -0.0642372151882472 -1.0920326582002 -0.89932101263546 0.321186075941236 -0.481779113911854 -0.321186075941236 -3.69363987332421 -4.27177481001844 0.289067468347112 NA -0.44966050631773 -0.0642372151882472 0.353304683535359 0.0963558227823707 0.674490759476595 0.738727974664842 -0.0321186075941236 0.546016329100101 -1.86287924045917 NA -2.44101417715339 -1.0920326582002 1.17257624339777 1.74329919372412 0.352810551110834 -1.03767809150245 -0.91315672052216 1.79272543966148 -1.28685737005403 1.5797283577215 1.04546067718872 -0.539592607581276 0.404694455685957 -1.41643059490085 -1.18035882908404 -0.674490759476595 0 -0.0293256851946346 -0.595800170870992 NA NA NA -0.505868069607446 -0.385423291129483 -2.075 -5.475 -2.475 -0.475 0.174867974679117 0.674490759476595 -0.674490759476595 0.437169936697793 -0.878406570481147 1.28623819249025 -2.50973305851756 0.533318274934982 -1.25486652925878 -1.28623819249025 -0.784291580786739 -1.78818480419376 0.0313716632314695 -0.0941149896944086 NA 0.439203285240574 0.0941149896944086 -1.28623819249025 -0.752919917555269 -0.815663244018208 -0.376459958777635 -1.09800821310143 -0.627433264629391 -2.00778644681405 0.219601642620287 -0.188229979388817 -0.815663244018208 2.60384804821197 NA -1.88229979388817 NA -0.407831622009104 2.03915811004552 -0.501946611703513 -0.407831622009104 0.909778233712617 2.76070636436932 1.19212320279584 1.16075153956437 1.81955646742523 0.0313716632314695 -1.25486652925878 -1.38035318218466 2.38424640559169 0.501946611703513 -0.941149896944087 0.488702885608791 0.650257558537316 -2.26580428782257 0.125204871519608 0.0525052687017709 -0.852200899697974 NA NA 0.385423291129483 0.819024493650152 -0.240889556955927 -0.915380316432522 0.688542650299024 -0.351297270560727 0.377714825306893 0.836368541750978 -1.07918521516255 0.728450020234723 0.782409280992851 -1.42992041009038 0.296775934169702 -0.944287063267233 0 -0.362226518978172 1.14663429111021 1.17043984732703 3.47164361495306 -0.515787051364455 -0.95222224867284 -0.674490759476595 NA -0.674490759476595 0.44966050631773 1.20590772148846 0.102195569617666 0.470099620241263 -0.204391139235332 NA 2.04876568191016 -0.0927424794280319 NA NA NA NA NA 0.249811392398739 NA 0.860778683522512 -0.168622689869149 -0.843113449345744
RV3062 0.399188408669822 -0.0137651175403387 -0.0137651175403387 0.509309348992531 -0.151416292943725 -0.344127938508467 -2.16112345383317 0.0137651175403387 0.454248878831176 0.0963558227823708 NA NA 0.228845079108131 -0.75880210441117 0.951513749975911 -0.927424794280318 -0.122634683541199 1.02948589604322 -0.106498540969989 -0.674490759476595 1.20698346432654 NA 2.27196887402643 -0.922987355073235 NA NA NA 0.625 0 NA NA NA 0.370969917712127 -0.0337245379738296 1.48387967084851 -0.168622689869149 -1.18035882908404 0.809388911371914 -0.236071765816808 NA 0.425 -0.29095679820559 0 NA 1.524935630121 1.38808243254604 NA 0.547412790299845 1.58358700051027 0.547412790299845 0.136853197574961 0.957972383024729 1.016623753414 NA -0.156403654371384 NA 3.40177948257761 0.469210963114153 2.07234842042084 1.93549522284588 0.0391009135928461 0.488761419910576 NA 0.136853197574961 NA NA -1.38808243254604 NA -1.09482558059969 NA 0.938421926228306 -1.2707796917675 -1.13392649419254 0.0586513703892691 NA NA -1.79864202527092 -1.64223837089954 -0.410559592724884 -0.293256851946346 NA 1.09482558059969 2.52200892673857 1.7790915684745 1.23167877817465 -0.0782018271856922 3.36267856898476 -0.136853197574961 2.15055024760654 -0.0195504567964231 -1.07527512380327 -1.46628425973173 NA 0.997073296617575 -0.117302740778538 -0.645165074281961 NA NA 0.19550456796423 NA 1.48583471652815 -0.547412790299845 1.13392649419254 NA 2.22875207479223 1.66178882769596 1.75954111167807 1.60313745730669 NA NA -1.66178882769596 -0.625614617485538 0.281037816448581 1.09604748414947 0.393452943028014 NA NA 0.730698322766312 NA 3.11951976257925 0.1 0 0.25 -0.55 -1 -0.35 0.65 -0.697749061527512 0 NA NA NA -0.331529356352903 0.474896555141684 -2.12464589235127 -1.55132874679617 -3.10265749359234 -0.168622689869149 NA NA NA NA -0.5745662025171 1.34898151895319 NA 0.374717088598108 -0.599547341756974 -3.39743493662285 -1.84860430375067 -1.34898151895319 -0.599547341756974 -0.524603924037352 NA 1.02422670883483 0.474641645557604 -0.374717088598108 -0.599547341756974 -1.12415126579433 -1.77366088603105 -1.87358544299054 -1.22407582275382 -0.774415316436091 0 0.0999245569594956 -0.0249811392398739 NA NA -0.0249811392398739 -0.0499622784797478 -0.224830253158865 0.5745662025171 0.0499622784797478 -0.149886835439243 1.42392493667281 3.72218974674121 2.49811392398739 2.99773670878487 2.57305734170701 -1.09917012655445 -2.47313278474752 -1.39894379743294 NA 0.549585063277226 NA 0.866371751396661 0.773338543192993 -2.42467798880811 NA 0.587272126785656 0.436093163454695 1.12221307395675 -0.936146657549412 1.39894379743294 0.549585063277226 0.299773670878487 -0.599547341756973 0.89932101263546 -0.069178539433497 -0.659502075932671 1.43891362021674 -1.34898151895319 0.239818936702789 1.0492078480747 -1.70870992400737 0.119909468351395 -0.779411544284066 NA NA 0.05 NA 2.51488697461988 NA -0.279431886068875 -0.904104635043096 NA -0.674490759476595 0.674490759476595 -0.0843113449345744 0 0.168622689869149 0.843113449345744 -1.1258417188256 2.37339605590261 1.26783977345225 -0.010142718187618 NA NA NA NA 0.611257250775664 0 4.825 -0.224830253158865 -0.674490759476595
RV3098C NA NA NA NA NA NA NA NA NA NA NA NA NA 0.224830253158865 0.140518908224291 NA NA 0.565113879561472 -0.346360119731225 -0.565113879561472 0.164065319872685 0.309901159759517 2.02347227842979 1.22137515905221 NA NA NA -0.5 -1.34898151895319 -1.7236986075513 -1.31150981009338 -0.861849303775649 1.87358544299054 0.711962468336406 0.224830253158865 0.562075632897163 0.224830253158865 -0.112415126579433 -1.76117031641111 NA NA NA NA 0.785063015128496 0.475460699303174 -0.298545090260132 -1.42638209790952 -0.232201736868992 1.7802133159956 -0.232201736868992 1.49272545130066 0.298545090260132 -0.431231797042413 -4.47817635390198 NA -0.254316187999372 0.165858383477851 0.762948563998116 0.475460699303174 1.20523758660572 0.165858383477851 0.210087285738612 NA 0.121629481217091 -3.17342373720955 NA -0.409117345912033 NA -1.84655666938674 0.652376308346215 0.696605210606975 -0.939864173041157 -1.0062075264323 3.59359830868678 NA -4.85412202311845 -1.60329770695256 -1.13889423321458 0.298545090260132 -0.519689601563934 0.210087285738612 0.364888443651273 NA 1.0062075264323 0.939864173041157 -0.939864173041157 0.652376308346215 -0.320659541390512 NA -0.210087285738612 -0.740834112867736 -0.497575150433554 -0.0552861278259504 1.29369539112724 -0.453346248172793 -0.364888443651273 -5.38486885024757 NA 0.497575150433554 -4.5666341584235 0.917749721910777 -0.740834112867736 0.762948563998116 NA 0.630261857215835 1.4484965490399 0.718719661737355 0.608147406085454 -2.31096014312473 -2.70902026347157 -1.18312313547534 -1.24946648886648 2.08342701260548 2.84784987334562 0.539592607581276 NA NA 0.917749721910777 NA 3.43879715077412 0.415071236600982 -0.674490759476595 0 -1.478691280391 -0.907968330064647 -0.622606854901472 0.804200520914402 NA NA NA NA NA -1.49412510010638 -0.599999999999999 -1.36584378794011 -0.826251180358829 -0.489005800620532 0.387832186699042 NA NA NA NA NA 1.1314038546059 NA 0.500428627998764 -0.522186394433493 -1.63183248260467 -1.37073928538792 -0.913826190258613 -0.217577664347289 -1.52304365043102 NA 0 0.435155328694578 -0.19581989791256 -0.0870310657389155 -0.348124262955662 -0.304608730086204 -1.41425481825738 -1.04437278886699 NA 0.0870310657389155 -0.348124262955662 -0.500428627998764 0.739764058780782 NA NA 0.696248525911324 0.174062131477831 0.848552890954426 -0.326366496520933 -0.304608730086204 -0.413397562259849 2.1105033441687 2.34983877495072 2.95905623512313 0.892068423823884 -1.283708219649 -3.30718049807879 -0.326366496520933 2.19753440990762 0.261093197216747 NA NA NA NA NA NA NA NA NA 0.137396265819306 0.16237740505918 -1.06169841769464 -1.01173613921489 0.0198379635140175 0.614976868934543 -0.896579180279864 1.4065599984207 -1.32430502775283 0.699167250676959 0.551108303474779 -2.11395274616445 0.649814268276232 -0.320794385604722 0.674490759476595 0 0.0481779113911854 1.94276398242404 1.61993079840105 0.00576487828612475 -0.00576487828612475 -1.68622689869149 5.84558658213049 0.112415126579433 1.44266079110272 0.786905886056028 NA NA 1.08667955693451 0.0722668670867781 2.09573914551656 1.39715943034438 -0.662446281628799 NA NA NA NA 0.659161424033945 NA 2.26271043156753 NA -0.944287063267233
[+] Show/hide bicluster #241 motif PSSM #1. bicluster 241 motif PSSM #1 Mycobacterium tuberculosis H37Rv 6x4
POSITION A C G T
1 1 0 0 0
2 0 1 0 0
3 0 0 0 1
4 1 0 0 0
5 1 0 0 0
6 0 0 0 1 [+] Show/hide bicluster #241 motif PSSM #2. bicluster 241 motif PSSM #2 Mycobacterium tuberculosis H37Rv 10x4
POSITION A C G T
1 0 0 0 1
2 0 0.6 0.2 0.2
3 0 0.8 0 0.2
4 1 0 0 0
5 0 1 0 0
6 0 0 1 0
7 0.6 0 0.4 0
8 0 1 0 0
9 0.6 0 0.4 0
10 0 0.2 0 0.8 |