Bicluster 244 (zzz

GENES 2867:::H37Ra..7H9.shake.replicate.1 2867:::H37Ra..Sauton.s.media.replicate.1 2867:::H37Ra..Sauton.s.media.replicate.4 2867:::H37Rv..Dubos.media.replicate.2 2867:::H37Rv..Sauton.s.media.replicate.2 2867:::H37Rv..Sauton.s.media.replicate.3 2867:::H37Rv..Youman.media.replicate.1 2867:::H37Rv..Youman.media.replicate.2 2867:::H37Rv..Youman.media.replicate.3 2885:::Strain.1843...replicate.3 2885:::Strain.3160...replicate.3 2885:::Strain.M3061a..replicate.2 2885:::Strain.M3061a..replicate.4 4060:::H37Rv.0.05..SDS.exposure.for.1h.rep.3 4060:::H37Rv.wild.type.Vs.H37Rv.sigE.null.mutant.rep.1 4062:::CDC1551.Ctrl.vs.0.05.mM.DETA.NO.40.min.rep.5 4062:::H37Rv.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.1 4062:::H37Rv.ctrl.vs.Rv3132.34.KO..complemented...0.05.mM.DETA.NO.40min.rep.2 4062:::MTB.strain.1254.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.1 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.5min.rep.3 4062:::MTB.strain.1254.Ctrl.vs.high.aeration...0.001.mM.DETA.NO.rep.1 4062:::MTB.strain.1254.Ctrl.vs.high.aeration...0.001.mM.DETA.NO.rep.3 4062:::MTB.strain.1254.Ctrl.vs.high.aeration...0.005.mM.DETA.NO.rep.2 4062:::MTB.strain.1254.Ctrl.vs.high.aeration...0.005.mM.DETA.NO.rep.3 4062:::MTB.strain.1254.Ctrl.vs.high.aeration.rep2 4062:::MTB.strain.1254.Ctrl.vs.high.aeration.rep3 4062:::MTB.strain.1254.Ctrl.vs.low.aeration...0.001.mM.DETA.NO.rep.3 4062:::MTB.strain.1254.Ctrl.vs.low.aeration..0.2..oxygen..2hr.rep.1 4062:::MTB.strain.1254.Ctrl.vs.low.aeration..0.2..oxygen..2hr.rep.2 4062:::MTB1254.Day.0.rep.2 4062:::MTB1254.Day.0.vs.low.Oxygen.Day.4.rep.5 4068:::H37Rv.SDS.treated.vs..H37Rv.delta.mprAB.mutant.SDS.treated.rep.5 4068:::H37Rv.vs..H37Rv.delta.mprAB.mutant.rep.2 4084:::High.iron.wt.vs.high.iron.ideR.Complement.2a 4084:::High.iron.wt.vs.high.iron.ideR.Complement.3b 4089:::H37Rv.wild.type.vs..H37Rv.whiB7.null.rep.4 4089:::H37Rv.wild.type.vs..H37Rv.whiB7.null.with.whiB7.over.expression.rep.1 4089:::MTB1254.control.vs..1.0.ug.ml.Erythromycin.for.2.hr..ref..rep.4 4089:::MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.15.min.rep.1 4089:::MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.15.min.rep.2 4089:::MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.15.min.rep.3 4089:::MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.2.hr..ref..rep.2 4089:::MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.24.hr..ref..rep.1 4089:::MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.24.hr..ref..rep.2 4089:::MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.24.hr..ref..rep.3 4089:::MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.24.hr..ref..rep.4 4089:::MTB1254.ethanol.vs..1.0.ug.ml.Erythromycin.for.30.min.rep.3 4089:::MTB1254.ethanol.vs..100.ug.ml.Erythromycin.for.30.min.rep.3 4089:::MTB1254.ethanol.vs..100.ug.ml.Erythromycin.for.30.min.rep.4 4089:::MTB1254.ethanol.vs..25.ug.ml.Erythromycin.for.30.min.rep.2 4089:::MTB1254.ethanol.vs..25.ug.ml.Erythromycin.for.30.min.rep.3 4089:::MTB1254.ethanol.vs..25.ug.ml.Erythromycin.for.30.min.rep.4 4089:::MTB1254.vs..MTB1254.rep2 4089:::MTB1254.vs..MTB1254.rep3 4099:::H37Rv.hypoxia.2hr.rep.1 4101:::H37Rv.Day.0.rep.2 4101:::H37Rv.Day.0.rep.3 4101:::H37Rv.Day.0.vs.low.Oxygen.Day.4.rep.1 4101:::H37Rv.Day6.1 4101:::H37Rv.Day8.1 4101:::H37Rv.Day8.2 4101:::NRP.Day12..2 4101:::NRP.Day14..1 4101:::NRP.Day14..3 4101:::NRP.Day14..4 4101:::NRP.Day14..5 4101:::NRP.Day20..2 4101:::NRP.Day6..1 4107:::H2O2.4mM.vs.ctrl.12h.1 4107:::H2O2.4mM.vs.ctrl.8h.1 4107:::Mtm.0.2ug.mL.vs.ctrl.12h.1 4107:::Mtm.0.2ug.mL.vs.ctrl.8h.1 4107:::pH4.8vspH6.8..11h. 4107:::pH4.8vspH6.8..2h.B 4107:::pH4.8vspH6.8..4h.A 4107:::pH4.8vspH6.8..5h. 4107:::pH5.2vspH6.8..2h. 4107:::pH5.2vspH6.8..5.5h. 4107:::pH5.6vspH6.8..11h. 4107:::pH5.6vspH6.8..2h. 4107:::pH5.6vspH6.8..4h. 4107:::pH5.6vspH6.8..5h. 4107:::pH5.6vspH6.8..7h. 4107:::UV.20J.vs.ctrl.8h.1 4107:::UV.40J.vs.8h.2 4107:::UV.40J.vs.ctrl.8h.1 4107:::X.109..10ug.mL..DMSO..12h..replicate.2..GEO.acc..GSM28054. 4107:::X0.05mM.Palmitate.10mM.Gluc..2 4107:::X0.12mg.mL.BZAvspH5.6..7h. 4107:::X0.12mg.mL.NamvspH5.6..4h. 4107:::X0.12mg.mL.NamvspH5.6..5.5h. 4107:::X0.12mg.mL.NamvspH5.6..7h. 4107:::X0.12mg.mL.PZAvspH5.6..4h. 4107:::X0.15mg.mL.TricvsEtOH..6h 4107:::X0.15mg.mL.TricvsEtOH..6hA 4107:::X0.1mM.GSNO.DMSO..3.5h 4107:::X0.1mM.GSNOvsDMSO..4h 4107:::X0.1ug.mL.Mtmvsctrl..0.33h. 4107:::X0.1ug.mL.Mtmvsctrl..1.5h. 4107:::X0.2ug.mL..111891.DMSO..5.5h..1 4107:::X0.2ug.mL..111891.DMSO..5.5h..3 4107:::X0.2ug.mL.Mtmvsctrl..0.33h. 4107:::X0.2ug.mL.Mtmvsctrl..1.5h. 4107:::X1.2mg.mL.NamvspH5.6..5h. 4107:::X1.2mg.mL.PZA.pH5.6..5h. 4107:::X100ug.mL.Cephalexin.Ctrl..6h 4107:::X10mM.Succinate.10mM.Gluc..1 4107:::X10ug.mL.ChlorprovsEtOH 4107:::X10ug.mL.ChlorprovsEtOH..6h 4107:::X10ug.mL.EconazolevsEtOH..6h 4107:::X10ug.mL.TetvsEtOH..6h 4107:::X10ug.mL.TetvsEtOH..6hA 4107:::X1mM.DNP.DMSO..6h..1 4107:::X1mM.DTNBvsDMSO..6h 4107:::X1ug.mL..59vsDMSO..6h 4107:::X20mJ.UVvsctrl..6h. 4107:::X20ug.mL.methoxatinvsDMSO..6h 4107:::X20ug.mL.Procept.6776vsDMSO..6h 4107:::X20uM.DCCD.DMSO..6h..1 4107:::X20uM.DCCD.DMSO..6h..2 4107:::X24ug.mL.cltrmazole.DMS..6h..1 4107:::X24ug.mL.cltrmazole.DMS..6h..3 4107:::X24ug.mL.Econazole.DMSO..6h..1 4107:::X24ug.mL.Econazole.DMSO..6h..2 4107:::X2mM.DTNBvsDMSO 4107:::X2mM.ZnSO4.DMSO..6h 4107:::X2mMb.mercaptoethanolvsDMSO.6h 4107:::X30ug.mLProcept6776vsDMSO.6h 4107:::X30ug.mLProcept6776vsDMSO.6hA 4107:::X40mJ.UV.ctrl..6h. 4107:::X4mM.H2O2vsctrl..1h. 4107:::X50ug.mL.PA.1vsDMSO..6h 4107:::X50ug.mL.Triclosan.DMSO..6h 4107:::X50ug.mL.Triclosan.EtOH 4107:::X50ug.mL.VerapamilvsDMSO..6h 4107:::X5ug.mL.CFZ.0.1mM.GSNO.DMSO..1 4107:::X5ug.mL.CFZ.0.1mM.GSNO.DMSO..2 4107:::X5ug.mLCFZ.0.1mMGSNOvsDMSO.A 4107:::X7d.Dubos.NRP.1vsDubos.log.phase 4107:::X7d.Dubos.NRP.1vsDubos.log.phase.A 4363:::H37Rv.hypoxia.1.day.rep.9 4363:::H37Rv.hypoxia.12hr.rep.1 4363:::H37Rv.hypoxia.12hr.rep.2 4363:::H37Rv.hypoxia.4.day.rep.7 4363:::H37Rv.hypoxia.4hr.rep.1 4363:::H37Rv.hypoxia.4hr.rep.2 4363:::H37Rv.hypoxia.4hr.rep.5 4363:::H37Rv.hypoxia.7.day.rep.1 4363:::H37Rv.hypoxia.8hr.rep.1 4363:::H37Rv.hypoxia.8hr.rep.2 4364:::H37dosR.mutant.hypoxia.1.day.rep.1 4364:::H37dosR.mutant.hypoxia.1.day.rep.4 4364:::H37dosR.mutant.hypoxia.12hr.rep.4 4364:::H37dosR.mutant.hypoxia.4hr.rep.5 4365:::H37Rv.diamide.1h.rep.3 4365:::H37Rv.diamide.1h.rep.4 4365:::H37Rv.diamide.1h.rep.5 4365:::H37Rv.sigma.H.null.mutant.diamide.1h.rep.2 4365:::H37Rv.sigma.H.null.mutant.diamide.1h.rep.3 4396:::Strain.27.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.1 4396:::Strain.27.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.1 4489:::MTB1254.WT.vs.Rv3662c.3665c.KO.in.7H9OADC.Exp2..OD1.5.3 4575:::Extracted.Lung.Surfactant.30min.rep.2 4575:::Whole.Lung.Surfactant.30min.rep.2 4583:::X40ug.ml.Ethionamide.vs.Ethanol.6hrs.rep.1 4583:::X40ug.ml.Ethionamide.vs.Ethanol.6hrs.rep.2 4599:::H37Rv.grown.in.7H9.vs.H37Rv.24hrs.after.infection.in.macrophages.rep.1 4599:::H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.4 4599:::SigE.mutant.grown.in.7H9.vs.24hrs.after.infection.in.macrophages..DS..rep.1 4615:::AA_30uM_10.min_04 4615:::AA_30uM_30min_05 4615:::AA_30uM_4h_02 4615:::AA_30uM_4h_03 4615:::AA_30uM_4h_07 4615:::AA_60uM_24h_02 4615:::aceatate.induction.3 4615:::Acetate.3mM.2h.04 4615:::Acetate.3mM.2h.05 4615:::CK_LA_2h 4615:::CK_OA_NA_2h.02 4615:::CK.for.AA.Na.4h.2 4615:::ETYA_30uM_10min.01 4615:::L2A_30uM_30min_07 4615:::LAA_50uM_10min_01 4615:::LAA_50uM_30min_01 4615:::MAPP_5uM_30m_01 4615:::MTB1254_FA5_10min_01 4615:::MTB1254_FA5_10min_02 4615:::MTB1254_FA5_10min_04 4615:::OA_50uM_2h_04 4615:::OA_50uM_4h_07 4615:::PA_300uM_2h_T0_01 4615:::PA_50uM_10.min_02 4615:::PA_50uM_10min_04 4615:::PA_50uM_10min_05 4615:::PA_50uM_10min_T0_01 4615:::PA_50uM_2h_01 4615:::PA_50uM.AA_30uM_30min_04 4615:::PA_50uM.OA_30uM_30min_03 4615:::Rv.MT71_100503_01 4615:::Rv.MT71_100603_01 4615:::Rv.MT96_100603_01 4615:::Rv.p0485.2._300uM.PA_4h 4615:::TBE055 4615:::X2.2..Dipyridyl_0.2mM.Dpd.AA_50uM_01 4615:::X2.2..Dipyridyl_1mM.Dpd.AA_50uM_01 4630:::H37Rv.wild.type.Cy3.vs.Rv0485.Tn.mutant.Cy5.rep.2 4630:::H37Rv.wild.type.Cy5.vs.Rv0485.Tn.mutant.Cy3..DS..rep.2 4696:::H37Rv.wt.vs.dosS.dosT.null.dosT.complemented.rapid.anaerobic.dormancy.day.6.rep.1 4696:::H37Rv.wt.vs.dosT.null.nitric.oxide.treatment.1hr.rep.1 4699:::CDC1551.Ctrl.vs.clinical.isolate.10517.01_Afri2.rep.2 4699:::CDC1551.Ctrl.vs.clinical.isolate.1500.03_Beijing.rep.2 4699:::CDC1551.Ctrl.vs.clinical.isolate.1797.03_EAI.rep.2 4699:::CDC1551.Ctrl.vs.clinical.isolate.2199.99_Uganda.rep.2 4699:::CDC1551.Ctrl.vs.clinical.isolate.2336.02_Haarlem.rep.3 4699:::CDC1551.Ctrl.vs.clinical.isolate.4130.02_Haarlem.rep.1 4699:::CDC1551.Ctrl.vs.clinical.isolate.4130.02_Haarlem.rep.2 4699:::CDC1551.Ctrl.vs.clinical.isolate.4130.02_Haarlem.rep.3 4699:::CDC1551.Ctrl.vs.clinical.isolate.4850.03_EAI.rep.2 4699:::CDC1551.Ctrl.vs.clinical.isolate.947.01_EAI.rep.2 4703:::Clinical.isolate.12954.03_Beijing.extra.vs.intracellular.in.resting.macrophages.rep.2 4703:::Clinical.isolate.2333.99_Uganda.extra.vs.intracellular.in.resting.macrophages.rep.2 4703:::Clinical.isolate.4130.02_Haarlem.extra.vs.intracellular.in.resting.macrophages.rep.2 4703:::Clinical.isolate.947.01_EAI.extra.vs.intracellular.in.resting.macrophages.rep.2 4704:::Clinical.isolate.2333.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.2 4704:::Clinical.isolate.4850.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.2 4704:::Clinical.isolate.947.01_EAI.extra.vs.intracellular.in.activated.macrophages.rep.1 4704:::H37Rv.extra.vs.intracellular.in.activated.macrophages.rep.1 4735:::BCG.wild.type.vs.BCG.with.pMFdosR.at.OD.0.2.rep.5 4799:::H37Rv.ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.3 4802:::H37Rv.ctrl.vs.relE1.overexpression.72.hr.rep.4 4802:::H37Rv.ctrl.vs.relE2.overexpression.6.hr.rep.1 4802:::H37Rv.ctrl.vs.relE2.overexpression.72.hr.rep.2 4802:::H37Rv.ctrl.vs.relE3.overexpression.6.hr.rep.3 4802:::H37Rv.ctrl.vs.relE3.overexpression.6.hr.rep.4 4802:::H37Rv.ctrl.vs.relE3.overexpression.72.hr.rep.4 4815:::H37Rv.reaeration.for.12hrs.rep.2 4815:::H37Rv.reaeration.for.12hrs.rep.6 4815:::H37Rv.reaeration.for.1hrs.rep.5 4815:::H37Rv.reaeration.for.4hrs.rep.8 4815:::H37Rv.reaeration.for.6hrs.rep.4 Milano_Tuberculosis2009:::H37Rv.wild.type.vs.H37Rv.Bif1.mutant.rep.3 Provvedi_Microbiology2009:::H37Rv.Control.vs.subinhibitory.conc..5.ug.ml..vancomycin.DS.rep.1 Raghavan_Nature2008:::WT.rep2 RV1182 -0.229326858222042 NA -0.627276406313234 1.02522595440442 0.627276406313233 0.580062053149872 0.924052340482935 0.768919465803319 0.789154188587617 0.160593037970618 1.72798108856385 0.0706609367070719 -0.815812632890739 NA NA -0.760963933768466 0.415071236600982 0.882026377777086 -0.691785394334969 1.0722673612192 0.760963933768466 0.985794186927331 1.17603517036945 0.864731742918712 1.97158837385466 2.05806154814653 0.89932101263546 1.33168688409482 1.7467581206958 0.778258568626841 0.0518839045751227 0.984017340880238 0.669870959754153 -0.579825389725494 -0.674490759476595 1.00085725599753 2.24104994277707 -2.56741643929801 0.718006292346053 1.41425481825738 1.93644121269087 1.15316162104063 -3.74233582677337 -3.37245379738298 -3.41596933025243 -3.17663389947042 -0.609217460172409 -1.37073928538792 -1.24019268677955 0.0652732993041866 -0.892068423823884 -0.478670861564035 0.979099489562799 2.1105033441687 -1.20143666531768 0.57072295032635 0.683138076905782 0.579370267755537 0.925262964923021 0.994441504356518 0.83878979063115 -1.59110640697043 -1.69487421612068 0.12106244400862 -1.46139664553262 0.147004396296181 -2.47313278474752 -0.18159366601293 -0.466111500451306 -0.751262065433281 -0.312568888537934 -0.553850135830375 1.65058307806874 1.59574643095682 1.72735438402543 1.66155040749112 2.02347227842979 1.48607313673299 2.45119812590275 1.55187711326729 1.61768108980159 2.00153761958502 1.4093018307763 -1.01447797157049 -1.02544530099287 -0.904804677346652 NA 1.15705325406148 -0.926739336191419 -1.46413847788822 -0.948673995036187 -1.15705325406148 -0.95964132445857 -2.63764272608327 -2.0783089255417 0.619654112364677 0.433209512184155 0.499013488718457 0.542882806407991 0.488046159296073 0.553850135830375 0.641588771209444 0.707392747743746 -0.433209512184155 -0.685458088898979 0.378372865072236 0.104189629512645 1.11318393637194 1.01447797157049 0.575784794675142 NA -3.97565691561408 -0.828033371389966 0.0493529824007265 -0.2686995708484 -0.674490759476595 0.356438206227469 0.169993606046947 -0.575784794675142 -0.356438206227469 0.2686995708484 0.553850135830375 0.520948147563224 0.586752124097526 0.707392747743746 1.09124927752717 0.849968030234734 -1.78219103113735 -1.83702767824926 -1.36543251308677 -2.10024358438647 0.444176841606538 -2.18798221976554 -1.06931461868241 0.696425418321363 0.696425418321363 0.83900070081235 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