|
[+] Show/hide bicluster #249 rows and columns.
bicluster 249
Mycobacterium tuberculosis H37Rv
7x242
[+] Show/hide bicluster #249 rows (genes).
bicluster 249 genes
Mycobacterium tuberculosis H37Rv
7
[+] Show/hide bicluster #249 rows (short gene names).
bicluster 249 short names
Mycobacterium tuberculosis H37Rv
7
short_name
[+] Show/hide bicluster #249 rows (long gene names).
bicluster 249 long names
Mycobacterium tuberculosis H37Rv
7
long_name
[+] Show/hide bicluster #249 rows (NCBI RefSeq gene IDs).
bicluster 249 NCBI RefSeq IDs
Mycobacterium tuberculosis H37Rv
14
[+] Show/hide bicluster #249 gene upstream sequences.
bicluster 249 upstream sequences
Mycobacterium tuberculosis H37Rv
7
upstream
[+] Show/hide bicluster #249 columns (arrays; conditions).
bicluster 249 arrays
Mycobacterium tuberculosis H37Rv
242
[+] Show/hide bicluster #249 ratios.
bicluster 249 ratios
Mycobacterium tuberculosis H37Rv
7x242
GENES 2867:::H37Ra..7H9.shake.replicate.2 2867:::H37Ra..7H9.shake.replicate.4 2867:::H37Ra..Youman.media.replicate.3 2867:::H37Rv..7H9.shake.replicate.1 2867:::H37Rv..7H9.shake.replicate.2 2867:::H37Rv..7H9.shake.replicate.4 2885:::H37Rv..7H9.roll.replicate.4 2885:::Strain.1254...replicate.3 2885:::Strain.3160...replicate.3 2885:::Strain.3160..replicate.4 2885:::Strain.9802826..replicate.3 2885:::Strain.H37Ra..replicate.4 4055:::H37Rv.Vs.M.bovis.rep3 4060:::H37Rv.sigE.null.0.05..SDS.exposure.for.1h.rep.2 4062:::MTB.strain.1254.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.3 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.20min.rep.2 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.KCN.1hr.rep.3 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.KCN.20min...0.05.mM.DETA.NO.40min.rep.2 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.KCN.20min...0.05.mM.DETA.NO.40min.rep.3 4062:::MTB.strain.1254.Ctrl.vs.1.0.mM.DETA.NO.40min.rep.1 4062:::MTB.strain.1254.Ctrl.vs.high.aeration...0.005.mM.DETA.NO.rep.2 4062:::MTB.strain.1254.Ctrl.vs.low.aeration...0.005.mM.DETA.NO.rep.1 4062:::MTB.strain.1254.Ctrl.vs.low.aeration...0.05.mM.DETA.NO.rep.1 4062:::MTB.strain.1254.Ctrl.vs.low.aeration...0.05.mM.DETA.NO.rep.3 4062:::MTB1254.Day.0.rep.3 4068:::H37Rv.vs..H37Rv.SDS.treated.rep.1 4082:::H37Rv.wild.type.Vs.Rv3676.null.6 4082:::Rv3676.null.Vs.H37Rv.wild.type.6 4089:::H37Rv.wild.type.vs..H37Rv.whiB7.null.rep.2 4089:::MTB1254.ethanol.vs..0.5.ug.ml.Erythromycin.for.15.min.rep.1 4089:::MTB1254.ethanol.vs..0.5.ug.ml.Tetracyclin.for.15.min.rep.2 4089:::MTB1254.ethanol.vs..100.ug.ml.Erythromycin.for.30.min.rep.2 4089:::MTB1254.ethanol.vs..25.ug.ml.Erythromycin.for.30.min.rep.4 4089:::MTB1254.ethanol.vs..5.0.ug.ml.Erythromycin.for.15.min.rep.1 4089:::MTB1254.ethanol.vs..5.0.ug.ml.Erythromycin.for.15.min.rep.3 4099:::H37.Rv3133c.DosR.mutant.2hr.rep.2 4100:::H37Rv.0.2..Oxygen..2h..3 4101:::H37Rv.Day.0.vs.low.Oxygen.Day.4.rep.6 4101:::H37Rv.Day14.2 4101:::NRP.Day12..2 4101:::NRP.Day12..3 4101:::NRP.Day14..1 4101:::NRP.Day8..1 4107:::DIPED..100ug.mL..DMSO..12h..2 4107:::DIPED.50ug.mL.vs.DMSO.12h.1 4107:::EMB.10ug.mL.vs.DMSO.12h.2 4107:::Mtm.0.2ug.mL.vs.ctrl.8h.2 4107:::pH4.8vspH6.8..2h. 4107:::pH4.8vspH6.8..4h.B 4107:::pH4.8vspH6.8..7h. 4107:::pH5.2vspH6.8..5.5h. 4107:::pH5.6vspH6.8..11h. 4107:::pH5.6vspH6.8..2h. 4107:::pH5.6vspH6.8..7h. 4107:::WT.t.0h.WT.t.6h..1 4107:::X.109..10ug.mL..vs.DMSO..12h..replicate.1..GEO.acc..GSM28053. 4107:::X.109..1ug.mL..vs.DMSO..12h..replicate.2..GEO.acc.GSM28052. 4107:::X.241..10ug.mL..DMSO..12h..1 4107:::X.241..1ug.mL..DMSO..12h..1 4107:::X0.12mg.mL.BZAvspH5.6..11h. 4107:::X0.12mg.mL.Nam.pH5.6..2h..2 4107:::X0.12mg.mL.PZA.pH5.6..2.5h. 4107:::X0.12mg.mL.PZA.pH5.6..4h..1 4107:::X0.12mg.mL.PZA.pH5.6..5h. 4107:::X0.12mg.mL.PZAvspH5.6..5.5h. 4107:::X0.1mM.GSNOvsDMSO..6h 4107:::X0.2ug.mL.Mtmvsctrl..1.5h. 4107:::X0.5ug.mL..111891vsDMSO.6hA 4107:::X0.5ug.mL..124196vsDMSO..6hA 4107:::X0.5ug.mL.CeruleninvsDMSO..6hC 4107:::X1.2mg.mL.PZAvspH5.6..10.5h. 4107:::X1.2mg.mL.PZAvspH5.6..7h. 4107:::X10mM.succinatevs10mM.glucose 4107:::X10ug.mL..109vsDMSO..6hA 4107:::X10ug.mL..241vsDMSO..6h 4107:::X10ug.mL..59vsDMSO..6h 4107:::X10ug.mL.PA.21vsDMSO..6h 4107:::X1ug.mL..111891vsDMSO..6h 4107:::X20ug.mL.Prcp.6778.DMSO..6h..2 4107:::X24ug.mL.cltrmazole.DMS..6h..1 4107:::X24ug.mL.Econazole.DMSO..6h..1 4107:::X25ug.mL.AntimycinvsDMSO..6h 4107:::X2mMb.mercaptoethanolvsDMSO.6h 4107:::X2ug.mL..111895vsDMSO..6hB 4107:::X40ug.mL.EtavsEtOH..6h 4107:::X50ug.mL.VerapamilvsDMSO..6h 4107:::X5ug.mL.OfloxvsEtOH..6h 4363:::H37Rv.hypoxia.7.day.rep.3 4363:::H37Rv.hypoxia.8hr.rep.3 4364:::H37dosR.mutant.hypoxia.4.day.rep.1 4365:::H37Rv.diamide.1h.rep.3 4365:::H37Rv.diamide.1h.rep.4 4366:::H37Rv.vs.H37.sigma.H.null.mutant.rep.3 4489:::MTB1254.Opp.KO.complemented.vs.Opp.KO.in.7H9OADC..OD..1.0.1 4489:::MTB1254.WT.vs.Rv3662c.3665c.KO.in.7H9OADC..OD.1.5.3 4489:::MTB1254.WT.vs.Rv3662c.3665c.KO.in.7H9OADC.Exp2..OD.0.3.1 4489:::MTB1254.WT.vs.Rv3662c.3665c.KO.in.7H9OADC.Exp2..OD.0.3.3 4489:::MTB1254.WT.vs.Rv3662c.3665c.KO.in.7H9OADC.Exp2..OD1.2 4489:::MTB1254.WT.vs.Rv3662c.3665c.KO.in.7H9OADC.Exp2..OD1.5.3 4489:::MTB1254.WT.vs.Rv3662c.3665c.KO.in.7H9OADC.Exp2..OD1.5.4 4523:::H37Rv.sigB.null.mutant.control.vs.0.05..SDS.for.60.min.rep.3 4575:::Whole.Lung.Surfactant.2hrs.rep.3 4583:::X0.5ug.mL.Cerulenin.vs.DMSO..6hrs.rep.4 4599:::H37Rv.vs.SigE.mutant.24hrs.after.macrophage.infection..DS..rep.1 4599:::H37Rv.vs.SigE.mutant.24hrs.after.macrophage.infection..DS..rep.2 4599:::H37Rv.wild.type.vs.sigE.mutant.in.7H9.media..DS..rep.3 4615:::AA_10uM_10.min_01 4615:::AA_30uM_10.min_07 4615:::AA_30uM_1h_05 4615:::AA_30uM_1h_06 4615:::AA_30uM_24h_04 4615:::AA_30uM_2h_07 4615:::AA_30uM_2h_08 4615:::AA_30uM_30min_01 4615:::AA_30uM_30min_09 4615:::AA_30uM_4h_08 4615:::AA_60uM_24h_01 4615:::Acetate.3mM.10m.01 4615:::Acetate.3mM.10m.03 4615:::Acetate.3mM.2h.03 4615:::Acetate.3mM.30m.01 4615:::Acetate.3mM.30m.02 4615:::CHP.AA.24h.1 4615:::CK_AA_NA.2h 4615:::CK_OA_NA_2h.02 4615:::CK.AA.Na.2h 4615:::CK.for.OA.4h.1 4615:::CK.MDG.2h.for.PA.NA 4615:::CK.MDG.2h.for.PA.NA.2 4615:::CK.OA_NA_2H 4615:::CK.PA.NA.2h.3..101801 4615:::ETYA_30uM_10min.02 4615:::L2A_30uM_10min_05 4615:::L2A_30uM_1h_04 4615:::L2A_30uM_1h_06 4615:::L2A_30uM_1h_07 4615:::L2A_30uM_2h_04 4615:::L2A_30uM_4h_04 4615:::L2A_30uM_4h_T0_01 4615:::MDGCy3.7H9Cy5.01 4615:::MTB1254_INH_20MIN 4615:::MTB1254_Pellicle_14D_02 4615:::MTB1254.0485.1._OA_10m_03 4615:::MTB1254.0485.1._OA_30m_01 4615:::MTB1254.0485.1._PA_12h_01 4615:::MTB1254.0485.1._PA_4h_01 4615:::MTB1254.0485.1._PA_4h_02 4615:::MTB1254.0485.1._PA_4h_03 4615:::MTB1254.0485.1._PA_4h_04 4615:::MTB1254.0485.14._01 4615:::MTB1254.1683._01 4615:::MTB1254.3524.1._PA_12h_03 4615:::MTB1254.B4.1._OA_30MIN_04 4615:::MTB1254.B4.1.Compl._OA_30MIN_04 4615:::MTB1254.B4.1.Compl._PA_30MIN_01 4615:::MTB1254.B4.1.Compl._PA_4h_06 4615:::MTB1254TA1_OA.30min_02 4615:::MTB1254TA1_OA.30min_03 4615:::MTB6548_PA50_1h_02 4615:::OA_50uM_10min_07 4615:::OA_50uM_1h_06 4615:::OA_50uM_24h_05 4615:::OA_50uM_2h_02 4615:::OA_50uM_2h_04 4615:::OA_50uM_2h_09 4615:::OA_50uM_30min_05 4615:::OA_50uM_30min_06 4615:::OA_50uM_4h_01 4615:::OA_50uM_4h_02 4615:::OA_50uM.0.5.BSA_4h_01 4615:::PA_100uM_2h_03 4615:::PA_100uM_2h_T0_05 4615:::PA_25uM_2h_T0_01 4615:::PA_50uM_10min_T0_01 4615:::PA_50uM_12h_04 4615:::PA_50uM_1h_05 4615:::PA_50uM_24h_02 4615:::PA_50uM_24h_04 4615:::PA_50uM_2h_T0_01 4615:::PA_50uM_2h_T0_02 4615:::PA_50uM_30min_01 4615:::PA_50uM_3d_03 4615:::PA_50uM_3d_04 4615:::PA_50uM_4h_05 4615:::PA_50uM_4h_T0_01 4615:::PA_50uM_8h_04 4615:::PA_50uM.0.5.BSA_1h_01 4615:::PA_50uM.AA_30uM_2h_02 4615:::PA_50uM.AA_30uM_30min_01 4615:::PA_50uM.OA_10uM_2h_02 4615:::PA_50uM.OA_30uM_24h_01 4615:::PA_50uM.OA_30uM_2h_01 4615:::Rv.MT71_100503_02 4615:::Rv.MT71_100703_01 4615:::Rv.MT71_100803_01 4615:::Rv.MT90_100803_01 4615:::Strain95.OA.10M.01 4615:::TBD045 4615:::TBD092 4615:::TBD099 4615:::TBD1114 4615:::TBD1276 4615:::TBD426 4615:::Test.1 4615:::Test.3 4615:::WT_85.1_OA_10min_02 4615:::WT_85.1_PA_10min_02 4615:::X2.BA_500uM_30min_01 4615:::X7h9.control.4h 4637:::H37Rv.control.vs.1mg.ml.cholesterol.for.3.hrs.rep.1 4696:::H37Rv.wt.vs.dosS.dosT.null.anaerobic.Gaspak.4hr.rep.1 4696:::H37Rv.wt.vs.dosS.dosT.null.rapid.anaerobic.dormancy.day.6.rep.2 4696:::H37Rv.wt.vs.dosS.dosT.null.rapid.anaerobic.dormancy.day.6.rep.3 4696:::H37Rv.wt.vs.dosS.null.rapid.anaerobic.dormancy.day.6.rep.3 4696:::H37Rv.wt.vs.dosT.null.anaerobic.Gaspak.4hr.rep.3 4699:::CDC1551.Ctrl.vs.clinical.isolate.10514.01_Afri2.rep.3 4699:::CDC1551.Ctrl.vs.clinical.isolate.2169.99_Uganda.rep.2 4699:::CDC1551.Ctrl.vs.H37Rv.rep.3 4703:::Clinical.isolate.1500.03_Beijing.extra.vs.intracellular.in.resting.macrophages.rep.1 4703:::Clinical.isolate.2336.02_Haarlem.extra.vs.intracellular.in.resting.macrophages.rep.2 4703:::Clinical.isolate.947.01_EAI.extra.vs.intracellular.in.resting.macrophages.rep.2 4704:::Clinical.isolate.2336.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.2 4735:::BCG.wild.type.vs.BCG.with.pMFdosR.at.OD.0.2.rep.4 4735:::BCG.wild.type.vs.BCG.with.pMFdosR.at.OD.0.2.rep.5 4795:::CDC1551.ctrl.vs.40.ug.ml.Thioridazine.1hr.rep.2 4799:::H37Rv.KatG.null..ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.2 4799:::H37Rv.mouse.hallow.fiber..ctrl.vs.25mg.kg.Isoniazid.3rd.dose.6hrs.rep.2 4815:::H37Rv.reaeration.for.12hrs.rep.4 4815:::H37Rv.reaeration.for.1hrs.rep.3 4815:::H37Rv.reaeration.for.24hrs.rep.4 4815:::H37Rv.reaeration.for.24hrs.rep.5 4815:::H37Rv.reaeration.for.4hrs.rep.7 4815:::H37Rv.reaeration.for.6hrs.rep.5 4860:::CDC1551.nadABC.null.nicotinamide.starvation.rep.2 4860:::CDC1551.nadABC.null.nicotinamide.starvation.rep.3 4928:::Mtb.Erdman.strain.20.ppm.CO.rep.2 4928:::Mtb.Erdman.strain.200.ppm.CO.rep.2 Maciag_JBacteriol2007:::H37Rv.wild.type.vs.H37Rv.FurB.null.rep.2 Maciag_JBacteriol2007:::H37Rv.wild.type.vs.H37Rv.FurB.null.rep.4 Maciag_JBacteriol2007:::H37Rv.wild.type.vs.H37Rv.FurB.null.rep.5 Provvedi_Microbiology2009:::H37Rv.Control.vs.400.ug.ml.vancomycin.for.4.hrs.DS.rep.2 Provvedi_Microbiology2009:::H37Rv.Control.vs.subinhibitory.conc..5.ug.ml..vancomycin.DS.rep.2
RV0063 0.119027781084105 0.23805556216821 0.31740741622428 -1.22995373786909 -1.30930559192516 -0.87287039461677 -0.0578134936694225 0.55886377213775 -1.05991405060608 -0.443236784798906 -0.0192711645564742 -0.597406101250698 0.510779410089072 0.1 0.674490759476595 -1.24106299743694 1.05220558478349 0.35073519492783 0.755429650613787 -0.188857412653447 0.539592607581276 0.242816673411574 0.485633346823149 -0.107918521516255 0.485633346823149 NA NA NA 0.0963558227823707 2.04756123412538 0.891291360736929 0.602223892389817 1.01173613921489 1.37307047464878 0.746757626563373 0.025 -0.475 0.337245379738298 0.421556724672872 -0.370969917712127 NA 0.168622689869149 -0.354107648725212 0.643360416731522 0.186782056470442 -0.186782056470442 -0.830142473201963 0.145274932810344 0.207535618300491 -0.601853293071423 -0.103767809150245 -0.767881787711816 0.145274932810344 -0.91315672052216 1.97158837385466 0.45657836026108 -0.0830142473201963 1.74329919372412 0.0622606854901473 -0.892403158692111 -1.16219946248275 -1.30747439529309 -0.726374664051718 -0.996170967842356 -1.1829530243128 0.0622606854901473 -0.809388911371914 0.0830142473201964 -0.290549865620687 0.498085483921178 -1.01692452967241 -0.352810551110834 1.86782056470442 1.95083481202461 2.76022372339653 2.2413846776453 0.311303427450736 0.249042741960589 0.290549865620687 0.581099731241374 0.498085483921178 -0.705621102221669 0.0207535618300491 -0.249042741960589 1.63953138457388 0.726374664051718 -0.290549865620687 NA NA -0.0490538734164796 1.35 -1.3 -0.35 -0.224830253158865 -2.11340437969333 0.314762354422411 0.539592607581276 0.809388911371914 0.629524708844822 0.314762354422411 -0.361921870938661 -0.0543214034477793 NA 1.38865744598123 0 0.614976868934543 0.329751037966335 1.97850622779801 0.599547341756974 1.97850622779801 0.629524708844822 0.239818936702789 2.3382346328522 0.0299773670878487 NA -0.659502075932671 -0.479637873405579 1.01923048098685 0.149886835439243 -0.269796303790638 0.479637873405579 0.0299773670878487 -2.18834779741295 -1.07918521516255 -0.539592607581276 -0.509615240493427 NA 0.269796303790638 0.359728405054184 -2.12839306323726 0 0.989253113899006 2.84784987334562 NA 0.299773670878487 5.6657223796034 -0.44966050631773 0.149886835439243 -0.359728405054184 1.07918521516255 0.119909468351395 -0.569569974669125 -1.25904941768964 -0.269796303790638 -2.42816673411574 -0.839366278459763 -0.539592607581276 -0.869343645547612 -1.07918521516255 -0.209841569614941 -2.78789513916993 0.089932101263546 -0.209841569614941 0.179864202527092 -0.149886835439243 0.68947944302052 3.02771407587272 0.239818936702789 -0.68947944302052 -0.299773670878487 1.97850622779801 -0.329751037966335 -0.569569974669125 -0.929298379723309 -0.839366278459763 2.42816673411574 NA 2.09841569614941 -0.209841569614941 -0.299773670878487 1.58880045565598 1.01923048098685 -0.239818936702789 -2.60803093664284 -0.929298379723309 -0.989253113899006 NA 2.72794040499423 0.809388911371914 2.78789513916993 0.569569974669125 -0.749434177196217 -0.119909468351395 0.659502075932671 3.05769144296057 -1.0492078480747 0.149886835439243 0.44966050631773 0.269796303790638 -0.0299773670878487 1.07918521516255 -0.269796303790638 -0.209841569614941 -0.239818936702789 NA 0.329751037966335 NA 0.929298379723309 0.749434177196217 -0.119909468351395 -1.37895888604104 0.0599547341756974 0.089932101263546 -0.959275746811158 -1.0492078480747 1.40893625312889 0.599547341756974 -1.46889098730459 1.79864202527092 -0.220170558792878 0.10492078480747 -3.40243116447082 -2.54807620246714 1.01923048098685 0 0.151760420882234 0.455281262646702 2.17523269931202 -0.674490759476595 -0.411274853339387 -0.213862923736481 -0.0694328722990613 -0.95 -1.9 -1.1 -0.636312037242071 -0.712669481711119 NA NA NA NA NA NA NA NA 0.0499999999999999 -0.25 NA NA NA 0.199705706994717 NA
RV0472C NA 0.312077814086186 0.0704691838259129 -1.4194507027791 -0.734892917041663 -1.19797612504052 0.493529824007265 0.032901988267151 -1.6121974250904 -1.21737356588459 1.05286362454883 1.28317754241889 0.423965620242431 0.260598702525048 -0.629524708844822 -2.11340437969333 0.359728405054184 -0.134898151895319 0.854354962003687 -0.134898151895319 0.269796303790638 -0.359728405054184 0.134898151895319 -0.989253113899006 0.224830253158865 1.54736115409337 -1.25262569617082 1.25262569617082 -1.46139664553262 0.529957025303039 1.20444778477963 -0.594194240491286 -0.240889556955927 -0.0802965189853089 0.144533734173556 2.07165018982097 1.55 0.0232583020509171 0.907073779985766 0.116291510254585 -0.0697749061527512 0.16280811435642 -0.627974155374761 0.177497568283315 NA 0.674490759476595 -0.319495622909966 -0.85198832775991 -0.993986382386561 -0.354995136566629 -0.887487841416573 -0.567992218506606 -0.461493677536618 -0.354995136566629 0.958486868729898 0.745489786789921 0 0.354995136566629 0.496993191193281 -0.993986382386561 0.0709990273133258 -1.02948589604322 -1.38448103260985 NA -0.638991245819932 -0.24849659559664 -1.02948589604322 -0.141998054626652 -0.0354995136566629 0.390494650223292 -2.91096011984636 -1.38448103260985 0.390494650223292 0.816488814103247 1.66847714186316 1.02948589604322 0.532492704849943 -0.106498540969989 0.816488814103247 0.709990273133258 0.638991245819932 -0.354995136566629 -0.461493677536618 1.27798249163986 0.0709990273133258 0.0709990273133258 0.212997081939977 3.54840790855078 -0.0586513703892692 -0.674490759476595 -0.2 0.15 -1.4 NA NA NA NA NA NA NA NA 0.815009667700886 -0.632335087009308 NA NA NA 1.34898151895319 1.09604748414947 0.969580466747606 1.3068258464859 -0.0843113449345744 -2.36071765816808 1.51760420882234 NA NA -0.590179414542021 -0.716646431943882 -0.75880210441117 -1.47544853635505 0.168622689869149 0.674490759476595 -0.800957776878457 -2.02347227842979 -0.29508970727101 -1.51760420882234 -0.210778362336436 -0.0843113449345744 -1.93916093349521 -0.168622689869149 -1.51760420882234 -0.126467017401862 0.337245379738298 1.09604748414947 2.10778362336436 0.505868069607446 4.76359098880345 -0.674490759476595 -0.590179414542021 -0.505868069607446 1.55975988128963 0 -0.252934034803723 -0.927424794280318 -0.843113449345744 -2.10778362336436 -1.47544853635505 -0.927424794280318 -1.18035882908404 -1.22251450155133 0.210778362336436 -6.15472818022393 NA 0.843113449345744 0.632335087009308 -0.210778362336436 -0.0421556724672872 0.379401052205585 0.800957776878457 NA -0.632335087009308 1.05389181168218 -0.505868069607446 -1.43329286388776 -0.632335087009308 -0.969580466747606 1.05389181168218 1.72838257115878 0.716646431943882 -0.716646431943882 0.337245379738298 3.16167543504654 3.37245379738298 -1.34898151895319 -0.75880210441117 -0.0843113449345744 NA -1.55975988128963 2.99305274517739 1.51760420882234 1.85484958856064 -0.716646431943882 NA -0.29508970727101 1.81269391609335 3.6253878321867 -0.29508970727101 0.421556724672872 1.05389181168218 -0.168622689869149 0.716646431943882 0.252934034803723 1.05389181168218 -0.0421556724672872 -0.0843113449345744 1.3068258464859 1.6440712262242 4.9322136786726 1.72838257115878 0.505868069607446 0.29508970727101 -0.379401052205585 0.0843113449345744 -0.337245379738298 -1.09604748414947 -1.51760420882234 0.379401052205585 0.29508970727101 NA 2.19209496829893 0.2 0.197158837385466 0.0726374664051718 -1.04805487241748 1.94045803110959 1.67066172731895 -1.36721099893904 0.0182294799858539 0.455736999646348 -0.791793500255133 -0.586513703892692 0.175954111167807 -0.654051645553062 -1 -1.45 -1.2 -0.524603924037352 -0.0749434177196217 -0.137964018983849 -0.0613173417705996 -0.643832088591295 -3.38778313282563 0 2.10011895564304 -0.865835655782012 -0.521414842432262 0.55 0.45 -0.42666501 -0.528804645 0.42666501 0.270382655 -0.40767061
RV0473 -0.128474430376495 -0.192711645564742 -0.289067468347112 0.0642372151882471 -0.867202405041337 -0.385423291129483 0.0381787222345243 -0.343608500110718 -1.18354038927025 -0.165441129682938 1.36170775969803 0.369060981600401 -0.433601202520668 -0.141998054626652 -0.691785394334969 -2.83632011677337 0.864731742918712 0.415071236600982 1.2106244400862 -2.66337376818963 -0.207535618300491 -0.276714157733988 1.45274932810344 -1.10685663093595 1.45274932810344 NA -2.05045190880885 2.05045190880885 -0.23125397467769 1.73440481008267 0.655219594920121 -0.963558227823707 0.0770846582258966 0.886473569597811 1.23335453161435 2.05897179208645 1.725 0.404694455685957 -0.584558658213049 0.674490759476595 0.674490759476595 1.39394756958496 -0.944287063267233 0.234605481557077 -0.175954111167807 0.967747611422941 -1.99414659323515 -0.351908222335615 -0.733142129865864 -0.527862333503422 -0.850444870644403 -1.14370172259075 -0.557188018698057 -0.850444870644403 -0.410559592724884 1.08505035220148 0.498536648308788 1.40763288934246 1.46628425973173 0 -0.175954111167807 -2.72728872310101 0.175954111167807 -0.439885277919519 0.32258253714098 -0.674490759476595 -1.02639898181221 -0.586513703892691 -0.263931166751711 0.821119185449768 -1.14370172259075 -0.293256851946346 0.175954111167807 0.909096241033672 3.10852263063126 NA 0.0879770555839037 0.586513703892691 0 0.439885277919519 1.20235309298002 -1.02639898181221 -0.498536648308788 1.34898151895319 -0.234605481557077 0.439885277919519 -0.32258253714098 2.73442199787809 1.07553931916538 -1.65556822780619 0.9 -0.2 0 -1.55 -2.5 -0.05 -0.2 0.4 0.5 0.2 0.25 1.15463672384976 NA 1.69157999995718 -0.0642372151882471 1.00638303794921 0.354995136566629 1.10048492335655 0.461493677536618 0.603491732163269 0.354995136566629 -0.958486868729898 1.88147422380313 -0.496993191193281 NA -0.745489786789921 -0.532492704849943 0.496993191193281 -1.17148395066988 -0.354995136566629 0.390494650223292 -0.461493677536618 -1.13598443701321 -0.887487841416573 -0.922987355073235 -2.44946644230974 0.212997081939977 -1.84597471014647 -0.425994163879955 -2.12997081939977 -1.20698346432654 -0.461493677536618 0.958486868729898 1.13598443701321 0.461493677536618 2.41396692865308 -0.354995136566629 -0.319495622909966 -0.496993191193281 -0.141998054626652 -0.0709990273133258 -0.887487841416573 -1.95247325111646 -0.461493677536618 -1.73947616917648 -0.922987355073235 -0.780989300446584 0.177497568283314 -0.603491732163269 0.390494650223292 -2.69796303790638 -0.674490759476595 0.283996109253303 0.319495622909966 -0.283996109253303 0.709990273133258 3.23045574275632 0.567992218506606 -0.141998054626652 -0.425994163879955 0.780989300446584 -0.674490759476595 -1.63297762820649 -1.95247325111646 -0.319495622909966 1.52647908723651 2.27196887402643 1.56197860089317 -1.10048492335655 -0.603491732163269 4.36644017976954 3.37245379738298 -0.816488814103247 -0.674490759476595 -0.958486868729898 -0.958486868729898 NA 1.13598443701321 0.958486868729898 3.94044601588958 -1.63297762820649 -0.0354995136566629 -1.73947616917648 2.05897179208645 2.34296790133975 -0.674490759476595 -0.177497568283315 0.922987355073235 0 0.177497568283314 0.603491732163269 0.212997081939977 -0.567992218506606 -0.283996109253303 -0.390494650223292 0.425994163879955 NA 1.9169737374598 0.283996109253303 0.993986382386561 -0.993986382386561 0.461493677536618 -0.745489786789921 -0.425994163879955 -0.603491732163269 0.887487841416573 0.567992218506606 -1.63297762820649 3.19495622909966 0.314762354422411 0.218217598654193 -2.22185191356996 0.0198379635140175 0.376921306766333 2.36071765816808 -0.618283196186879 0.0187358544299053 1.55507591768215 -0.68771606848594 -0.89932101263546 -1.00512348471022 -0.564369819153886 -0.8 -1.4 0.100262139922197 -0.856785559335134 -0.0546884399575617 -0.753842613532665 -0.277731489196245 -0.277731489196245 -2.61861118385031 2.06314820545782 2.57893525682228 -0.871902689079501 -0.477078829873689 0.709990273133258 -0.461493677536618 0.165939376130505 -1.16258058959923 0.879741649357241 0.964965748520326 NA
RV2893 -0.224830253158865 -0.812847838343589 0.639901489759847 0.778258568626841 0.397776601742607 -0.57072295032635 0.613173417705996 -0.907496658204873 -0.613173417705996 NA 1.34898151895319 0 NA -0.35 -0.7935185405607 -0.63481483244856 0.87287039461677 0.7935185405607 1.30930559192516 0.595138905420525 0.277731489196245 -0.23805556216821 0.87287039461677 0.23805556216821 1.34898151895319 NA NA NA -0.134898151895319 0.696973784792482 1.43891362021674 -2.36071765816808 -0.494626556949503 1.12415126579433 1.05670218984667 1.10048492335655 NA 0.928416692456019 0.309472230818673 0.119027781084105 0.706231501099023 -0.452305568119599 -0.253925932979424 0.922262875202691 -0.481779113911854 1.11497452076743 -1.94088157318775 -1.00485358044472 -1.17003499092879 -0.481779113911854 -0.0137651175403386 -0.454248878831176 -0.72955122963795 -0.234006998185757 0.509309348992531 0.812141934879982 1.74816992762301 3.04209097641485 0.536839584073208 -0.481779113911854 -1.25262569617082 -0.894732640122014 NA -0.289067468347112 -0.0137651175403386 -0.041295352621016 -0.454248878831176 -0.20647676310508 -0.509309348992531 NA -0.867202405041337 -0.31659770342779 0.509309348992531 1.39027687157421 1.58298851713895 NA NA NA 2.16112345383317 -0.399188408669821 1.58298851713895 -0.0137651175403386 -0.0963558227823707 NA 0.31659770342779 0.344127938508467 0.674490759476595 NA NA -1.72254563189407 1.27798249163986 -0.816488814103247 -0.35 NA NA NA NA NA NA NA 0.0552861278259504 1.57929543682325 NA NA NA NA 0 1.57381177211206 0.199849113918991 0.199849113918991 0.0499622784797478 -1.02422670883483 NA -0.724453037956343 -0.674490759476595 -0.374717088598108 -0.149886835439243 0.374717088598108 -0.374717088598108 NA -0.349735949358235 -0.624528480996847 0.5745662025171 -0.974264430355082 NA -1.17411354427407 -0.149886835439243 NA NA NA -0.599547341756973 0.624528480996847 1.19909468351395 0.924302151875334 1.09917012655445 3.24754810118361 NA -0.424679367077856 0 2.07343455690953 0.549585063277226 -0.649509620236721 -0.774415316436091 -0.324754810118361 -0.824377594915839 -0.849358734155713 0.124905696199369 -1.12415126579433 -0.89932101263546 -0.0749434177196217 -5.19607696189377 NA 0.5745662025171 -0.0749434177196217 -0.0249811392398739 0.349735949358235 2.1983402531089 -0.549585063277226 -2.2982648100684 -0.599547341756973 NA -0.0999245569594956 -0.0999245569594956 NA -1.87358544299054 1.0492078480747 1.82362316451079 0.399698227837982 -0.499622784797478 -0.374717088598108 NA 1.67373632907155 -0.124905696199369 -0.949283291115208 -1.7236986075513 -0.274792531638613 NA 0.949283291115208 -0.299773670878487 NA -0.874339873395586 0.149886835439243 -0.699471898716469 0.474641645557604 NA -0.89932101263546 -0.0499622784797478 0.724453037956343 -0.124905696199369 0.499622784797478 0.549585063277226 -0.0499622784797478 -0.299773670878487 -0.399698227837982 0.674490759476595 0.949283291115208 NA 0.849358734155713 0.374717088598108 0.549585063277226 -1.02422670883483 0.824377594915839 -0.0249811392398739 0.499622784797478 0.424679367077856 0.699471898716469 0.974264430355082 -0.0249811392398739 1.94852886071016 0.755429650613787 0.485633346823149 -1.99649264805072 NA NA NA -0.304182107214935 1.89121918833634 0.171929017121485 -0.325055787699564 0.0975167363098692 -0.422572524009433 -0.237183563771989 -0.55 -1.45 NA -0.316167543504654 -1.01173613921489 NA NA NA NA NA NA NA NA -0.0749434177196217 -1.27403810123357 NA NA NA NA NA
RV3520C -0.544780998038788 -0.518839045751227 1.1414459006527 -0.907968330064647 -0.492897093463666 -1.29709761437807 0.775664373398084 -1.68622689869149 -0.708215297450425 -0.269796303790638 0.674490759476595 1.2478079050317 0.25 0.9 -0.85 -1.9 -0.15 -0.35 -0.25 -1.85 0 -0.25 0.5 -0.4 0.4 0.955528575925177 NA NA -0.770846582258966 1.9752943670386 0 -0.819024493650151 0.0963558227823708 0.433601202520668 0.819024493650151 1.6 -0.125 0.412188797457919 -0.0374717088598108 0.637019050616784 NA 1.27403810123357 0.112415126579433 0.337245379738298 -1.45015513287468 0.876837987319574 -0.978011601241063 -0.741939835424255 -2.66423849993255 -1.68622689869149 -0.640766221502765 -1.75367597463915 -0.674490759476595 -1.61877782274383 0.876837987319574 0.978011601241063 0.505868069607446 1.41643059490085 0.978011601241063 -0.640766221502765 -1.04546067718872 -0.809388911371914 -1.85484958856064 0.168622689869149 -1.04546067718872 -0.607041683528936 -0.472143531633617 0 -0.472143531633617 0.472143531633617 -0.404694455685957 -0.236071765816808 0.505868069607446 0.674490759476595 1.71995143666532 1.78740051261298 -0.236071765816808 0.505868069607446 1.11290975313638 0.337245379738298 NA 0.101173613921489 -0.134898151895319 0.101173613921489 1.41643059490085 -0.0337245379738298 0.978011601241063 3.19708619991906 1.06569539997302 -0.65 0.05 -0.55 -0.674490759476595 NA NA NA NA NA NA NA 0.370969917712127 0.56657223796034 -0.776126353370329 0.229326858222042 -0.458653716444085 0.741939835424255 -0.129709761437807 0.985794186927331 0.830142473201963 3.03520841764468 -0.0518839045751227 -1.55651713725368 0.18159366601293 0.0518839045751227 NA 0.0778258568626841 0 0.752316616339279 -0.337245379738298 NA 1.19332980522782 0 -1.71216885097905 -0.856084425489525 -1.66028494640393 -0.882026377777086 -0.363187332025859 NA -0.544780998038788 0.155651713725368 -0.181593666012929 0.0778258568626841 NA NA 0.337245379738298 2.15318203986759 0.0778258568626841 -0.466955141176104 -0.907968330064647 0.38912928431342 0 -0.830142473201963 -0.544780998038788 0.0778258568626841 -0.544780998038788 0.103767809150245 0.207535618300491 -0.544780998038788 -0.674490759476595 0.596664902613911 -3.96911869999689 -0.0518839045751227 0.648548807189034 0.337245379738298 0.259419522875614 0.0778258568626841 1.01173613921489 0.856084425489525 -1.01173613921489 -0.129709761437807 1.06362004379002 -0.622606854901472 NA -0.518839045751227 -0.466955141176104 1.19332980522782 1.32303956666563 -0.129709761437807 -0.518839045751227 -0.622606854901472 0.985794186927331 3.03520841764468 -0.907968330064647 -0.752316616339279 0.207535618300491 -1.27115566209051 -1.1414459006527 1.66028494640393 0.544780998038788 1.50463323267856 -0.181593666012929 -0.518839045751227 -1.50463323267856 1.01173613921489 NA 0.441013188888543 0.518839045751227 1.21927175751538 0.544780998038788 0.311303427450736 -0.155651713725368 0.907968330064647 -0.804200520914402 -0.441013188888543 0.856084425489525 1.91970446927954 1.76405275555417 0.155651713725368 -0.155651713725368 0.726374664051718 -0.233477570588052 0.285361475163175 0 -0.804200520914402 -1.71216885097905 0.311303427450736 0.285361475163175 NA 1.55651713725368 -0.0709990273133258 0.581268459386334 NA -3.02698292057789 NA 0.767713059566856 -0.643832088591295 0.766466772132495 1.62490955692089 -0.117302740778538 -0.645165074281961 -0.762467815060499 -0.320383110751383 -0.284784987334562 -0.224830253158865 -0.257893525682228 -0.199030060173421 -0.574975729389884 -0.824377594915839 -0.0749434177196217 -0.824377594915839 -0.0249811392398739 1.30734628688673 -0.12490569619937 -0.674490759476595 -0.493284286781391 0.025 -1.925 -1.02172648537124 0.252969992041928 -0.252969992041929 1.10141060708048 -0.781436897618572
RV3521 -0.107918521516255 NA 0.134898151895319 -1.02522595440442 -1.05220558478349 -0.620531498718468 0.141998054626652 -0.390494650223292 -0.212997081939977 -0.496993191193281 0.425994163879955 0.709990273133258 0.192711645564741 1.48950042717748 -1.15225504743918 0.0281037816448582 1.01173613921489 0.337245379738298 0.505868069607446 -1.09604748414947 -0.112415126579433 -0.0562075632897162 -0.0843113449345744 -0.477764287962588 0.562075632897163 NA NA NA -0.1 -0.55 1.05 -1.9 0.55 -0.2 -0.65 -0.325616228712839 0.659161424033945 -0.255841322560088 0.395391134865591 1.0931401963931 0.953590384087601 0.441907738967425 -0.674490759476595 1.6129126857049 0.117302740778538 0.234605481557077 -0.997073296617575 -0.615839389087326 -1.58358700051027 -1.08505035220148 -1.43695857453709 -0.821119185449768 -0.997073296617575 -0.439885277919519 0 0.733142129865864 -0.0586513703892691 1.23167877817465 0.821119185449768 -1.524935630121 -0.439885277919519 -1.93549522284588 -0.439885277919519 -0.527862333503422 -0.263931166751711 0.0293256851946346 -0.615839389087326 -0.293256851946346 0.0586513703892692 -0.117302740778538 -1.40763288934246 -0.381233907530249 0.263931166751711 -0.0586513703892691 -0.821119185449768 NA 0.117302740778538 0.439885277919519 0.32258253714098 0.293256851946346 0.674490759476595 -0.0879770555839037 0.263931166751711 0.645165074281961 -0.146628425973173 0.821119185449768 0.205279796362442 0.279099624611005 0.674490759476595 -1.6637438733756 -0.316167543504654 -1.37005935518683 0 -0.39675927028035 -0.833194467588735 0 0.674490759476595 0.515787051364455 0.277731489196245 0.31740741622428 1.1 0.31740741622428 NA 0.593954549389837 0.0402681050433788 -0.231541603999428 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 0.168622689869149 0.0421556724672872 -3.83616619452314 -1.37005935518683 0.990658302981249 2.59257385673816 -0.401824282241376 0.258315610012313 1.63599886341132 -0.184941014695195 -0.250214313999382 0.0326366496520933 -0.50228035280172 NA NA NA -0.435608615495301 -2.40287333063537 0.467468843201601 -0.654456380482241 0.146918779291932 -0.494181348527406 1.05514396036933 1.06850021303223 NA NA 0.168622689869149 -1.10541541136442 -1.134099865 NA 0.11490715 NA -0.81640923199369
RV3523 -1.00010698818943 -0.534940947171093 0.0930332082036684 -1.0931401963931 -0.186066416407337 -0.302357926661922 1.36124498730731 -0.919760126558993 -0.331113645561238 -0.576383012643636 0.110371215187079 1.92536453159683 NA 0.719456810108368 0.269796303790638 -0.101173613921489 0.438418993659787 0.607041683528936 1.14663429111021 -1.75367597463915 1.07918521516255 0.202347227842979 -0.269796303790638 -1.38270605692702 0.708215297450425 NA -0.23805556216821 0.23805556216821 -0.106498540969989 0.390494650223292 0.674490759476595 -1.95247325111646 0.603491732163269 0.674490759476595 0.603491732163269 0.3 0 NA NA NA NA NA NA 0.590179414542021 -0.0281037816448581 0.281037816448581 -0.0843113449345744 NA 0.0281037816448581 0.112415126579433 -0.477764287962588 -0.365349161383156 -0.196726471514007 -0.0281037816448581 1.01173613921489 0.618283196186879 0.730698322766312 1.63001933540177 0.112415126579433 0.252934034803723 0.0281037816448581 0.421556724672872 NA -0.224830253158865 -0.702594541121453 0.0562075632897163 -0.562075632897163 0.252934034803723 0.0562075632897163 0.0843113449345744 0.224830253158865 0.562075632897163 -0.112415126579433 1.18035882908404 1.85484958856064 NA -0.0562075632897163 0.421556724672872 0.786905886056028 -0.0562075632897163 -0.365349161383156 0 -0.337245379738298 0.75880210441117 0.674490759476595 0.0562075632897163 0.590179414542021 NA NA -0.674490759476595 0.613173417705996 0 -2.35 -0.337245379738297 -1.10809196199726 1.34898151895319 1.10809196199726 1.39715943034438 0.240889556955927 0.337245379738298 NA 1.16502949364139 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 0.282850963651475 NA NA NA NA NA -0.46250794935538 0 1.96565878476036 -0.954157659747379 -0.822549706678775 -0.263215906137208 -0.559333800541567 0.0499999999999999 -0.95 0.240072982186585 -0.648548807189034 -1.42680737581587 NA NA NA NA NA NA NA NA -0.175 -0.175 NA -0.674490759476595 0 NA NA
[+] Show/hide bicluster #249 motif PSSM #1. bicluster 249 motif PSSM #1 Mycobacterium tuberculosis H37Rv 24x4
POSITION A C G T
1 0.666667 0 0 0.333333
2 0.333333 0.333333 0.166667 0.166667
3 0 0.333333 0 0.666667
4 0 0.333333 0.666667 0
5 0 0 0.666667 0.333333
6 0.333333 0 0.666667 0
7 0 1 0 0
8 0.333333 0.666667 0 0
9 0.333333 0 0.666667 0
10 0 0 1 0
11 0 1 0 0
12 0.666667 0 0.333333 0
13 0 0 0.666667 0.333333
14 0 0.166667 0.833333 0
15 1 0 0 0
16 0 1 0 0
17 0.333333 0.666667 0 0
18 0 0.666667 0.333333 0
19 0 1 0 0
20 0 0.666667 0.333333 0
21 1 0 0 0
22 0.666667 0 0.333333 0
23 0 0.333333 0 0.666667
24 0.166667 0 0 0.833333 [+] Show/hide bicluster #249 motif PSSM #2. bicluster 249 motif PSSM #2 Mycobacterium tuberculosis H37Rv 23x4
POSITION A C G T
1 1 0 0 0
2 0 0 1 0
3 0 0 1 0
4 0.5 0 0.5 0
5 0 1 0 0
6 1 0 0 0
7 0.5 0 0.5 0
8 0 0 0 1
9 0 0 1 0
10 0 0 0 1
11 0 0.5 0 0.5
12 0 0 1 0
13 0.5 0 0 0.5
14 0.5 0.5 0 0
15 1 0 0 0
16 0 1 0 0
17 0.5 0.5 0 0
18 0 0 0.5 0.5
19 0 0 0 1
20 0.5 0 0 0.5
21 0.5 0 0.5 0
22 0 0.5 0 0.5
23 0 0 0 1 |