Bicluster 261 (zzz

GENES 2867:::H37Ra..Dubos.media.replicate.1 2867:::H37Ra..Sauton.s.media.replicate.4 2867:::H37Rv..7H9.shake.replicate.2 2867:::H37Rv..7H9.shake.replicate.4 2867:::H37Rv..Sauton.s.media.replicate.1 2867:::H37Rv..Sauton.s.media.replicate.2 2885:::H37Rv..7H9.roll.replicate.2 2885:::Strain.1006...replicate.4 2885:::Strain.1254...replicate.1 2885:::Strain.9802501..replicate.3 2885:::Strain.H37Ra..replicate.4 4055:::H37Rv.Vs.M.bovis.rep1 4055:::H37Rv.Vs.M.bovis.rep3 4055:::H37Rv.Vs.M.bovis.rep4 4060:::H37Rv.0.05..SDS.exposure.for.1h.rep.1 4060:::H37Rv.0.05..SDS.exposure.for.1h.rep.6 4062:::CDC1551.Ctrl.vs.0.05.mM.DETA.NO.40.min.rep.1 4062:::H37Rv.0.day.ctrl.vs.Rv3132.34.KO.hypoxia.4.day.rep.4 4062:::H37Rv.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.1 4062:::H37Rv.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.3 4062:::H37Rv.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.4 4062:::H37Rv.ctrl.vs.Rv3132.3134.KO..0.05.mM.DETA.NO.40min.rep.3 4062:::H37Rv.ctrl.vs.Rv3132.34.KO..complemented...0.05.mM.DETA.NO.40min.rep.1 4062:::H37Rv.ctrl.vs.Rv3132.34.KO..complemented...0.05.mM.DETA.NO.40min.rep.2 4062:::H37Rv.ctrl.vs.Rv3132.34.KO..complemented...0.05.mM.DETA.NO.40min.rep.3 4062:::H37Rv.ctrl.vs.Rv3132.34.KO..complemented...0.05.mM.DETA.NO.40min.rep.4 4062:::MTB.strain.1254.Ctrl.vs.0.005.mM.DETA.NO.40min.rep.1 4062:::MTB.strain.1254.Ctrl.vs.0.005.mM.DETA.NO.40min.rep.3 4062:::MTB.strain.1254.Ctrl.vs.0.005.mM.DETA.NO.40min.rep.4 4062:::MTB.strain.1254.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.5 4062:::MTB.strain.1254.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.7 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.1hr.rep.3 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.40min.rep.1 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.40min.rep.4 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.5min.rep.2 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.KCN.20min...0.05.mM.DETA.NO.40min.rep.2 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.KCN.20min...0.05.mM.DETA.NO.40min.rep.3 4062:::MTB.strain.1254.Ctrl.vs.2hr.Hypoxia.rep.2 4062:::MTB.strain.1254.Ctrl.vs.high.aeration...0.01.mM.DETA.NO.rep.2 4062:::MTB.strain.1254.Ctrl.vs.high.aeration...0.05.mM.DETA.NO.rep.1 4062:::MTB.strain.1254.Ctrl.vs.low.aeration...0.05.mM.DETA.NO.rep.1 4068:::H37Rv.delta.mprAB.mutant.vs..H37Rv.delta.mprAB.mutant.SDS.treated.rep.4 4068:::H37Rv.SDS.treated.vs..H37Rv.delta.mprAB.mutant.SDS.treated.rep.3 4068:::H37Rv.SDS.treated.vs..H37Rv.delta.mprAB.mutant.SDS.treated.rep.5 4068:::H37Rv.vs..H37Rv.delta.mprAB.mutant.rep.3 4068:::H37Rv.vs..H37Rv.delta.mprAB.mutant.rep.4 4068:::H37Rv.vs..H37Rv.SDS.treated.rep.2 4068:::H37Rv.vs..H37Rv.SDS.treated.rep.4 4068:::H37Rv.vs..H37Rv.SDS.treated.rep.5 4082:::H37Rv.wild.type.Vs.Rv3676.null.7 4082:::Rv3676.null.Vs.H37Rv.wild.type.7 4084:::High.iron.wt.vs.high.iron.ideR.Complement.1a 4089:::H37Rv.wild.type.vs..H37Rv.whiB7.null.rep.2 4089:::H37Rv.wild.type.vs..H37Rv.whiB7.null.rep.3 4089:::H37Rv.wild.type.vs..H37Rv.whiB7.null.rep.4 4089:::H37Rv.wild.type.vs..H37Rv.whiB7.null.rep.5 4089:::MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.15.min.rep.3 4089:::MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.2.hr..ref..rep.3 4089:::MTB1254.ethanol.vs..0.5.ug.ml.Tetracyclin.for.30.min.rep.3 4089:::MTB1254.ethanol.vs..0.5.ug.ml.Tetracyclin.for.30.min.rep.4 4089:::MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.15.min.rep.2 4089:::MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.2.hr.rep.2 4089:::MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.30.min.rep.3 4089:::MTB1254.ethanol.vs..100.ug.ml.Erythromycin.for.15.min.rep.1 4089:::MTB1254.ethanol.vs..25.ug.ml.Tetracyclin.for.15.min.rep.2 4099:::H37.Rv3133c.DosR.mutant.2hr.rep.6 4099:::H37Rv.hypoxia.2hr.rep.5 4101:::H37Rv.Day8.2 4101:::NRP.Day10..2 4107:::DIPED.10ug.mL.vs.DMSO.12h.1 4107:::Dubos.NRP.1vsDubos.log.phase 4107:::H2O2.4mM.vs.ctrl.8h.1 4107:::PBS.Tween.7H9 4107:::pH4.8vspH6.8..7h. 4107:::pH5.2vspH6.8..10.5h. 4107:::pH5.2vspH6.8..5.5h. 4107:::pH5.6vspH6.8..2h.A 4107:::pH5.6vspH6.8..7h. 4107:::Succinate.7H9.based.medium..1 4107:::X.109..1ug.mL..vs.DMSO..12h..replicate.2..GEO.acc.GSM28052. 4107:::X0.02mM.GSNOvsDMSO..6h 4107:::X0.1mM.GSNO.DMSO..3.5h 4107:::X0.1mM.GSNO.DMSO..6h 4107:::X0.2ug.mL.Mtmvsctrl..2h.A 4107:::X0.5uMValinomycin.70mMKClvsDMSO.6h 4107:::X0.5uMValinomycinvsDMSO.6h 4107:::X1.2mg.mL.PZA.pH5.6..5h. 4107:::X10ug.mL..109vsDMSO..6hA 4107:::X10ug.mL..59.DMSO..6h 4107:::X10ug.mL.TRZ.DMSO..6h..2 4107:::X10uM.ValinomycinvsDMSO..6h 4107:::X1mM.DNP.DMSO..6h..1 4107:::X1mM.DNP.DMSO..6h..2 4107:::X1ug.mL..109vsDMSO..6hA 4107:::X1ug.mL..111891.DMSO..12h..2 4107:::X1uM.ValinomycinvsDMSO..6h.A 4107:::X1uM.ValinomycinvsDMSO..6h.B 4107:::X20ug.mL.KCN.DMSO..6h 4107:::X24ug.mL.cltrmazole.DMS..6h..1 4107:::X2mM.ZnSO4.DMSO..6h 4107:::X4d.Dubos.NRP.1vsDubos.aero.A 4107:::X50uM.CCCP.DMSO..6h..2 4107:::X6ug.mL.MenadionevsDMSO..6h 4363:::H37Rv.hypoxia.1.day.rep.4 4363:::H37Rv.hypoxia.1.day.rep.5 4363:::H37Rv.hypoxia.12hr.rep.2 4363:::H37Rv.hypoxia.4hr.rep.4 4363:::H37Rv.hypoxia.4hr.rep.7 4363:::H37Rv.hypoxia.8hr.rep.2 4364:::H37dosR.mutant.hypoxia.1.day.rep.5 4364:::H37dosR.mutant.hypoxia.4hr.rep.5 4365:::H37Rv.diamide.1h.rep.1 4365:::H37Rv.diamide.1h.rep.6 4365:::H37Rv.sigma.H.null.mutant.diamide.1h.rep.2 4366:::H37Rv.vs.H37.sigma.H.null.mutant.rep.1 4396:::H37Rv.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.1 4396:::H37Rv.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.3 4396:::Strain.27.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.1 4489:::MTB1254.WT.vs.Rv3662c.3665c.KO.in.7H9OADC..OD.1.5.2 4523:::H37Rv.sigB.null.mutant.control.vs.0.05..SDS.for.60.min.rep.6 4523:::H37Rv.wild.type.control.vs.5mM.Diamide.for.60.min.rep.2 4575:::Purified.Human.SP.A.Uncoated.2hrs.rep1 4575:::Purified.Surfactant.Lipids.2hrs.rep.1 4583:::X20ug.ml.KCN.vs.DMSO.6hrs 4583:::X40ug.ml.Ethionamide.vs.Ethanol.6hrs.rep.2 4599:::H37Rv.wild.type.vs.sigE.mutant.in.7H9.media.rep.3 4599:::H37Rv.wild.type.vs.sigE.mutant.in.RPMI.media.for.2.hrs.rep.1 4599:::H37Rv.wild.type.vs.sigE.mutant.in.RPMI.media.for.2hrs..DS..rep.2 4599:::SigE.mutant.grown.in.7H9.vs.24hrs.after.infection.in.macrophages..DS..rep.3 4615:::AA_30uM_10.min_06 4615:::AA_30uM_10.min_07 4615:::AA_30uM_2h_08 4615:::AA_30uM_2h_09 4615:::AA_30uM_30min_03 4615:::AA_30uM_30min_05 4615:::AA_60uM_2h_T0_03 4615:::Acetate.3mM.2h.01 4615:::Acetate.3mM.30m.07 4615:::Acetate.3mM.60m.04 4615:::CHP.AA.30m.1 4615:::CK_LA_2h 4615:::CK.AA.2h 4615:::CK.for.AA.Na.4h.2 4615:::CK.OA.Na.24h.1 4615:::Glycerol_1._30M_01 4615:::L2A_30uM_10min_04 4615:::MTB1254_SDS_90MIN_02 4615:::MTB1254.0485.1._LA_10m_01 4615:::MTB1254.0485.1._OA_10m_02 4615:::MTB1254.0485.1._PA_10m_04 4615:::MTB1254.0485.1._PA_4h_02 4615:::MTB1254.0485.14._01 4615:::MTB1254.B4.1._OA_10MIN_02 4615:::MTB1254.B4.1._OA_30MIN_03 4615:::MTB1254.B4.1.Compl._PA_4h_02 4615:::MTB1254.B4.1.Compl._PA_4h_04 4615:::MTB1254.Rv3524.2._PA50.OA30_30m_01 4615:::MTB1254.Rv3524.2._PA50.OA30_30m_02 4615:::MTB1254.Rv3524.2.compl._PA50.OA30_30m_02 4615:::MTB1254TA1_OA.30min_04 4615:::MTB889_PA50_1h_03 4615:::OA_50uM_10min_02 4615:::OA_50uM_10min_03 4615:::OA_50uM_1h_01 4615:::OA_50uM_2h_09 4615:::OA_50uM_30min_01 4615:::OA_50uM_4h_05 4615:::PA_300uM_24h_T0_01 4615:::PA_50uM_10min_01 4615:::PA_50uM_10min_08 4615:::PA_50uM_10min_10 4615:::PA_50uM_24h_09 4615:::PA_50uM_2h_01 4615:::PA_50uM_2h_06 4615:::PA_50uM_2h_T0_02 4615:::PA_50uM_3d_03 4615:::PA_50uM_4h_04 4615:::PA_50uM_4h_05 4615:::PA_50uM.0.5.BSA_4h_01 4615:::PA_50uM.AA_30uM_30min_02 4615:::PA_50uM.AA_30uM_30min_03 4615:::PA_50uM.AA_30uM_30min_04 4615:::PA_50uM.OA_10uM_30min_03 4615:::PA_50uM.OA_10uM_30min_04 4615:::PA_50uM.OA_30uM_30min_02 4615:::PA_50uM.OA_30uM_30min_04 4615:::Rv.3524.1._01 4615:::Rv.MT71_100803_01 4615:::Rv.p0485.1._300uM.PA_10m 4615:::Starvation_1254_PA50_6h_01 4615:::Starvation_1254_PA50_6h_02 4615:::TBD1114 4615:::TBD1267 4615:::TBD1268 4615:::TBE734 4615:::Tet_500ng_30M_01 4615:::WT_85.1_PA_10min_02 4615:::X2.2..Dipyridyl_1mM_20min_01 4615:::X2.BA_100uM_30min_01 4615:::X7H9Cy3.MDGCy5.02 4630:::H37Rv.wild.type.Cy3.vs.Rv0485.Tn.mutant.Cy5.rep.3 4630:::H37Rv.wild.type.Cy5.vs.Rv0485.Tn.mutant.Cy3..DS..rep.2 4637:::H37Rv.control.vs.1mg.ml.cholesterol.for.3.hrs.rep.3 4696:::H37Rv.wt.vs.dosS.dosT.null.dosT.complemented.rapid.anaerobic.dormancy.day.6.rep.1 4696:::H37Rv.wt.vs.dosS.dosT.null.dosT.complemented.rapid.anaerobic.dormancy.day.6.rep.3 4696:::H37Rv.wt.vs.dosT.null.rapid.anaerobic.dormancy.day.6.rep.1 4696:::H37Rv.wt.vs.dosT.null.rapid.anaerobic.dormancy.day.6.rep.2 4699:::CDC1551.Ctrl.vs.clinical.isolate.1797.03_EAI.rep.1 4699:::CDC1551.Ctrl.vs.clinical.isolate.2333.99_Uganda.rep.1 4699:::CDC1551.Ctrl.vs.clinical.isolate.9532.03_Haarlem.rep.1 4703:::Clinical.isolate.2169.99_Uganda.extra.vs.intracellular.in.resting.macrophages.rep.1 4703:::H37Rv.extra.vs.intracellular.in.resting.macrophages.rep.1 4704:::Clinical.isolate.10514.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.2 4704:::Clinical.isolate.10517.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.1 4704:::Clinical.isolate.1934.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.2 4731:::X5ug.ml.Streptomycin.vs.Ethanol.6hrs 4735:::BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.2.rep.3 4735:::BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.4.rep.2 4799:::H37Rv.KatG.null..ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.3 4802:::H37Rv.ctrl.vs.relE2.overexpression.6.hr.rep.1 4802:::H37Rv.ctrl.vs.relE2.overexpression.72.hr.rep.5 4802:::H37Rv.ctrl.vs.relE3.overexpression.6.hr.rep.2 4815:::H37Rv.reaeration.for.12hrs.rep.3 4815:::H37Rv.reaeration.for.1hrs.rep.1 4815:::H37Rv.reaeration.for.1hrs.rep.2 4815:::H37Rv.reaeration.for.1hrs.rep.3 4815:::H37Rv.reaeration.for.1hrs.rep.4 4815:::H37Rv.reaeration.for.1hrs.rep.6 4815:::H37Rv.reaeration.for.1hrs.rep.8 4815:::H37Rv.reaeration.for.24hrs.rep.3 4815:::H37Rv.reaeration.for.24hrs.rep.4 4815:::H37Rv.reaeration.for.24hrs.rep.5 4815:::H37Rv.reaeration.for.4hrs.rep.1 4815:::H37Rv.reaeration.for.4hrs.rep.2 4815:::H37Rv.reaeration.for.4hrs.rep.3 4815:::H37Rv.reaeration.for.4hrs.rep.6 4815:::H37Rv.reaeration.for.6hrs.rep.2 4815:::H37Rv.reaeration.for.6hrs.rep.3 Maciag_JBacteriol2007:::H37Rv.wild.type.vs.H37Rv.FurB.null.rep.5 Maciag_JBacteriol2007:::H37Rv.wild.type.vs.H37Rv.FurB.null.rep.6 Raghavan_Nature2008:::espR.mutant.complemented.with.N.terminal.Flag.espR..RFL..rep1 RV0185 -1.03421916453078 -0.854354962003687 0.629524708844822 0.629524708844822 -1.84360807590269 -0.764422860740141 0.5 NA 0.2 0.25 0 -0.772598506309555 0.576383012643636 -0.576383012643636 -0.0396759270280349 1.19027781084105 1.386453227813 -2.09841569614941 -0.786905886056028 -0.786905886056028 -0.0374717088598109 -1.386453227813 0.149886835439243 -0.637019050616784 -1.01173613921489 -0.262301962018676 1.53634006325224 1.68622689869149 0.674490759476595 -0.0374717088598109 0.674490759476595 0.0749434177196217 0.112415126579433 1.34898151895319 0.337245379738298 -0.44966050631773 -0.44966050631773 -0.786905886056028 0.749434177196217 -0.149886835439243 -0.524603924037352 NA 0.858442784788394 1.83952025311799 -1.25700550629729 NA -0.858442784788394 NA 0.183952025311799 NA NA -0.075 0.674490759476595 -1.41425481825738 0.413397562259849 -1.32722375251846 1.19667715391009 -0.674490759476595 0.239335430782018 -0.456913095129307 0.413397562259849 -0.19581989791256 0.413397562259849 3.85112465894701 -1.24019268677955 -0.157381177211206 -0.696973784792482 0.235287474236022 -1.4901540034948 0.0293256851946346 -0.674490759476595 0.821119185449768 1.81819248206734 0.70381644467123 0.0586513703892692 0.381233907530249 1.05572466700684 0.469210963114153 0.645165074281961 0.879770555839037 NA -1.81819248206734 -4.31087572361128 2.14077501920832 -3.72436201971859 -2.3753805007654 -1.26100446336929 0.674490759476595 2.78594009349028 NA -1.84751816726198 NA NA 0.645165074281961 1.524935630121 -3.66571064932932 -1.31965583375856 NA NA NA NA 3.75368770491322 NA -0.0632335087009308 -1.04686586627097 0.737724268177526 -0.0210778362336436 0.0843113449345744 0.674490759476595 0 -0.281037816448581 -1 -0.5 -0.1 -0.674490759476595 NA NA NA -0.858442784788394 -0.674490759476595 0.0793518540560701 -0.217912399215515 -0.79901213045689 5.14299204100904 1.22251450155133 0.464649189861654 -0.404694455685957 0 -1.2290720506018 0.293256851946346 0.351908222335615 -0.557188018698057 0.263931166751711 0.381233907530249 1.02639898181221 NA 0.586513703892692 -0.146628425973173 0.381233907530249 -0.381233907530249 -0.674490759476595 1.58358700051027 1.26100446336929 0.762467815060499 0.879770555839037 1.05572466700684 -1.05572466700684 -0.527862333503422 -0.70381644467123 -0.498536648308788 1.93549522284588 0.175954111167807 -0.645165074281961 0.0293256851946346 2.08212364881905 2.40470618596003 -1.46628425973173 -0.439885277919519 -1.11437603739611 -0.205279796362442 0.263931166751711 -0.674490759476595 -2.52200892673857 -1.23167877817465 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