Bicluster 263 (zzz

GENES 2867:::H37Ra..Dubos.media.replicate.1 2867:::H37Ra..Youman.media.replicate.2 2867:::H37Rv..Youman.media.replicate.1 2867:::H37Rv..Youman.media.replicate.4 2885:::Strain.M3061a..replicate.1 4060:::H37Rv.sigE.null.0.05..SDS.exposure.for.1h.rep.3 4062:::H37Rv.ctrl.vs.Rv3132.3134.KO..0.05.mM.DETA.NO.40min.rep.4 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.KCN...2hr.hypoxia.rep.1 4062:::MTB.strain.1254.Ctrl.vs.5.0.mM.DETA.NO.40min.rep.2 4062:::MTB.strain.1254.Ctrl.vs.low.aeration..0.2..oxygen..2hr.rep.1 4062:::MTB1254.Day.0.rep.3 4062:::MTB1254.Day.0.vs.low.Oxygen.Day.4.rep.5 4062:::MTB1254.Day.0.vs.low.Oxygen.Day.4.rep.6 4068:::H37Rv.SDS.treated.vs..H37Rv.delta.mprAB.mutant.SDS.treated.rep.3 4068:::H37Rv.SDS.treated.vs..H37Rv.delta.mprAB.mutant.SDS.treated.rep.4 4089:::MTB1254.ethanol.vs..0.5.ug.ml.Erythromycin.for.15.min.rep.2 4089:::MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.30.min.rep.4 4089:::MTB1254.ethanol.vs..100.ug.ml.Erythromycin.for.15.min.rep.3 4100:::H37Rv.0.2..Oxygen..2h..6 4101:::NRP.Day10..3 4107:::DIPED..100ug.mL..DMSO..12h..1 4107:::DIPED..100ug.mL..DMSO..12h..3 4107:::DIPED..50ug.mL..DMSO..12h 4107:::DIPED.50ug.mL.vs.DMSO.12h.1 4107:::DIPED.50ug.mL.vs.DMSO.12h.2 4107:::EMB..10ug.mL..DMSO..12h 4107:::EMB.10ug.mL.vs.DMSO.12h.2 4107:::EMB.10ug.mL.vs.DMSO.12h.3 4107:::Mtm.0.2ug.mL.vs.ctrl.8h.1 4107:::Mtm.0.2ug.mL.vs.ctrl.8h.2 4107:::pH4.8vspH6.8..4h.A 4107:::pH4.8vspH6.8..5.5h. 4107:::pH4.8vspH6.8..7h. 4107:::pH5.2vspH6.8..10.5h. 4107:::pH5.2vspH6.8..5.5h. 4107:::pH5.2vspH6.8..5h. 4107:::pH5.6vspH6.8..5h. 4107:::X.109..0.1ug.mL..vs.DMSO..12h..GEO.acc.GSM28050. 4107:::X.109..1ug.mL..vs.DMSO..12h..replicate.1..GEO.ac.GSM28051. 4107:::X0.02mM.GSNOvsDMSO..6h 4107:::X0.05mM.Palmitate.10mM.Gluc..2 4107:::X0.12mg.mL.BZA.pH5.6..2h. 4107:::X0.12mg.mL.BZAvspH5.6..11h. 4107:::X0.12mg.mL.Nam.pH5.6..4h..1 4107:::X0.12mg.mL.PZA.pH5.6..2h. 4107:::X0.12mg.mL.PZA.pH5.6..4h..1 4107:::X0.12mg.mL.PZAvspH5.6..4h.A 4107:::X0.15mg.mL.TricvsEtOH..6h 4107:::X0.15mg.mL.TricvsEtOH..6hA 4107:::X0.1mM.GSNOvsDMSO..4h 4107:::X0.1mMGSNO.5ug.mLKCNvsDMSO.6h 4107:::X0.1ug.mL.Mtmvsctrl..0.33h. 4107:::X0.1ug.mL.Mtmvsctrl..1.5h. 4107:::X0.2mg.mL.AmpvsEtOH..6h 4107:::X0.2mg.mL.AmpvsEtOH..6hA 4107:::X0.2mg.mL.AmpvsEtOH..6hC 4107:::X0.2ug.mL..111891.DMSO..5.5h..2 4107:::X0.2ug.mL.INH.EtOH..6h 4107:::X0.2ug.mL.Mtmvsctrl..0.33h. 4107:::X0.2ug.mL.Mtmvsctrl..0.75h. 4107:::X0.2ug.mL.Mtmvsctrl..2h. 4107:::X0.2ug.mL.Mtmvsctrl..2h.B 4107:::X0.2ug.mL.Mtmvsctrl..4h.B 4107:::X0.2ug.mL.PA824.DMSO..6h..1 4107:::X0.2ug.mL.PA824.DMSO..6h..2 4107:::X0.4ug.mL.PA824.DMSO..6h..2 4107:::X1.2mg.mL.NamvspH5.6..10.5h. 4107:::X1.2mg.mL.PZAvspH5.6..10.5h. 4107:::X1.2mg.mL.PZAvspH5.6..7h.A 4107:::X100ug.mL.Ceph.DMSO..6h 4107:::X100ug.mL.Cphx.DMSO..6h 4107:::X100ug.mL.TriclosanvsEtOH..6h 4107:::X100ug.mL.TriclosanvsEtOH..6hA 4107:::X100ug.mLCephalexinvsEtOH.6h 4107:::X100ug.mLCephalexinvsEtOH.6hA 4107:::X100uM.DCCD.DMSO..6h 4107:::X10ug.mL..109.DMSO..6h 4107:::X10ug.mL..109vsDMSO..6hA 4107:::X10ug.mL..241vsDMSO..6h 4107:::X10ug.mL.clofazimine.DMSO..6h 4107:::X10ug.mL.EMBvsDMSO..6h 4107:::X10ug.mL.EMBvsDMSO..6hA 4107:::X10ug.mL.OfloxvsDMSO..6hA 4107:::X10ug.mL.TRZ.DMSO..6h..1 4107:::X10ug.mLchlorpromazinevsctrl.6h 4107:::X10ug.mLchlorpromazinevsctrl.6hA 4107:::X10uM.CCCP.DMSO..6h 4107:::X13ug.mL.clfzine.DMSO..6h..1 4107:::X150uM.Deferroxaminevsctrl..6hB 4107:::X1mM.DTNBvsDMSO..6h 4107:::X1ug.mL..109vsDMSO..6hA 4107:::X1ug.mL..111891.DMSO..12h..1 4107:::X1ug.mL..241vsDMSO..6h 4107:::X20ug.mL.CPZvsDMSO..6h 4107:::X20ug.mL.CPZvsDMSO..6h.A 4107:::X20ug.mL.methoxatinvsDMSO..6h 4107:::X20ug.mL.Procept.6776vsDMSO..6h 4107:::X20ug.mLProcept6778vsDMSO.6h 4107:::X20uM.DCCD.DMSO..6h..1 4107:::X250uM.DeferroxaminevsDMSO..6h 4107:::X25J.UVvs.ctrl..6h. 4107:::X25ug.mL.CPZvsDMSO..6h.A 4107:::X2mM.DTNBvsDMSO 4107:::X2mM.DTTvsDMSO..6h 4107:::X2mM.ZnSO4.DMSO..6h 4107:::X2mMb.mercaptoethanolvsDMSO.6h 4107:::X2ug.mL..111891vsDMSO..6h 4107:::X2ug.mL.SMvsEtOH..6h 4107:::X2ug.mL.SMvsEtOH..6hA 4107:::X40ug.mL.5CL.pH5.6..2h..1 4107:::X40ug.mL.5CL.pH5.6..4h..2 4107:::X40ug.mL.EtavsEtOH..6hA 4107:::X40ug.mLProcept6778vsDMSO.6hA 4107:::X4mM.H2O2vsctrl..1h. 4107:::X4mM.H2O2vsctrl..2h.A 4107:::X50ug.mL.Triclosan.DMSO..6h 4107:::X50ug.mL.TriclosanvsEtOH..6h 4107:::X50ug.mL.TriclosanvsEtOH..6hA 4107:::X50ug.mL.VerapamilvsDMSO..6h 4107:::X50ug.mLAntimycinAvsDMSO..6hB 4107:::X50uM.NigericinvsDMSO..6h 4107:::X50uM.NigericinvsDMSO..6h.A 4107:::X5ug.mL.CapvsEtOH..6h 4107:::X5ug.mL.CapvsEtOH..6hA 4107:::X5ug.mL.KCN.DMSO..6h..1 4107:::X5ug.mL.KCN.DMSO..6h..2 4107:::X5ug.mLStreptomycinvsEtOH.6hA 4107:::X60J.UV.ctrl..2h. 4107:::X60J.UVvsctrl..6h. 4107:::X60ug.mL.ChlorprovsEtOH..6h 4396:::Strain.32.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.1 4489:::MTB1254.WT.vs.Rv3662c.3665c.KO.in.7H9OADC.Exp2..OD1.4 4523:::H37Rv.sigB.null.mutant.control.vs.0.05..SDS.for.60.min.rep.3 4523:::H37Rv.sigB.null.mutant.control.vs.5mM.Diamide.for.60.min.rep.4 4523:::H37Rv.wild.type.control.vs.0.05..SDS.for.60.min.rep.4 4523:::H37Rv.wild.type.control.vs.0.05..SDS.for.60.min.rep.6 4523:::H37Rv.wild.type.control.vs.5mM.Diamide.for.60.min.rep.1 4523:::H37Rv.wild.type.vs.H37Rv.sigB.null.mutant.rep.2 4523:::H37Rv.wild.type.vs.H37Rv.sigB.null.mutant.rep.5 4523:::H37Rv.wild.type.Vs.H37Rv.wild.type.rep.4 4523:::H37Rv.wild.type.Vs.H37Rv.wild.type.rep.5 4575:::Purified.Surfactant.Lipids.30min.rep.1 4575:::Whole.Lung.Surfactant.2hrs.rep.1 4583:::X0.2mg.ml.TLM.vs.Ethanol.6hrs.rep.2 4583:::X0.2ug.ml.Isoniazid.vs.Ethanol.6hrs.rep.2 4583:::X0.2ug.ml.PA.824.vs.DMSO.6hrs.rep.1 4583:::X0.2ug.ml.PA.824.vs.DMSO.6hrs.rep.2 4583:::X0.32ug.mL.Cerulenin.vs.Ethanol.6hrs.rep.2 4583:::X0.4ug.ml.PA.824.vs.DMSO.6hrs.rep.3 4583:::X0.4ug.ml.PA.824.vs.DMSO.6hrs.rep.4 4583:::X0.5ug.mL.Cerulenin.vs.DMSO..6hrs.rep.3 4583:::X0.5ug.mL.Cerulenin.vs.Ethanol..6hrs.rep.1 4583:::X0.5ug.mL.Cerulenin.vs.Ethanol..6hrs.rep.2 4583:::X130ug.ml.TLM.vs.DMSO.6hrs.rep.1 4583:::X130ug.ml.TLM.vs.DMSO.6hrs.rep.2 4583:::X2ug.ml.PA.824.vs.DMSO.6hrs.rep.2 4583:::X40ug.ml.Ethionamide.vs.Ethanol.6hrs.rep.1 4583:::X40ug.ml.Ethionamide.vs.Ethanol.6hrs.rep.2 4583:::X5ug.ml.KCN.vs.DMSO.6hrs.rep.1 4583:::X5ug.ml.KCN.vs.DMSO.6hrs.rep.2 4615:::AA_30uM_10.min_06 4615:::AA_30uM_1h_05 4615:::AA_30uM_2h_09 4615:::AA_30uM_30min_03 4615:::AA_30uM_4h_05 4615:::Acetate.3mM.10m.06 4615:::Acetate.3mM.10m.07 4615:::Acetate.3mM.30m.04 4615:::CHP_25uM_1h_01 4615:::CHP.AA.2h.1 4615:::CK_LA_2h.3 4615:::CK_OA_NA_2h.02 4615:::CK.for.AA.NA.24h 4615:::CK.for.MDG.24h.PA.NA 4615:::CK.for.MDG.4h.PA.NA 4615:::CK.for.MDG.OA.4h 4615:::CK.for.OA.4h.1 4615:::CK.for.OA.NA..2h 4615:::CK.PA.Na.2h.01 4615:::Glucose_40mM_1h.OA_50uM_10min 4615:::L2A_30uM_10min_06 4615:::MTB1254_Pellicle_14D_03 4615:::MTB1254_Pellicle_14D_04 4615:::MTB1254_SDS_90MIN_01 4615:::MTB1254_SDS_90MIN_03 4615:::MTB1254.3524.1._OA_10min_01 4615:::MTB1254.B4.1._PA_30MIN_01 4615:::MTB1254.B4.1._PA_30MIN_02 4615:::MTB1254.B4.1.Compl._OA_30MIN_04 4615:::MTB1254whiB4_SDS_90MIN_02 4615:::OA_50uM_10min_01 4615:::OA_50uM_10min.Glu_40mM_20min_01 4615:::OA_50uM_30min_05 4615:::OA_50uM_30min_06 4615:::OA_50uM_4h_05 4615:::OA_50uM_4h_07 4615:::PA_50uM_30.min_05 4615:::PA_50uM_3d_02 4615:::PA_50uM.OA_10uM_24h_02 4615:::PA_50uM.OA_10uM_2h_01 4615:::PA_50uM.OA_10uM_4h_01 4615:::PA_50uM.OA_10uM_4h_02 4615:::PA_50uM.OA_30uM_2h_01 4615:::PA_50uM.OA_30uM_2h_02 4615:::PA_50uM.OA_30uM_4h_02 4615:::PA_50uM.OA_30uM_4h_05 4615:::Rv.MT90_100503_02 4615:::SDS_60min_01 4615:::TBD426 4615:::TBD625 4615:::Test_361.3 4615:::Test.1 4615:::Test.3 4615:::Tet_5ug_30M_01 4630:::H37Rv.wild.type.Cy5.vs.Rv0485.Tn.mutant.Cy3..DS..rep.3 4696:::H37Rv.wt.vs.dosS.dosT.null.anaerobic.Gaspak24hr.rep.2 4699:::CDC1551.Ctrl.vs.clinical.isolate.2199.99_Uganda.rep.1 4699:::CDC1551.Ctrl.vs.clinical.isolate.947.01_EAI.rep.3 4699:::CDC1551.Ctrl.vs.H37Rv.rep.3 4703:::CDC1551.extra.vs.intracellular.in.resting.macrophages.rep.2 4703:::Clinical.isolate.1797.03_EAI.extra.vs.intracellular.in.resting.macrophages.rep.1 4703:::Clinical.isolate.1797.03_EAI.extra.vs.intracellular.in.resting.macrophages.rep.2 4704:::Clinical.isolate.4850.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.2 4729:::H37Rv.wild.type.vs.PepD.null.mutant.rep.1 4729:::H37Rv.wild.type.vs.PepD.null.mutant.rep.2 4731:::X0.4ug.ml.PA.824.vs.DMSO.6hrs.rep.2 4731:::X5ug.ml.Capreomycin.vs.Ethanol.6hrs.A 4735:::BCG.wild.type.vs.BCG.with.pMFdosR.at.OD.0.2.rep.1 4735:::BCG.wild.type.vs.BCG.with.pMFdosR.at.OD.0.4.rep.3 4795:::CDC1551.ctrl.vs.10.ug.ml.Thioridazine.1hr.rep.1 4795:::CDC1551.ctrl.vs.10.ug.ml.Thioridazine.4hr.rep.1 4795:::CDC1551.ctrl.vs.ctrl.at.0.hr.rep.2 4802:::H37Rv.ctrl.vs.relE2.overexpression.6.hr.rep.3 4802:::H37Rv.ctrl.vs.relE2.overexpression.72.hr.rep.2 4802:::H37Rv.ctrl.vs.relE3.overexpression.6.hr.rep.3 4815:::H37Rv.reaeration.for.1hrs.rep.4 Provvedi_Microbiology2009:::H37Rv.Control.vs.400.ug.ml.vancomycin.for.4.hrs.DS.rep.1 Raghavan_Nature2008:::espR.mutant.complemented.with.WT.espR..R...rep2 Raghavan_Nature2008:::WT.rep2 Raghavan_Nature2008:::WT.TB.rep3 Rohde_CellHostMicrobe2007:::CDC1551.ctrl.vs.pH.5.5.7H9.broth.for.2.hr RV0237 -0.346360119731224 NA 1.00262139922197 0.291671679773663 0.983632357570035 -0.856785559335135 -1.4901540034948 0.486260780087778 -1.61564065642068 0.423517453624839 0.32940246393043 0.517632443319247 0.549004106550717 0.0449660506317731 NA -0.461493677536618 1.27798249163986 -0.461493677536618 -0.763239543618252 0.127262407448414 0.889101455673694 0.551856075935396 0.459880063279497 NA 0.153293354426499 0.613173417705996 1.16502949364139 -0.0306586708852998 -0.521197405050096 -0.306586708852998 -2.14610696197099 0.0919760126558993 -0.153293354426499 -0.858442784788394 0.153293354426499 -1.28766417718259 -1.01173613921489 0.950418797444293 1.74754424046209 0.889101455673694 0.582514746820696 -1.53293354426499 -0.183952025311799 -1.47161620249439 -0.827784113903094 -0.643832088591295 -1.50227487337969 -0.183952025311799 0.0919760126558993 0.950418797444293 -1.68622689869149 0 0.275928037967698 0.643832088591295 0.306586708852998 1.77820291134739 -0.122634683541199 1.13437082275609 0.122634683541199 0.0306586708852998 -2.17676563285628 0.735808101247195 -0.367904050623597 -1.77820291134739 -2.11544829108569 -1.59425088603559 -0.306586708852998 0.398562721508897 -0.429221392394197 1.90083759488859 1.96215493665919 -1.22634683541199 -2.05413094931509 0.398562721508897 0.551856075935396 -4.62945930368027 -1.59425088603559 0.367904050623597 -0.214610696197099 -0.950418797444293 1.44095753160909 1.41029886072379 0.245269367082398 -2.02347227842979 0.398562721508897 0.674490759476595 1.65556822780619 -0.797125443017794 -0.306586708852998 0.827784113903094 1.83952025311799 0.950418797444293 1.44095753160909 0 -0.429221392394197 0.827784113903094 -0.0306586708852998 0 -0.398562721508897 1.10371215187079 0.459880063279497 -0.275928037967698 0.705149430361895 -1.28766417718259 -0.306586708852998 0.490538734164796 0.337245379738298 1.34898151895319 1.37964018983849 -0.429221392394197 -0.674490759476595 1.41029886072379 -0.521197405050096 -0.275928037967698 -1.10371215187079 -3.03520841764468 -1.99281360754449 -1.13437082275609 0.674490759476595 0.214610696197099 0.275928037967698 1.07305348098549 1.99281360754449 1.87017892400329 -0.183952025311799 -2.54466968347988 0.766466772132495 0.735808101247195 1.10371215187079 -0.827784113903094 NA 1.1 -0.601176546490009 0.733142129865864 0.0146628425973173 -2.02347227842979 -0.190616953765125 0.879770555839037 0.571850861295374 0.806456342852451 1.01173613921489 -0.912546321644805 1.28285497390647 1.05465827845431 1.59425088603559 -1.88857412653447 -2.1583704303251 0.833915848080154 -2.59985529107342 -2.18289736703334 1.15276602528727 0.613173417705996 0.318850177207118 -0.294323240498878 -0.245269367082398 -2.25647817715806 0.637700354414235 0.662227291122475 -0.613173417705996 -2.50174754424046 0.85198832775991 0.461493677536618 -0.390494650223292 0.390494650223292 0.603491732163269 -1.02948589604322 -0.177497568283315 -0.674490759476595 -2.59146449693639 -0.993986382386561 -1.17148395066988 -0.0354995136566629 -0.425994163879955 -0.24849659559664 -0.390494650223292 -0.85198832775991 0.106498540969989 -0.0709990273133258 -0.141998054626652 0.0354995136566629 1.49097957357984 -0.674490759476595 -0.283996109253303 -3.33695428372631 -2.02347227842979 0.390494650223292 0.922987355073235 0.319495622909966 0.532492704849944 -1.63297762820649 0 0.0354995136566629 1.45548005992318 0.532492704849944 0 0.177497568283315 -0.887487841416573 -0.141998054626652 -0.638991245819932 1.27798249163986 0.993986382386561 0.212997081939977 1.63297762820649 1.81047519648981 1.20698346432654 0.177497568283315 0.85198832775991 -0.425994163879955 0.177497568283315 1.38448103260985 0.141998054626652 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