|
[+] Show/hide bicluster #310 rows and columns.
bicluster 310
Mycobacterium tuberculosis H37Rv
8x237
[+] Show/hide bicluster #310 rows (genes).
bicluster 310 genes
Mycobacterium tuberculosis H37Rv
8
[+] Show/hide bicluster #310 rows (short gene names).
bicluster 310 short names
Mycobacterium tuberculosis H37Rv
8
short_name
[+] Show/hide bicluster #310 rows (long gene names).
bicluster 310 long names
Mycobacterium tuberculosis H37Rv
8
long_name
[+] Show/hide bicluster #310 rows (NCBI RefSeq gene IDs).
bicluster 310 NCBI RefSeq IDs
Mycobacterium tuberculosis H37Rv
16
[+] Show/hide bicluster #310 gene upstream sequences.
bicluster 310 upstream sequences
Mycobacterium tuberculosis H37Rv
8
upstream
[+] Show/hide bicluster #310 columns (arrays; conditions).
bicluster 310 arrays
Mycobacterium tuberculosis H37Rv
237
[+] Show/hide bicluster #310 ratios.
bicluster 310 ratios
Mycobacterium tuberculosis H37Rv
8x237
GENES 2867:::H37Ra..7H9.shake.replicate.1 2867:::H37Ra..Dubos.media.replicate.3 2867:::H37Ra..Sauton.s.media.replicate.1 2867:::H37Ra..Sauton.s.media.replicate.3 2867:::H37Ra..Sauton.s.media.replicate.4 2867:::H37Rv..7H9.shake.replicate.3 2867:::H37Rv..Dubos.media.replicate.3 2867:::H37Rv..Sauton.s.media.replicate.3 2867:::H37Rv..Youman.media.replicate.1 2867:::H37Rv..Youman.media.replicate.3 2885:::H37Rv..7H9.roll.replicate.2 2885:::Strain.1843..replicate.4 2885:::Strain.9800608..replicate.2 2885:::Strain.9802501..replicate1 2885:::Strain.M3061a..replicate.3 4060:::H37Rv.0.05..SDS.exposure.for.1h.rep.6 4062:::CDC1551.Ctrl.vs.0.05.mM.DETA.NO.40.min.rep.3 4062:::CDC1551.Ctrl.vs.0.05.mM.DETA.NO.40.min.rep.4 4062:::H37.Rv3132.34.KO.0.days.vs.Rv3132.34.KO..complemented..hypoxia.4.day.rep.2 4062:::H37.Rv3132.34.KO.0.days.vs.Rv3132.34.KO..complemented..hypoxia.4.day.rep.4 4062:::MTB.strain.1254.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.6 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.24hrs...0.5.mM.DNO.40min.rep.4 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.KCN.1hr.rep.1 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.KCN.1hr.rep.2 4062:::MTB.strain.1254.Ctrl.vs.high.aeration...0.01.mM.DETA.NO.rep.2 4062:::MTB.strain.1254.Ctrl.vs.low.aeration...0.01.mM.DETA.NO.rep.3 4062:::MTB.strain.1254.Ctrl.vs.low.aeration...0.05.mM.DETA.NO.rep.2 4062:::MTB1254.Day.0.vs.low.Oxygen.Day.4.rep.4 4084:::High.iron.wt.vs.low.iron.wt.1a 4089:::H37Rv.whiB7.null.ethanol.vs..1.0.ug.ml.Tetracyclin.for.15.min.rep.3 4089:::H37Rv.whiB7.null.ethanol.vs..1.0.ug.ml.Tetracyclin.for.15.min.rep.4 4089:::H37Rv.whiB7.null.ethanol.vs..1.0.ug.ml.Tetracyclin.for.2.hr.rep.1 4089:::H37Rv.whiB7.null.ethanol.vs..1.0.ug.ml.Tetracyclin.for.2.hr.rep.2 4089:::H37Rv.whiB7.null.ethanol.vs..1.0.ug.ml.Tetracyclin.for.2.hr.rep.3 4089:::H37Rv.whiB7.null.vs..H37Rv.whiB7.null.with.whiB7.over.expression.rep.2 4089:::H37Rv.whiB7.null.vs..H37Rv.whiB7.null.with.whiB7.over.expression.rep.3 4089:::H37Rv.wild.type.vs..H37Rv.whiB7.null.rep.1 4089:::MTB1254.control.vs..0.5.ug.ml.Streptomycin.for.15.min.rep.3 4089:::MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.24.hr..ref..rep.4 4089:::MTB1254.control.vs..25.ug.ml.Streptomycin.for.15.min.rep.3 4089:::MTB1254.control.vs..25.ug.ml.Streptomycin.for.15.min.rep.4 4089:::MTB1254.ethanol.vs..0.5.ug.ml.Erythromycin.for.15.min.rep.1 4089:::MTB1254.ethanol.vs..0.5.ug.ml.Tetracyclin.for.30.min.rep.2 4089:::MTB1254.ethanol.vs..1.0.ug.ml.Erythromycin.for.15.min.rep.1 4089:::MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.24.hr.rep.1 4089:::MTB1254.ethanol.vs..100.ug.ml.Tetracyclin.for.30.min.rep.1 4089:::MTB1254.ethanol.vs..25.ug.ml.Erythromycin.for.30.min.rep.3 4089:::MTB1254.ethanol.vs..25.ug.ml.Erythromycin.for.30.min.rep.4 4089:::MTB1254.ethanol.vs..25.ug.ml.Tetracyclin.for.15.min.rep.1 4089:::MTB1254.ethanol.vs..25.ug.ml.Tetracyclin.for.30.min.rep.1 4089:::MTB1254.ethanol.vs..25.ug.ml.Tetracyclin.for.30.min.rep.3 4089:::MTB1254.ethanol.vs..5.0.ug.ml.Erythromycin.for.30.min.rep.1 4089:::MTB1254.ethanol.vs..5.0.ug.ml.Tetracyclin.for.30.min.rep.2 4089:::MTB1254.ethanol.vs..5.0.ug.ml.Tetracyclin.for.30.min.rep.4 4089:::MTB1254.vs..MTB1254.rep4 4100:::H37Rv.0.2..Oxygen..2h..1 4101:::H37Rv.Day.0.vs.low.Oxygen.Day.4.rep.4 4101:::H37Rv.Day14.3 4101:::H37Rv.Day24.1 4101:::H37Rv.Day24.3 4101:::H37Rv.Day60.1 4101:::NRP.Day10..1 4101:::NRP.Day12..1 4101:::NRP.Day14..9 4101:::NRP.Day6..3 4107:::DIPED..100ug.mL..DMSO..12h..1 4107:::DIPED..50ug.mL..DMSO..12h 4107:::EMB.10ug.mL.vs.DMSO.12h.2 4107:::Palmitate.Glucose..1 4107:::Palmitate.Glucose..2 4107:::pH4.8vspH6.8..2h.B 4107:::pH4.8vspH6.8..4h.A 4107:::pH4.8vspH6.8..4h.B 4107:::Rif.5ug.mL.vsDMSO.2.5hA 4107:::X.109..10ug.mL..vs.DMSO..12h..replicate.1..GEO.acc..GSM28053. 4107:::X0.05mM.Palmitate.10mM.Gluc..1 4107:::X0.12mg.mL.BZA.pH5.6..2h. 4107:::X0.12mg.mL.Nam.pH5.6..2h..1 4107:::X0.12mg.mL.NamvspH5.6..5.5h. 4107:::X0.12mg.mL.NamvspH5.6..7h. 4107:::X0.12mg.mL.PZA.pH5.6..4h..1 4107:::X0.12mg.mL.PZA.pH5.6..5h. 4107:::X0.15mg.mL.TricvsEtOH..6hA 4107:::X0.1mg.mLTriclosanvsEtOH.6hC 4107:::X0.1mMGSNO.5ug.mLKCNvsDMSO.6h.A 4107:::X0.1ug.mL.RifpvsEtOH..6hA 4107:::X0.2ug.mL..111891.DMSO..5.5h..1 4107:::X0.2ug.mL..111891.DMSO..5.5h..2 4107:::X0.2ug.mL..111891.DMSO..5.5h..3 4107:::X0.5ug.mL..111895vsDMSO.6h 4107:::X1.2mg.mL.NamvspH5.6..10.5h. 4107:::X1.2mg.mL.PZA.pH5.6..2h.. 4107:::X100uM.DipyridylvsCtrl..6hA 4107:::X10ug.mL..59.DMSO..6h 4107:::X10ug.mL.capreomycinvsEtOH..6h 4107:::X10ug.mL.ChlorprovsEtOH 4107:::X10ug.mL.ChlorprovsEtOH..6h 4107:::X10ug.mL.EconazolevsEtOH..6h 4107:::X10ug.mL.LevovsEtOH..6h 4107:::X10ug.mL.TetvsEtOH..6h 4107:::X12ug.mLEthionamidevsEtOH.6hA 4107:::X150uM.Deferroxaminevsctrl..6hA 4107:::X1ug.mL..121940.DMSO..12h 4107:::X1ug.mL..59vsDMSO..6hA 4107:::X1uM.ValinomycinvsDMSO..6h.A 4107:::X20ug.mL.Prcp.6778.DMSO..6h..2 4107:::X24ug.mL.cltrmazole.DMS..6h..1 4107:::X24ug.mL.cltrmazole.DMS..6h..2 4107:::X24ug.mL.Econazole.DMSO..6h..1 4107:::X24ug.mL.Econazole.DMSO..6h..2 4107:::X2ug.mL..121940vsDMSO..6hA 4107:::X4d.Dubos.NRP.1vsDubos.aero.A 4107:::X4ug.mLNaturalcompoundvsDMSO.6h 4107:::X50ug.mLAntimycinAvsDMSO..6hB 4107:::X50uM.NigericinvsDMSO..6h.A 4107:::X5ug.mL.AmivsEtOH..6hA 4107:::X5ug.mL.CapvsEtOH..6h 4107:::X5ug.mLProcept.6778vsDMSO.6h 4107:::X5ug.mLStreptomycinvsEtOH.6hA 4107:::X60ug.mL.ChlorprovsEtOH..6h 4364:::H37dosR.mutant.hypoxia.4hr.rep.1 4364:::H37dosR.mutant.hypoxia.4hr.rep.4 4365:::H37Rv.diamide.1h.rep.6 4396:::H37Rv.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.2 4396:::H37Rv.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.2 4396:::Strain.27.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.2 4396:::Strain.32.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.1 4396:::Strain.32.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.2 4396:::Strain.49.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.2 4489:::MTB1254.WT.vs.Rv3662c.3665c.KO.in.7H9OADC..OD.1.0.3 4489:::MTB1254.WT.vs.Rv3662c.3665c.KO.in.7H9OADC..OD.1.0.4 4489:::MTB1254.WT.vs.Rv3662c.3665c.KO.in.7H9OADC..OD.1.5.4 4489:::MTB1254.WT.vs.Rv3662c.3665c.KO.in.7H9OADC.Exp2..OD.0.3.1 4489:::MTB1254.WT.vs.Rv3662c.3665c.KO.in.7H9OADC.Exp2..OD1.5.1 4489:::MTB1254.WT.vs.Rv3662c.3665c.KO.in.7H9OADC.Exp2..OD1.5.2 4489:::MTB1254.WT.vs.Rv3662c.3665c.KO.in.7H9OADC.Exp2..OD1.5.4 4523:::H37Rv.sigB.null.mutant.control.vs.0.05..SDS.for.60.min.rep.1 4523:::H37Rv.sigB.null.mutant.control.vs.0.05..SDS.for.60.min.rep.2 4523:::H37Rv.sigB.null.mutant.control.vs.0.05..SDS.for.60.min.rep.6 4523:::H37Rv.sigB.null.mutant.control.vs.5mM.Diamide.for.60.min.rep.4 4523:::H37Rv.wild.type.control.vs.0.05..SDS.for.60.min.rep.2 4523:::H37Rv.wild.type.control.vs.0.05..SDS.for.60.min.rep.3 4523:::H37Rv.wild.type.vs.H37Rv.sigB.null.mutant.rep.2 4523:::H37Rv.wild.type.vs.H37Rv.sigB.null.mutant.rep.6 4523:::H37Rv.wild.type.Vs.H37Rv.wild.type.rep.4 4570:::MTB.strain.TB294.Ctrl.vs.SigA.overexpression.rep1 4581:::H37Rv.Ctrl.vs.2.ug.ml.garlic.extract.6hrs.rep.1 4583:::X0.2ug.ml.Isoniazid.vs.Ethanol.6hrs.rep.1 4583:::X0.2ug.ml.Isoniazid.vs.Ethanol.6hrs.rep.2 4583:::X40ug.ml.Ethionamide.vs.Ethanol.6hrs.rep.1 4599:::H37Rv.wild.type.vs.sigE.mutant.in.7H9.media..DS..rep.3 4615:::AA_10uM_10.min_01 4615:::AA_10uM_10min_01 4615:::AA_30uM_1h_04 4615:::AA_3uM_2h_T0_01 4615:::AA_60uM_2h_T0_03 4615:::aceatate.induction.1 4615:::Acetate.3mM.10m_04 4615:::CK.OA.Na.24h.1 4615:::ETYA_3uM.AA_1h_02 4615:::L2A_30uM_1h_05 4615:::L2A_30uM_30Min_06 4615:::LAA_50uM_10min_01 4615:::MTB1254_Bottom_10D_03 4615:::MTB1254_FA5_10min_04 4615:::MTB1254_Pellicle_21D_01 4615:::MTB1254.0485.1._OA_30m_01 4615:::MTB1254.0485.1._OA_30m_02 4615:::MTB1254.0485.1._PA_30m_03 4615:::MTB1254.1683._01 4615:::MTB1254.3219.1._01 4615:::MTB1254.3219.2._01 4615:::MTB1254.3219.3._01 4615:::MTB1254.3524.1._OA_10min_01 4615:::MTB1254.Rv0465c.4._PA50.OA30_30m_01 4615:::MTB1254.whiB4_SDS_90MIN_01 4615:::MTB1254vsMTB1254.0494.4. 4615:::MTB1254whiB4_SDS_90MIN_02 4615:::MTB1254whiB4_SDS_90MIN_03 4615:::MTB1254whiB4_SDS_90MIN_04 4615:::OA_50uM_10min_06 4615:::OA_50uM_1h_10 4615:::OA_50uM_4h_04 4615:::PA_10uM_10min_02 4615:::PA_50uM_10min_07 4615:::PA_50uM_1h_05 4615:::PA_50uM_24h_04 4615:::PA_50uM_24h_T0 4615:::PA_50uM_30.min_04 4615:::PA_50uM_3d_06 4615:::PA_50uM_4h_03 4615:::PA_50uM.AA_30uM_2h_01 4615:::PA_50uM.AA_30uM_2h_04 4615:::PA_50uM.OA_30uM_24h_02 4615:::PA_50uM.OA_30uM_30min_04 4615:::PA_5uM_10.min_01 4615:::Rv_OA30_30mim_01 4615:::Rv.3524.1._01 4615:::Rv.3524.2._01 4615:::Rv.MT90_100903_01 4615:::Spe_100uM_30M_01 4615:::Starvation_1254_5d_03 4615:::Starvation_1254_OA50_3d_01 4615:::Starvation_1254_PA50.OA30_6h_01 4615:::Starvation_OA50_24h_01 4615:::Starvation_OA50_6h_01 4615:::Starvation_T0 4615:::Test.4 4615:::Test.G.OA 4615:::WT_85.1_OA_10min_01 4615:::WT_WhiB4_PA_10min_01 4615:::X2.2..Dipyridyl_1mM.Dpd.AA_50uM_01 4615:::X7H9_PA_300uM_4h_T0_01 4615:::X7H9MTB1254.0465.4._SDS_90MIN_01 4696:::H37Rv.wt.vs.dosS.dosT.null.dosT.complemented.rapid.anaerobic.dormancy.day.6.rep.2 4696:::H37Rv.wt.vs.dosS.null.nitric.oxide.treatment.1hr.rep.4 4699:::CDC1551.Ctrl.vs.clinical.isolate.4130.02_Haarlem.rep.1 4729:::H37Rv.wild.type.vs.PepD.null.mutant.rep.3 4731:::X10ug.ml.capreomycin.vs.Ethanol..6hrs 4731:::X12ug.ml.Ethionamide.vs.Ethanol.6hrs.rep.1 4795:::CDC1551.ctrl.vs.10.ug.ml.Thioridazine.1hr.rep.1 4795:::CDC1551.ctrl.vs.10.ug.ml.Thioridazine.6hr.rep.2 4795:::CDC1551.ctrl.vs.40.ug.ml.Thioridazine.6hr.rep.1 4799:::H37Rv.ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.1 4799:::H37Rv.ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.2 4799:::H37Rv.mouse.hallow.fiber..ctrl.vs.25mg.kg.Isoniazid.3rd.dose.6hrs.rep.1 4799:::H37Rv.nutrient.starved..ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.2 4799:::H37Rv.O2.depleted..ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.2 4802:::H37Rv.ctrl.vs.relE2.overexpression.72.hr.rep.4 4802:::H37Rv.ctrl.vs.relE3.overexpression.72.hr.rep.2 4860:::CDC1551.nadABC.null.nicotinamide.starvation.rep.1 Maciag_JBacteriol2007:::H37Rv.wild.type.vs.H37Rv.FurB.null.rep.3 Milano_Tuberculosis2009:::H37Rv.wild.type.vs.H37Rv.Bif1.mutant.rep.3 Provvedi_Microbiology2009:::H37Rv.Control.vs.400.ug.ml.vancomycin.for.4.hrs.rep.2 Provvedi_Microbiology2009:::H37Rv.Control.vs.subinhibitory.conc..5.ug.ml..vancomycin.DS.rep.2 Rohde_CellHostMicrobe2007:::CDC1551.ctrl.vs.pH.6.5.7H9.broth.for.2.hr Schnappinger_JEM2003:::MTB.in.NOS2.null.macrophages...IFNg.for.24hrs
RV0883C -1.74018615944962 0.418184270875489 -1.55132874679617 -1.49736948603804 -1.17361392148928 -1.17361392148928 2.25279913665183 0.229326858222042 -0.148387967084851 1.14663429111021 -0.139549812305503 -0.604715853323844 0.0930332082036684 NA 0.0930332082036684 0.749434177196217 -0.468013996371515 -0.72955122963795 -1.14250475584811 -1.2113303435498 0.289067468347112 -0.578134936694224 1.55545828205827 0.922262875202691 0.536839584073208 0 -0.137651175403387 -0.688255877016934 0 1.08956199607758 2.2828918013054 2.10129813529247 1.478691280391 2.77578889476906 -0.985794186927331 -1.29709761437807 -0.544780998038788 -1.6084010418288 -2.77578889476906 -1.03767809150245 0.0259419522875614 0.311303427450736 -0.18159366601293 -0.363187332025859 -0.129709761437807 2.85361475163175 0.596664902613911 -0.0259419522875614 2.23100789673028 0 3.13897622679492 0.259419522875614 -0.285361475163175 1.37492347124075 -1.21927175751538 -0.1 0.283592705689023 -0.191616693033124 NA NA -1.57125688287161 0.360239382902272 -0.0383233386066248 0.804790110739119 -0.0996406803772244 -0.00899321012635461 0.11691173164261 -0.152884572148028 0.0629524708844822 -0.242816673411574 1.71770313413373 0.78240928099285 1.28602904806871 0.386708035433248 0.404694455685957 0.00899321012635461 0.0809388911371914 0.0809388911371914 0.242816673411574 0.656504339223886 -0.512612977202212 -0.206843832906156 0.78240928099285 -0.152884572148028 -1.10616484554162 0.11691173164261 1.16012410629974 1.32200188857413 0.548585817707631 -0.440667296191376 0.368721615180539 -0.00899321012635461 -0.152884572148028 -0.674490759476595 0.638517918971177 -1.64575745312289 -1.10616484554162 -1.21408336705787 0.0629524708844822 2.79688834929628 0.314762354422411 0.206843832906156 -0.368721615180539 0.548585817707631 -0.314762354422411 1.42992041009038 -0.764422860740141 -1.16012410629974 -1.0701920050362 -1.41193398983767 -1.96951301767166 0.170870992400737 -0.260803093664284 -1.10616484554162 0.278789513916993 1.96951301767166 2.77890192904357 0.278789513916993 -0.458653716444085 0.044966050631773 0 -0.586513703892692 1.03421916453078 0.449660506317731 0.174867974679117 -0.349735949358234 0.299773670878487 -0.849358734155712 -1.07418898731458 0.635948430363647 0.520321443024802 -0.713033088589544 0.0963558227823707 -1.40679501262261 -1.6380489873003 -0.635948430363647 -1.94171582273565 -0.306586708852998 -0.633612531629529 0.367904050623597 -1.49205531641792 -2.30961987335925 0.776686329094261 0.817564556941328 1.12415126579433 -0.9 -0.360414909643982 1.08505035220148 0.772243043458711 1.30010537696213 0.0518839045751228 0.674490759476595 0.698579715172188 -0.144533734173556 -0.578134936694224 2.09573914551656 -1.10809196199726 0.457690158216261 0.794935537954559 NA 0.457690158216261 -0.313156424042705 0.26497851265152 -0.409512246825076 0.9876471835193 -0.385423291129483 0.674490759476595 0.337245379738298 -0.0963558227823707 -4.33601202520668 0.819024493650151 0.144533734173556 0.794935537954559 1.18035882908404 -0.0481779113911853 -1.51760420882234 1.58987107590912 -1.61396003160471 -2.60160721512401 -2.36071765816808 0.481779113911854 NA -0.289067468347112 1.08400300630167 0.915380316432522 -2.04756123412538 2.21618392399453 1.6380489873003 -1.18035882908404 0.385423291129483 0.0722668670867781 -0.891291360736929 -0.819024493650151 0.505868069607446 -0.0240889556955926 0.746757626563373 -1.58987107590912 0.36133433543389 1.18035882908404 4.91414696190091 1.25262569617082 -1.46942629743115 -1.10809196199726 -0.36133433543389 0.337245379738298 -0.794935537954559 -1.99938332273419 1.27671465186641 0.602223892389817 0.770846582258966 0.36133433543389 -0.313156424042705 -2.40889556955927 -1.56578212021352 -0.119378895482583 -0.752087041540274 -0.876837987319574 -0.674490759476595 0.652007734160709 -0.157381177211206 NA 0.590179414542021 -1.43329286388776 0.461493677536618 -0.85198832775991 2.27196887402643 -0.354995136566629 NA -0.337245379738297 1.21011577435507 0 NA 0.50281302 0.0124321939844593 -0.324819341427868 -0.455350736385906 -0.5
RV2718C 0 -0.463712397140159 -0.0421556724672872 -0.379401052205585 -0.885269121813031 -0.716646431943882 0.885269121813031 1.3068258464859 0.421556724672872 1.26467017401862 -0.632335087009308 -0.927424794280319 0.505868069607447 NA 2.19209496829893 0.0887487841416573 -0.152714888938097 0.53450211128334 -0.839931889159534 -1.45079144491192 -0.0509049629793656 2.44343822300955 1.52714888938097 1.75622122278812 -0.687217000221437 0.53450211128334 NA -1.19626663001509 -0.214610696197098 0.993986382386561 2.02347227842979 1.73947616917648 1.9169737374598 1.52647908723651 -0.603491732163269 -0.780989300446584 -0.177497568283315 -0.461493677536618 -1.63297762820649 -0.816488814103247 -0.745489786789921 -0.958486868729898 -0.461493677536618 0.567992218506606 -1.2424829779832 1.98797276477312 -0.177497568283315 0.532492704849943 0.958486868729898 0.780989300446584 1.2424829779832 -0.816488814103247 0.496993191193281 1.10048492335655 -0.887487841416573 NA -0.578134936694224 NA NA NA 0.144533734173556 0.674490759476595 1.01173613921489 1.300803607562 0 0.404694455685957 1.07918521516255 0.168622689869149 -1.51760420882234 -2.66423849993255 0.438418993659787 0.876837987319574 -0.337245379738298 0.438418993659787 0.505868069607446 -2.22581950627276 -1.34898151895319 -1.21408336705787 0.438418993659787 -0.505868069607446 NA 0.539592607581276 0.202347227842979 0.741939835424255 -0.303520841764468 -0.843113449345744 -0.303520841764468 -0.674490759476595 -0.472143531633617 -0.101173613921489 0.202347227842979 -0.843113449345744 0.978011601241063 -1.31525698097936 1.28153244300553 -0.505868069607446 -0.202347227842979 0 0.337245379738298 3.06893295561851 -0.236071765816808 0.438418993659787 -1.65250236071766 -0.168622689869149 -0.640766221502765 0.775664373398084 -1.14663429111021 -1.18035882908404 -1.01173613921489 -1.38270605692702 -1.31525698097936 -2.52934034803723 -1.21408336705787 -1.38270605692702 -1.04546067718872 1.71995143666532 0.438418993659787 -0.0337245379738298 -0.0337245379738298 -2.22581950627276 1.04239481010019 -0.531416962011863 0.65 NA NA NA NA NA NA 0.275 0.275 -0.375 0.525 NA 0.375 0.025 -1.76117031641111 -1.34898151895319 0.187358544299054 0.149886835439243 0.149886835439243 -0.187358544299054 NA 0.412188797457919 0.974264430355082 -1.07700943851908 -1.00654774875738 0.275 0.225 -0.175 0.390494650223292 0.44966050631773 0.0963558227823707 0.289067468347112 -0.289067468347112 NA -0.0321186075941236 0.674490759476595 0.256948860752989 0.738727974664842 -0.289067468347112 1.25262569617082 0.160593037970618 -1.05991405060608 0.353304683535359 -1.57381177211206 -0.128474430376494 -0.513897721505977 -1.50957455692381 -5.0426213922774 1.60593037970618 1.6380489873003 1.25262569617082 0.160593037970618 0.0642372151882471 0.0642372151882471 0.674490759476595 -1.73440481008267 -1.28474430376494 -1.34898151895319 1.34898151895319 1.28474430376494 -0.289067468347112 0.192711645564741 0.89932101263546 NA NA 0.44966050631773 NA 0.417541898723607 0.321186075941236 -0.835083797447213 0 0.0642372151882471 -0.256948860752989 0.706609367070719 -1.70228620248855 1.7665234176768 2.08770949361803 4.36813063280081 0.481779113911854 NA -1.34898151895319 -0.578134936694224 0.80296518985309 0.192711645564741 -1.54169316451793 0.546016329100101 NA 0.867202405041337 0.289067468347112 0.931439620229584 -0.770846582258966 -0.578134936694224 -0.845789999978588 0.107062025313745 -0.224830253158865 -0.674490759476595 NA 1.375 NA 2.4956158100634 -1.48387967084851 NA NA NA NA NA -0.0510977848088329 1.29788373414436 NA 0.738313075249738 0.6058448175 -0.8725511675 NA NA 0
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RV2747 NA NA NA NA NA NA NA NA NA NA -1.38386897202957 NA NA NA 1.31409406587681 0.1 -0.512612977202212 -0.0269796303790638 -1.13314447592068 -1.51085930122757 0 0.458653716444085 0.998246324025361 1.45690004046945 -0.458653716444085 1.268042627816 0.458653716444085 -1.13314447592068 -1.3 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 0.847931240484863 NA NA NA NA NA NA NA NA NA 0.285361475163175 1.73811080326661 -0.155651713725368 -1.73811080326661 -1.9456464215671 -0.129709761437807 1.1414459006527 0.57072295032635 0.907968330064647 1.1414459006527 -1.63434299411637 -0.18159366601293 -0.0778258568626841 0.57072295032635 0.700432711764157 NA 0.648548807189034 0.415071236600982 0.233477570588052 -1.76405275555417 NA 0.622606854901472 0.882026377777086 -0.259419522875614 NA 1.32303956666563 -0.830142473201963 0.648548807189034 -3.11303427450736 0.155651713725368 NA 0.363187332025859 -0.596664902613911 -0.129709761437807 0.441013188888543 -0.207535618300491 0.155651713725368 -1.06362004379002 1.63434299411637 -0.259419522875614 0.207535618300491 -0.596664902613911 -1.73811080326661 -1.40086542352831 -1.97158837385466 -0.0259419522875614 NA 0.18159366601293 0.0259419522875614 -0.752316616339279 0.778258568626841 1.08956199607758 NA 0 NA 0.529957025303039 -0.0602223892389817 0.3 1.35 0 -0.549999999999999 0.9 -0.549999999999999 -0.549999999999999 1.07305348098549 0.521197405050096 NA -0.970857911367827 NA -1.07305348098549 -0.112415126579433 NA NA NA NA NA NA NA NA NA NA 0 0.385423291129483 0.353304683535359 0.642372151882472 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA -1.50768522706533 -0.542237669383145 -1.87563868731163 0.2 0.108788832173644 0.239335430782018 NA -0.533971851252304 -0.674490759476595 NA NA NA NA NA -1.12415126579433 0.0518839045751227 NA 1.08218737602134 0.674490759476595 NA NA 3.95068375102481 0
RV3604C 0.0613173417705996 -0.502802202518916 -0.968813999975473 -0.649963822768355 0.0367904050623597 -1.43482579743203 0.919760126558993 -0.0858442784788394 -0.0613173417705996 0.134898151895319 0.269796303790638 -1.02522595440442 0.431674086065021 0.701470389855659 0.674490759476595 0 -0.674490759476595 -0.786905886056028 -2.21083082272884 -0.936792721495271 -1.0492078480747 1.23656639237376 2.13588740500922 1.87358544299054 -0.711962468336406 0.524603924037352 1.08667955693451 -2.81037816448581 -0.35 0.505868069607446 2.3185619857008 1.43329286388776 1.05389181168218 3.11951976257925 -0.168622689869149 -1.26467017401862 0.29508970727101 -0.463712397140159 -0.548023742074733 -1.13820315661675 -1.01173613921489 -1.85484958856064 -0.758802104411169 -1.01173613921489 -0.885269121813031 2.48718467556994 0.548023742074734 -0.379401052205585 2.74011871037367 0.632335087009308 1.85484958856064 0 -0.29508970727101 1.13820315661675 0.0843113449345745 NA -0.726374664051718 -0.380481966884233 -1.10685663093595 -3.11303427450736 -0.44966050631773 0.242124888017239 0.864731742918711 0.484249776034478 0.345892697167485 0.357893056048806 -0.660725641936256 0.110120940322709 -1.95464669072809 -1.43157222419522 0.825907052420321 0.798376817339643 0.93602799274303 -0.0550604701613547 -0.275302350806774 -1.2113303435498 -0.0550604701613547 -0.357893056048806 1.37651175403387 0.605665171774902 -0.247772115726096 0.0550604701613547 0.385423291129483 0.357893056048806 -0.52307446653287 -2.69796303790638 1.12873963830777 1.10120940322709 0.991088462904385 -1.29392104879184 0.605665171774902 0.165181410484064 0.357893056048806 -1.706874575002 0.192711645564742 -0.330362820968128 -0.633195406855579 -0.605665171774902 0.165181410484064 0.825907052420321 0.770846582258966 0.495544231452192 NA 0.495544231452192 -0.825907052420321 0.385423291129483 -0.192711645564742 -0.137651175403387 -1.23886057863048 -1.78946528024403 -0.468013996371515 -1.43157222419522 -0.880967522581675 -0.633195406855579 -0.578134936694225 0.743316347178289 0.247772115726096 0.0550604701613547 -0.0275302350806774 -2.25747927661554 0.981979193943867 -1.34898151895319 1 1.01923048098685 0 NA 0.68947944302052 -1.1691173164261 -1.25904941768964 1.18035882908404 1.13820315661675 -0.716646431943883 -0.611257250775665 -0.505868069607447 -0.632335087009308 0.105389181168218 -2.25254461183693 -2.76159424163059 0.0381787222345243 0.470870907559133 -0.674490759476595 -0.190893611172621 1.05627798182184 1.20899287075994 0.292703537131353 -0.1 -0.402681050433788 1.56359221515029 1.07305348098549 -0.183952025311799 0.918455502266002 0.860557175883932 0.488424343069259 NA NA NA -0.465166041018342 1.41875642510594 0.627974155374761 0.116291510254585 0.16280811435642 0.0930332082036683 0.0232583020509171 -0.511682645120176 0.186066416407337 -1.39549812305502 1.7676309558697 -1.23269000869861 -0.488424343069258 NA 0.721007363578429 -0.0232583020509171 -0.0465166041018342 0 -0.674490759476595 -0.9535903840876 0.255841322560088 -0.488424343069258 -1.32572321690227 -1.69785604971695 -0.0697749061527513 0.860557175883932 -0.209324718458254 0.651232457425678 1.20943170664769 -1.46527302920778 NA 1.16291510254585 -1.67459774766603 1.37223982100411 0.0232583020509171 -1.04662359229127 -1.0931401963931 -0.0232583020509171 -0.348874530763756 0.627974155374761 NA 0.674490759476595 1.86066416407337 3.55852021379031 1.27920661280044 -3.09335417277197 -1.93043907022612 -1.48853133125869 0.721007363578429 -1.39549812305502 0.348874530763756 1.18617340459677 2.20953869483712 NA 0.55819924922201 1.16291510254585 -0.651232457425678 -1.79088925792061 0.0470574948472043 -0.32940246393043 -1.17232917718551 NA -0.493529824007265 0.855451694945926 -1.06343068647405 1.09297042776499 -0.20677818903662 0.639901489759847 -0.89932101263546 0.709080029193344 -1.02038345664408 NA -1.7325154802242 1.38865744598123 0 0 NA NA 1.16913143022554 2.671947595669 0
RV3850 -1.00262139922197 -0.60157283953318 -1.22137515905221 -1.11199827913709 -0.528654919589764 0.382819079702932 0.164065319872685 1.03908035919367 -0.41927803967464 -0.674490759476595 -0.0578134936694225 -0.674490759476595 0.404694455685957 NA -0.0192711645564742 -0.314762354422411 -0.854354962003687 0.134898151895319 -0.134898151895319 -2.24830253158865 -0.44966050631773 0.224830253158865 0.44966050631773 -0.314762354422411 -0.764422860740141 -0.269796303790638 0.404694455685957 -3.68721615180539 -0.155651713725368 1.05670218984667 0.854354962003687 2.24830253158865 2.18085345564099 2.51809883537929 -0.989253113899006 -1.55132874679617 -0.292279329106525 -0.719456810108368 -1.1691173164261 -0.224830253158865 0 -1.82112505058681 0 -0.89932101263546 1.07918521516255 2.3382346328522 0.337245379738298 0.44966050631773 1.01173613921489 0.427177481001844 1.68622689869149 0 0.786905886056028 1.30401546832142 -0.359728405054184 NA NA -1.43891362021674 -2.69796303790638 NA -1.77615899995503 0.112415126579433 0.786905886056028 -0.292279329106525 0.089932101263546 1.45274932810344 1.21927175751538 0.518839045751227 -0.311303427450736 -1.91970446927954 0.882026377777086 0.285361475163175 -0.0259419522875613 1.37492347124075 -0.492897093463666 -1.03767809150245 -0.518839045751227 0.103767809150245 0.285361475163175 0.129709761437807 -0.57072295032635 0.700432711764157 0.674490759476595 0.441013188888543 -3.03520841764468 0.778258568626841 0.441013188888543 0.38912928431342 0.726374664051718 0.0778258568626841 1.55651713725368 -0.804200520914402 NA -2.04941423071735 0.259419522875614 -0.674490759476595 -0.804200520914402 -1.1414459006527 0.0518839045751227 2.07535618300491 0.285361475163175 0.311303427450736 -0.674490759476595 0.207535618300491 -2.15318203986759 -0.233477570588052 -1.01173613921489 -0.596664902613911 -1.19332980522782 -1.21927175751538 -1.42680737581587 -2.36071765816808 -0.726374664051718 -0.103767809150245 -0.726374664051718 0.648548807189034 2.30883375359296 0.57072295032635 0.0259419522875613 -2.02347227842979 1.89586591852881 0.364589599717079 NA NA NA NA NA NA NA 0.824377594915839 0.711962468336406 -0.936792721495271 -1.12415126579433 -2.21083082272884 0.112415126579433 0.337245379738298 -1.55921240502382 -1.20882759490611 -0.297827088600055 0.350384810117712 -1.64680860755325 -1.20882759490611 0.805885063270737 0.262788607588284 0.823404303776623 -1.22509546109014 0.343161965347742 0.181206472695205 0.241608630260273 0.322144840347031 0.596061601397921 0.485633346823149 0.512612977202212 0.485633346823149 -0.998246324025361 1.99649264805072 -1.96951301767166 0.890327802509106 0.215837043032511 0.323755564548766 0.647511129097532 0.188857412653447 0.269796303790638 -0.485633346823149 0.0539592607581276 -1.37596114933225 0.0269796303790638 -0.458653716444085 -0.377714825306893 -2.29326858222042 1.21408336705787 0.944287063267233 0.512612977202212 0.323755564548766 0 -0.998246324025361 0.431674086065021 -1.37596114933225 -2.48212599487387 -2.64400377714825 1.42992041009038 0.863348172130042 0.0809388911371914 1.59179819236477 0.296775934169702 -1.69971671388102 0.377714825306893 0.647511129097532 -1.07918521516255 0.647511129097532 0.998246324025361 -0.944287063267234 -0.998246324025361 0.404694455685957 -1.05220558478349 1.05220558478349 -2.80588155942264 0.728450020234723 0.161877782274383 3.15661675435047 2.50910562525293 -2.88682045055983 -2.69796303790638 -3.21057601510859 0.215837043032511 -0.296775934169702 -2.05045190880885 0.485633346823149 2.15837043032511 0.323755564548766 0.377714825306893 -0.134898151895319 -1.05220558478349 -1.88857412653447 0.815520645548974 -0.410826189863017 0.674490759476595 0 -0.0642372151882472 0.44966050631773 -0.728646951843329 0.620334567109861 -1.02404436475279 0.208997136739227 -0.797989067549775 2.33696798353863 -0.550992451403416 NA 0 1.42833337300926 0.580062053149872 NA 0 -0.849965335460242 0.852931257364617 NA 0
[+] Show/hide bicluster #310 motif PSSM #1. bicluster 310 motif PSSM #1 Mycobacterium tuberculosis H37Rv 13x4
POSITION A C G T
1 0 0 0.571429 0.428571
2 0 0 0 1
3 0 0 1 0
4 0 0.428571 0 0.571429
5 0 1 0 0
6 0.428571 0 0.428571 0.142857
7 0.857143 0 0 0.142857
8 0.285714 0.714286 0 0
9 0 0.428571 0.571429 0
10 0.571429 0.142857 0 0.285714
11 0 0.285714 0.571429 0.142857
12 0.142857 0 0.857143 0
13 0 1 0 0 [+] Show/hide bicluster #310 motif PSSM #2. bicluster 310 motif PSSM #2 Mycobacterium tuberculosis H37Rv 10x4
POSITION A C G T
1 0 0 1 0
2 0 1 0 0
3 0 0 1 0
4 0.8 0 0 0.2
5 0.2 0 0 0.8
6 0.2 0.2 0 0.6
7 0.8 0.2 0 0
8 0 1 0 0
9 0 1 0 0
10 0 0 1 0 |