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[+] Show/hide bicluster #313 rows and columns.
bicluster 313
Mycobacterium tuberculosis H37Rv
15x241
[+] Show/hide bicluster #313 rows (genes).
bicluster 313 genes
Mycobacterium tuberculosis H37Rv
15
[+] Show/hide bicluster #313 rows (short gene names).
bicluster 313 short names
Mycobacterium tuberculosis H37Rv
15
short_name
[+] Show/hide bicluster #313 rows (long gene names).
bicluster 313 long names
Mycobacterium tuberculosis H37Rv
15
long_name
[+] Show/hide bicluster #313 rows (NCBI RefSeq gene IDs).
bicluster 313 NCBI RefSeq IDs
Mycobacterium tuberculosis H37Rv
30
[+] Show/hide bicluster #313 gene upstream sequences.
bicluster 313 upstream sequences
Mycobacterium tuberculosis H37Rv
15
upstream
[+] Show/hide bicluster #313 columns (arrays; conditions).
bicluster 313 arrays
Mycobacterium tuberculosis H37Rv
241
[+] Show/hide bicluster #313 ratios.
bicluster 313 ratios
Mycobacterium tuberculosis H37Rv
15x241
GENES 2867:::H37Ra..Youman.media.replicate.4 2885:::Strain.1006...replicate.2 2885:::Strain.1843..replicate.1 2885:::Strain.3160..replicate.2 2885:::Strain.9700665..replicate.3 4055:::H37Rv.Vs.M.bovis.rep1 4060:::H37Rv.0.05..SDS.exposure.for.1h.rep.6 4060:::H37Rv.sigE.null.0.05..SDS.exposure.for.1h.rep.1 4062:::H37.Rv3132.34.KO.0.days.vs.Rv3132.34.KO..complemented..hypoxia.4.day.rep.1 4062:::H37Rv.0.day.ctrl.vs.Rv3132.34.KO.hypoxia.4.day.rep.2 4062:::H37Rv.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.1 4062:::MTB.strain.1254.Ctrl.vs.2hr.Hypoxia.rep.2 4062:::MTB.strain.1254.Ctrl.vs.high.aeration.rep1 4062:::MTB1254.Day.0.vs.low.Oxygen.Day.4.rep.2 4068:::H37Rv.delta.mprAB.mutant.vs..H37Rv.delta.mprAB.mutant.SDS.treated.rep.6 4068:::H37Rv.SDS.treated.vs..H37Rv.delta.mprAB.mutant.SDS.treated.rep.1 4068:::H37Rv.vs..H37Rv.delta.mprAB.mutant.rep.1 4068:::H37Rv.vs..H37Rv.delta.mprAB.mutant.rep.3 4068:::H37Rv.vs..H37Rv.delta.mprAB.mutant.rep.5 4068:::H37Rv.vs..H37Rv.SDS.treated.rep.5 4082:::H37Rv.wild.type.Vs.Rv3676.null.1 4082:::H37Rv.wild.type.Vs.Rv3676.null.6 4082:::Rv3676.null.Vs.H37Rv.wild.type.1 4082:::Rv3676.null.Vs.H37Rv.wild.type.6 4084:::High.iron.wt.vs.low.iron.wt.2b 4089:::H37Rv.whiB7.null.ethanol.vs..1.0.ug.ml.Tetracyclin.for.15.min.rep.4 4089:::MTB1254.control.vs..100.ug.ml.Streptomycin.for.15.min.rep.3 4089:::MTB1254.ethanol.vs..25.ug.ml.Erythromycin.for.15.min.rep.4 4101:::H37Rv.Day24.3 4107:::DIPED.5ug.mL.vs.DMSO.12h.2 4107:::Mtm.0.2ug.mL.vs.ctrl.8h.1 4107:::Mtm.0.2ug.mL.vs.ctrl.8h.2 4107:::Palmitate.Glucose..2 4107:::PBS.Tw.DMSOvs7H9..6h 4107:::pH4.8vspH6.8..11h. 4107:::pH5.2vspH6.8..11h. 4107:::pH5.6vspH6.8..11h. 4107:::pH5.6vspH6.8..16h. 4107:::pH5.6vspH6.8..4h.B 4107:::pH5.6vspH6.8..7h. 4107:::X0.12mg.mL.PZA.pH5.6..4h..2 4107:::X0.13mg.mL.TLMvsDMSO..6hA 4107:::X0.1ug.mL.Mtmvsctrl..0.33h. 4107:::X0.1ug.mL.Mtmvsctrl..0.75h. 4107:::X0.1ug.mL.Mtmvsctrl..1.5h. 4107:::X0.2mg.mL.TLMvsEtOH..6h 4107:::X0.2mg.mL.TLMvsEtOH..6hA 4107:::X0.2ug.mL.Mtmvsctrl..0.33h. 4107:::X0.2ug.mL.Mtmvsctrl..2h.A 4107:::X0.32ug.mL.CervsEtOH..6hA 4107:::X0.5ug.mL..121940vsDMSO.6hA 4107:::X0.5ug.mL.CervsEtOH..6h 4107:::X10mM.Succinate.10mM.Gluc..1 4107:::X10ug.mL.CapvsEtOH..6h 4107:::X10ug.mL.EconazolevsEtOH..6hA 4107:::X10ug.mL.EMBvsDMSO..6hA 4107:::X10ug.mL.Nvb.DMSO..6h..1 4107:::X10ug.mL.Nvb.DMSO..6h..2 4107:::X10ug.mL.OfloxvsDMSO..6h 4107:::X10ug.mL.OfloxvsDMSO..6hA 4107:::X10ug.mL.PA.21vsDMSO..6h 4107:::X10ug.mL.TriclosanvsDMSO..6hC 4107:::X10uM.CCCP.DMSO..6h 4107:::X10uM.ValinomycinvsDMSO..6h 4107:::X12ug.mLEthionamidevsEtOH.6h 4107:::X12ug.mLEthionamidevsEtOH.6hA 4107:::X1ug.mL..241vsDMSO..6h 4107:::X1uM.ValinomycinvsDMSO..6h 4107:::X1uM.ValinomycinvsDMSO..6h.B 4107:::X20ug.mL.Cephalexin.Ctrl..6h..1 4107:::X20ug.mL.KCN.DMSO..6h 4107:::X20uM.DCCD.DMSO..6h..1 4107:::X250uM.DeferroxaminevsDMSO..6h 4107:::X25ug.mL.CPZvsDMSO..6h.B 4107:::X25ug.mL.TRZ.DMSO..6h 4107:::X2ug.mL..111891vsDMSO..6h 4107:::X2ug.mL..111895vsDMSO..6hB 4107:::X2ug.mL..121940vsDMSO..6h 4107:::X4mM.H2O2.ctrl..4h...1 4107:::X4mM.H2O2vsctrl..1h. 4107:::X50ug.mL.Thioridazine.DMSO..6h 4107:::X50ug.mL.Triclosan.EtOH 4107:::X50ug.mLAntimycinAvsDMSO..6h 4107:::X50ug.mLAntimycinAvsDMSO..6hB 4107:::X50uM.CCCP.DMSO..6h..2 4363:::H37Rv.hypoxia.4.day.rep.4 4363:::H37Rv.hypoxia.4.day.rep.7 4364:::H37dosR.mutant.hypoxia.12hr.rep.4 4364:::H37dosR.mutant.hypoxia.8hr.rep.3 4365:::H37Rv.sigma.H.null.mutant.diamide.1h.rep.1 4365:::H37Rv.sigma.H.null.mutant.diamide.1h.rep.2 4396:::H37Rv.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.3 4396:::H37Rv.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.1 4396:::Strain.49.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.2 4489:::MTB1254.Opp.KO.complemented.vs.Opp.KO.in.7H9OADC..OD..1.0.2 4489:::MTB1254.WT.vs.Rv3662c.3665c.KO.in.7H9OADC..OD.1.0.2 4489:::MTB1254.WT.vs.Rv3662c.3665c.KO.in.7H9OADC..OD.1.0.3 4489:::MTB1254.WT.vs.Rv3662c.3665c.KO.in.7H9OADC..OD.1.0.6 4489:::MTB1254.WT.vs.Rv3662c.3665c.KO.in.7H9OADC..OD.1.5.2 4489:::MTB1254.WT.vs.Rv3662c.3665c.KO.in.7H9OADC..OD.1.5.3 4523:::H37Rv.sigB.null.mutant.control.vs.5mM.Diamide.for.60.min.rep.1 4523:::H37Rv.sigB.null.mutant.control.vs.5mM.Diamide.for.60.min.rep.3 4523:::H37Rv.wild.type.control.vs.5mM.Diamide.for.60.min.rep.4 4523:::H37Rv.wild.type.control.vs.5mM.Diamide.for.60.min.rep.5 4570:::MTB.strain.TB294.Ctrl.vs.SigA.overexpression.rep2 4570:::MTB.strain.TB294.SigA.overexpression.vs.Ctrl..DS..rep2 4575:::Purified.Human.SP.A.Uncoated.2hrs.rep4 4575:::Whole.Lung.Surfactant.2hrs.rep.2 4581:::H37Rv.Ctrl.vs.2.ug.ml.garlic.extract.6hrs.rep.1 4583:::X0.13mg.ml.TLM.vs.DMSO.6hrs.rep.1 4583:::X0.2mg.ml.TLM.vs.Ethanol.6hrs.rep.2 4583:::X0.2ug.ml.Isoniazid.vs.Ethanol.6hrs.rep.1 4583:::X20ug.ml.KCN.vs.DMSO.6hrs 4599:::H37Rv.vs.SigE.mutant.24hrs.after.macrophage.infection..DS..rep.2 4599:::H37Rv.vs.SigE.mutant.24hrs.after.macrophage.infection.rep.1 4599:::H37Rv.vs.SigE.mutant.24hrs.after.macrophage.infection.rep.3 4599:::H37Rv.wild.type.vs.sigE.mutant.in.7H9.media..DS..rep.2 4599:::H37Rv.wild.type.vs.sigE.mutant.in.7H9.media.rep.3 4599:::H37Rv.wild.type.vs.sigE.mutant.in.RPMI.media.for.2.hrs.rep.2 4599:::H37Rv.wild.type.vs.sigE.mutant.in.RPMI.media.for.2hrs..DS..rep.2 4615:::AA_30uM_10.min_04 4615:::AA_30uM_10min_02 4615:::AA_30uM_4h_06 4615:::AA_3uM_10.min_01 4615:::AA_3uM_2h_T0_01 4615:::Acetate.3mM.10m.06 4615:::Acetate.3mM.2h.02 4615:::Acetate.3mM.30m.05 4615:::Acetate.3mM.30m.06 4615:::Acetate.3mM.60m.03 4615:::CHP25uM_24h.50uMOA_30min_01 4615:::CK_OA_NA_2h.02 4615:::CK.AA0.03.2h.02 4615:::CK.PA.NA.2h.02..100901 4615:::ETYA_30uM_10min.04 4615:::ETYA_30uM_10min.05 4615:::Glycerol_1. 4615:::Glycerol_1._30M_01 4615:::L2A_30uM_1h_06 4615:::L2A_30uM_1h_08 4615:::L2A_30uM_4h_05 4615:::MDG.MD.glycerol 4615:::MTB1254_Bottom_14D_02 4615:::MTB1254_FA5_10min_03 4615:::MTB1254_Pellicle_10D_02 4615:::MTB1254_Pellicle_14D_02 4615:::MTB1254_Pellicle_14D_04 4615:::MTB1254_Pellicle_42D_02 4615:::MTB1254.0485.1._ETYA_10m_01 4615:::MTB1254.0485.1._OA_10m_04 4615:::MTB1254.0485.1._PA_10m_03 4615:::MTB1254.B4.1._PA_30MIN_01 4615:::MTB1254.Rv3524.2._PA50.OA30_30m_01 4615:::MTB1254.Rv3524.2.compl._PA50.OA30_2h_02 4615:::MTB1254TA1_OA.30min_01 4615:::MTB1370_PA50_1h_04 4615:::OA_50uM_24h_02 4615:::OA_50uM_2h.1.5..BSA_30min_01 4615:::OA_50uM_30min_02 4615:::OA_50uM_30min_07 4615:::OA_50uM_4h_04 4615:::OA_50uM_4h_06 4615:::PA_100uM_24h_T0_01 4615:::PA_50uM_10.min_03 4615:::PA_50uM_1h_10 4615:::PA_50uM_24h_03 4615:::PA_50uM_24h_07 4615:::PA_50uM_24h_09 4615:::PA_50uM_24h_10 4615:::PA_50uM_30.min_06 4615:::PA_50uM_3d_01 4615:::PA_50uM_4h_T0_01 4615:::PA_50uM_8h_03 4615:::PA_50uM.AA_30uM_2h_01 4615:::PA_50uM.AA_30uM_2h_02 4615:::PA_50uM.AA_30uM_2h_04 4615:::PA_50uM.OA_30uM_24h_01 4615:::PA_50uM.OA_30uM_30min_04 4615:::PA_50uM.OA_30uM_4h_05 4615:::Rv_OA_10min 4615:::Rv_Rv3524.1 4615:::Rv.MT96_100503_01 4615:::Rv.MT96_100703_01 4615:::Starvation_1254_OA50_3d_03 4615:::Starvation_1254_PA50_24h_01 4615:::Starvation_1254_PA50_6h_03 4615:::Starvation_OA50_6h_02 4615:::TBD041 4615:::TBD042 4615:::TBD043 4615:::TBD1113 4615:::TBD1114 4615:::TBD1116 4615:::TBD1275 4615:::TBD1277 4615:::TBD663 4615:::TBE056 4615:::TBF466 4615:::Tet_5ug_30M_01 4615:::WM_1254_10d_02 4615:::WM_1254.whiB4._10d_01 4630:::H37Rv.wild.type.Cy3.vs.Rv0485.Tn.mutant.Cy5.rep.2 4630:::H37Rv.wild.type.Cy5.vs.Rv0485.Tn.mutant.Cy3..DS..rep.2 4638:::CDC1551.wild.type.vs.kstR.null.in.1mg.ml.cholesterol.for.24.hrs.rep.2 4638:::CDC1551.wild.type.vs.kstR.null.rep.2 4638:::CDC1551.wild.type.vs.kstR.null.rep.3 4696:::H37Rv.wt.vs.dosS.dosT.null.dosT.complemented.rapid.anaerobic.dormancy.day.6.rep.2 4696:::H37Rv.wt.vs.dosS.dosT.null.rapid.anaerobic.dormancy.day.6.rep.2 4696:::H37Rv.wt.vs.dosS.null.anaerobic.Gaspak.4hr.rep.2 4696:::H37Rv.wt.vs.dosS.null.nitric.oxide.treatment.1hr.rep.1 4696:::H37Rv.wt.vs.dosT.null.nitric.oxide.treatment.1hr.rep.3 4699:::CDC1551.Ctrl.vs.clinical.isolate.10514.01_Afri2.rep.1 4699:::CDC1551.Ctrl.vs.clinical.isolate.1500.03_Beijing.rep.2 4703:::Clinical.isolate.1797.03_EAI.extra.vs.intracellular.in.resting.macrophages.rep.2 4703:::Clinical.isolate.2191.99_Uganda.extra.vs.intracellular.in.resting.macrophages.rep.1 4703:::Clinical.isolate.9532.03_Haarlem.extra.vs.intracellular.in.resting.macrophages.rep.1 4704:::Clinical.isolate.10514.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.2 4704:::Clinical.isolate.1934.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.1 4704:::Clinical.isolate.2333.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.2 4729:::H37Rv.wild.type.vs.PepD.null.mutant..DS..rep.1 4729:::H37Rv.wild.type.vs.PepD.null.mutant.rep.1 4735:::BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.2.rep.3 4735:::BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.2.rep.4 4735:::BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.4.rep.4 4735:::BCG.wild.type.vs.BCG.with.pMFdosR.at.OD.0.4.rep.4 4799:::H37Rv.mouse.hallow.fiber..ctrl.vs.25mg.kg.Isoniazid.3rd.dose.6hrs.rep.1 4799:::H37Rv.mouse.hallow.fiber..ctrl.vs.25mg.kg.Isoniazid.3rd.dose.6hrs.rep.2 4799:::H37Rv.O2.depleted..ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.1 4802:::H37Rv.ctrl.vs.relE1.overexpression.6.hr.rep.3 4802:::H37Rv.ctrl.vs.relE2.overexpression.24.hr.rep.3 4802:::H37Rv.ctrl.vs.relE3.overexpression.6.hr.rep.4 4815:::H37Rv.reaeration.for.4hrs.rep.6 4928:::Mtb.Erdman.strain.200.ppm.CO.rep.1 Maciag_JBacteriol2007:::H37Rv.wild.type.vs.H37Rv.FurB.null.rep.4 Provvedi_Microbiology2009:::H37Rv.Control.vs.400.ug.ml.vancomycin.for.1.hr.DS.rep.1 Provvedi_Microbiology2009:::H37Rv.Control.vs.400.ug.ml.vancomycin.for.4.hrs.DS.rep.1 Provvedi_Microbiology2009:::H37Rv.Control.vs.400.ug.ml.vancomycin.for.4.hrs.rep.1 Provvedi_Microbiology2009:::H37Rv.Control.vs.400.ug.ml.vancomycin.for.4.hrs.rep.2 Provvedi_Microbiology2009:::H37Rv.Control.vs.subinhibitory.conc..5.ug.ml..vancomycin.rep.1 Schnappinger_JEM2003:::MTB.in.Wild.type.macrophages...IFNg.for.48hrs Schnappinger_JEM2003:::MTB.in.Wild.type.macrophages.for.24hrs
RV0999 -2.5 -1.06613055530172 -0.326366496520933 -0.0652732993041867 0.0652732993041867 -0.25 0.0396759270280349 2.10282413248586 -0.269796303790638 -1.07918521516255 -0.0449660506317729 -0.809388911371914 0.359728405054184 -1.12415126579433 NA NA NA NA NA NA -0.505868069607446 -2.9508970727101 0.505868069607446 2.9508970727101 -0.225 1.49166225653478 0.324274403594517 -1.18035882908404 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 0.369672820097749 -1.04416357957434 -0.68947944302052 0.0449660506317731 0 0.05 NA 0.3 0.25 0.45 0.1 -0.5 -2.15 0 -1.85 0.112415126579433 0.533971851252305 0.140518908224291 -0.337245379738298 -0.989253113899006 2.02347227842978 0.342961403123692 -1.73767110916004 2.79887110428477 -0.521197405050096 -0.275928037967698 1.07305348098549 2.23808297462688 0.697354853018175 0.240072982186585 -0.0342961403123693 0.0342961403123693 -0.0342961403123693 -0.114320467707897 -0.0685922806247385 0.0963558227823708 -0.417541898723607 -1.6380489873003 0.44966050631773 -0.289067468347112 -1.89499784805329 -0.385423291129483 -0.417541898723607 -0.963558227823707 -1.18838848098257 -0.867202405041337 -0.481779113911854 0.706609367070719 0.0321186075941236 0.0642372151882472 -1.6380489873003 -1.05991405060608 -0.0321186075941236 -0.0321186075941236 -0.224830253158865 -0.995676835417831 NA 1.31686291135907 0.0321186075941236 -1.38110012654731 -1.05991405060608 -0.128474430376494 1.28474430376494 0.289067468347112 -0.353304683535359 -0.192711645564741 -0.353304683535359 -0.417541898723607 -0.0963558227823706 0.610253544288348 -1.60593037970618 -0.385423291129483 0.44966050631773 -0.89932101263546 -1.0920326582002 -1.67016759489443 -2.34465835437102 1.79864202527092 0.289067468347112 NA 1.60593037970618 -1.25262569617082 0.738727974664842 0.835083797447213 0.674490759476595 -0.128474430376494 3.9505887340772 -0.353304683535359 0.0963558227823708 0 0.321186075941236 0.835083797447213 -1.73440481008267 -0.44966050631773 -1.54169316451793 -0.128474430376494 0.642372151882472 0.546016329100101 -0.0963558227823706 1.18838848098257 -0.160593037970618 -0.738727974664842 0.674490759476595 0.706609367070719 1.60593037970618 -0.963558227823707 -0.385423291129483 0.513897721505977 0.963558227823707 1.0920326582002 -0.256948860752989 0.674490759476595 -0.642372151882471 0.385423291129483 0.289067468347112 0.417541898723607 2.24830253158865 -0.29095679820559 -0.425 0.425 0.375 -0.69135302846351 -2.22019874994379 -0.230451009487837 -0.0618283196186879 0.387832186699042 -1.03421916453078 -0.224830253158865 -0.156858316157348 -0.313716632314695 -1.19212320279584 0.893700256306489 2.00661000944287 -0.0168622689869149 -0.674490759476595 1.92711645564742 -0.8 1.35 0.7 0.75 1.39715943034438 -0.433601202520668 2.07165018982097 -1.45878234026333 0.486260780087778 -1.11369404471717 2.22786341766512 -0.1 NA -2.1422005525 -0.1866335925 0.9114739875 0.7150409875 -0.0740625175 0 -0.5
RV1053C NA NA NA NA NA -1.75 0.357083343252315 1.38865744598122 0.490538734164796 -0.797125443017794 0.275928037967698 0.153293354426499 -0.306586708852998 -0.0613173417705996 0.858442784788394 -0.582514746820696 -1.10371215187079 0.153293354426499 -0.643832088591295 -0.613173417705996 NA NA NA NA -0.562075632897163 0.89932101263546 -0.05290123603738 0.07935185405607 1.39894379743294 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA -1.03296137290472 -0.344320457634905 NA -0.580811487327068 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 0.766466772132495 -4.03927988913825 2.04292874264546 0.044966050631773 -1.1691173164261 0.404694455685957 5.03619767075858 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 1.37396265819306 -0.141559789025952 -1.11608560648818 0.559555114363992 -0.559555114363992 -1.21507526523357 -0.99685766657938 NA NA -0.0495949087850438 0.121629481217091 0.309602315825322 1.25386102723213 0.181593666012929 0.0432365871459356 -0.47611112433642 -0.347164361495306 0.267812507439236 -1.1314038546059 0 NA NA NA NA 2.21618392399453 -0.660725641936257 0.646960524395918 NA NA NA 0.536839584073209 -0.0224830253158865 0.850805695 -0.411403855 -0.30263646 1.24052791 0.40683885 0.24155053 0 0
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RV3444C NA -0.735808101247194 0.0613173417705996 0.766466772132495 -0.0613173417705996 NA 0.1 -0.8 -2.40287333063537 -1.34898151895319 0.590179414542021 0.337245379738298 -1.05389181168218 -3.962633211925 NA NA NA NA NA NA NA NA NA NA -0.375 0.843113449345744 -0.505868069607446 0.379401052205585 0.543619418085614 -0.117302740778538 0.351908222335615 0.645165074281961 NA -1.37830720414783 -0.674490759476595 -1.11437603739611 -0.557188018698057 NA 0.205279796362442 -0.850444870644403 NA -0.645165074281961 0.439885277919519 0.146628425973173 0.351908222335615 0.0293256851946346 -0.557188018698057 0.234605481557077 0.498536648308788 -0.733142129865864 -0.293256851946346 0.0879770555839037 -1.34898151895319 -0.0586513703892692 -0.439885277919519 0.586513703892691 0.439885277919519 0.0586513703892691 -0.645165074281961 0.0293256851946346 1.73021542648344 -0.410559592724884 -0.674490759476595 2.40470618596003 NA -1.84751816726198 0.146628425973173 1.6129126857049 0.938421926228306 -0.293256851946346 0.909096241033672 0.32258253714098 0.0586513703892691 NA 1.17302740778538 -0.146628425973173 0.469210963114153 0.967747611422941 0.674490759476595 NA 0.469210963114153 1.43695857453709 0.557188018698057 0.967747611422941 1.64223837089954 NA NA -0.0867202405041337 NA -1.7 -0.45 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 0.388343164547131 1.37964018983849 0.560346169411325 -2.78789513916993 -0.314762354422411 0.134898151895319 1.93354017716624 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 1.76673063449998 -0.565701927302951 -0.674490759476595 0.21149286525961 -0.971723975517129 NA NA NA NA NA -0.494626556949503 -0.652007734160709 1.26553936314165 0.584095090680763 -0.820514532146786 0.593551868339404 -1.63676424299654 1.34898151895319 0 0.6 0.277731489196245 0.71416668650463 1.74574078923354 NA NA NA NA -0.372132832814673 0 -0.0348874530763756 1.52192786753693 -0.225 -0.422601074429612 NA NA NA NA NA 0.89932101263546 0
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RV3446C -2.02347227842979 0.323755564548766 -0.917307432888169 -0.836368541750978 0.242816673411574 NA 0.25 0.5 -1.65888267871271 -1.80471851859954 NA 0.60157283953318 -0.638031799504888 -2.93494627772248 NA NA NA NA NA NA -0.216800601260334 -1.13218091769286 0.216800601260334 1.13218091769286 -0.144533734173556 0.433601202520668 0 -0.481779113911854 NA 0.511682645120176 -0.674490759476595 -0.139549812305502 NA -1.06988189434219 -0.883815477934849 -0.279099624611005 -0.232583020509171 0.139549812305502 -0.837298873833015 -0.255841322560088 -0.790782269731181 -0.302357926661922 0.186066416407337 0.16280811435642 0.604715853323844 0.0465166041018342 -0.721007363578429 0.209324718458254 0.255841322560088 0.279099624611005 0.372132832814673 -0.372132832814673 NA -1.16291510254585 -0.9535903840876 0.255841322560088 NA NA 0.186066416407337 0.0697749061527512 0.930332082036683 -0.0232583020509171 NA 1.65133944561511 -0.9535903840876 -0.976848686138517 0.16280811435642 1.60482284151328 1.51178963330961 -0.116291510254585 2.34908850714262 NA 0.372132832814673 NA NA 0.325616228712839 -0.604715853323844 -0.186066416407337 0.279099624611005 0.232583020509171 2.95380436046647 3.02357926661922 0.116291510254585 0.441907738967424 3.32593719328114 1.68622689869149 NA -0.989253113899006 -0.134898151895319 0 -1.05 NA NA NA NA NA NA NA NA NA 0.564369819153886 NA 1.85829086794572 1.2801559312515 NA NA 0.71512273293904 -1.88532356865747 1.80041234222493 0.0539592607581276 -0.485633346823149 0.296775934169702 3.07567786321327 NA NA NA NA NA NA NA -0.174062131477831 0.152304365043102 -1.21843492034482 1.17491938747536 -2.04523004486451 -1.89292567982141 NA -0.761521825215511 -1.32722375251846 -1.08788832173644 0.456913095129307 0.826795124519697 1.19667715391009 0.130546598608373 NA -2.04523004486451 -1.71886354834358 -0.39163979582512 1.39249705182265 0.261093197216747 -0.19581989791256 -0.282850963651475 0.348124262955662 0.630975226607138 -0.130546598608373 -0.913826190258613 -1.06613055530172 0.696248525911324 -1.24019268677955 -0.9790994895628 -0.0870310657389155 -0.0435155328694577 -1.34898151895319 0.0870310657389156 2.04523004486451 -1.78413684764777 -1.61007471616994 1.26195045321428 -0.500428627998764 -0.39163979582512 -0.718006292346053 -0.652732993041866 0.892068423823884 0.478670861564035 -0.58745969373768 -0.108788832173644 -0.826795124519697 0.696248525911324 0.652732993041866 1.00085725599753 -0.565701927302951 2.95905623512313 0.304608730086204 0.239335430782018 0.805037358084969 -0.500428627998764 -0.0217577664347288 -1.39249705182265 -0.696248525911324 -0.718006292346053 -0.282850963651475 0.239335430782018 0.935583956693342 2.61093197216747 0.478670861564035 0.0870310657389156 -0.152304365043102 1.47952811756156 1.08788832173644 1.04437278886699 -0.652732993041866 -0.870310657389155 -0.565701927302951 0.217577664347289 0.0652732993041867 -1.54480141686575 0.609217460172409 -0.19581989791256 0.0217577664347289 1.45777035112684 1.08788832173644 1.67096064693379 -0.0832704641329129 -0.139249705182265 0.800685804798023 -0.687545419337433 -0.524603924037352 -0.836868164535776 -0.362226518978172 NA 0.961773860735145 -0.663058712705805 -0.308665262811323 1.33891449269235 0.332211866607875 -0.795295074606732 0.674490759476595 -0.910027215166834 0.149886835439243 -1.3068258464859 0.674490759476595 -1.01173613921489 1.79864202527092 0.786905886056028 -0.337245379738298 NA NA NA NA NA NA NA 0.869343645547612 0 NA NA 1.83768936515555 NA -0.0315641280101038 0.5 0
RV3447C NA 1.05095071825423 -0.799977412402473 -0.65880492786086 1.14506570794864 NA 0.55 1.65 0.421556724672872 -0.140518908224291 -1.26467017401862 -0.224830253158865 -0.477764287962588 NA NA NA NA NA NA NA -0.380481966884233 -1.34898151895319 0.380481966884233 1.34898151895319 -0.425 -0.674490759476595 0.674490759476595 -0.457690158216261 NA -0.879770555839037 -0.146628425973173 -0.557188018698057 -0.997073296617575 -0.234605481557077 0.498536648308788 -0.64516507428196 -0.175954111167807 -0.733142129865864 -0.70381644467123 -0.70381644467123 0.586513703892691 -1.78886679687271 -1.7008897412888 -1.29033014856392 -1.43695857453709 0.0293256851946346 -0.439885277919518 -1.64223837089954 NA -1.14370172259075 -0.175954111167807 0.146628425973173 -0.64516507428196 -1.81819248206734 -0.879770555839037 0.234605481557077 0.645165074281961 0.645165074281961 -0.32258253714098 -0.821119185449768 0.586513703892691 -0.146628425973173 -0.791793500255133 2.40470618596003 -0.70381644467123 -1.90616953765125 1.17302740778538 1.73021542648344 1.37830720414782 -0.410559592724884 2.25807775998686 2.17010070440296 0.791793500255134 -1.23167877817465 3.51908222335615 1.64223837089954 1.70088974128881 3.54840790855078 -0.791793500255133 -1.17302740778538 2.43403187115467 0.498536648308788 NA 0.909096241033672 2.96189420465809 0.858442784788394 -0.674490759476595 -0.674490759476595 0 -0.936792721495271 0.524603924037352 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 0.377947408327402 -1.71529977625513 3.35 -3.07736409011197 -0.29508970727101 0.252934034803723 3.58323215971941 NA NA NA NA NA NA NA 0.0697749061527512 -0.325616228712839 -1.2326900086986 0.55819924922201 -0.767523967680264 -0.0465166041018341 -0.0465166041018341 -0.674490759476595 -0.302357926661922 NA 1.48853133125869 0.767523967680263 -0.16280811435642 -1.02336529024035 NA NA -1.20943170664769 -0.511682645120176 1.60482284151328 -0.255841322560088 NA NA 0.39539113486559 1.67459774766603 -0.581457551272927 -0.511682645120176 -0.255841322560088 0.39539113486559 -2.27931360098987 -2.88402945431372 -1.00010698818943 -1.2326900086986 -3.8143615363504 -0.441907738967424 1.93043907022612 -0.488424343069259 -1.32572321690227 1.18617340459677 0.441907738967424 -0.534940947171093 -1.0931401963931 -0.930332082036683 3.76784493224857 0.604715853323844 0.860557175883932 NA -0.883815477934849 2.06998888253162 NA 1.46527302920778 -0.255841322560088 2.41886341329538 2.00021397637887 -1.46527302920778 0.581457551272927 -2.09324718458254 -0.418649436916507 -1.97695567432795 -1.55830623741144 -1.06988189434219 0.186066416407337 NA NA 1.53504793536053 1.32572321690227 1.37223982100411 -0.790782269731181 3.27942058917931 2.5816715276518 3.07009587072105 -1.9071807681752 -1.00010698818943 -1.44201472715686 0.534940947171093 0.139549812305502 -0.488424343069259 1.88392246612428 -0.39539113486559 0.534940947171093 1.20943170664769 0.627974155374761 1.36527356628354 -0.159662063837455 -0.674490759476595 0.344630315061034 -0.846805917007112 NA NA NA NA NA -1.29335341507883 -0.264233493403202 1.19278365886387 1.44838015719185 -0.113598443701321 0.31659770342779 -2.17488857137351 0.220241880645419 -1.425 0 NA NA NA NA NA NA NA -0.711281164538955 -0.515065670873036 -2.13384349361686 1.48570261884709 0.38912928431342 NA NA NA NA NA NA 0.249999999999999 -0.750000000000001
RV3448 NA -0.366828307785517 -1.95247325111646 -0.461493677536618 1.07681858091877 NA 0.910562525293404 -0.236071765816808 -1.56359221515029 -2.36071765816808 0.551856075935396 0.521197405050096 -0.827784113903094 NA NA NA NA NA NA NA -0.240229585567007 -2.10662867343375 0.240229585567007 2.10662867343375 -0.15 0.285361475163175 0.907968330064647 -0.285361475163175 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 0.31740741622428 0 -0.224830253158865 2.13588740500922 NA NA NA NA NA NA NA NA NA NA NA NA NA 0.543619418085614 -2.2751479349509 NA -2.42266068709961 -0.192711645564741 -0.220241880645419 1.80323039778437 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 0.44966050631773 -0.44966050631773 -0.704883757303963 0.548242922347527 -0.548242922347527 NA -1.75180238919616 1.3677173733831 -1.24593431958871 1.42392493667281 -0.578134936694225 -0.926851247716138 0.382819079702932 1.54950579879758 -1.00262139922197 0.269796303790638 -0.662227291122475 NA -0.674490759476595 1.06498540969989 NA NA NA NA NA NA NA NA NA NA NA 0.728450020234723 NA NA NA NA NA NA -0.5 1
RV3449 NA NA NA NA NA NA 0.674490759476595 2.2874034451815 -0.366152126573009 -1.00210055693666 1.09845637971903 1.40679501262261 -0.982829392380182 NA NA NA NA NA NA NA -0.146628425973173 NA 0.146628425973173 NA -0.722668670867781 0.514442104685539 1.42900584634872 -1.31468537864082 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA -0.674490759476595 0.235287474236022 -1.31832284806789 -0.367904050623597 -0.0269796303790638 2.40118710373668 NA NA NA NA NA NA NA NA NA NA NA NA NA 1.16668671909465 -3.91933819695859 NA -0.69135302846351 -0.202347227842979 0.472143531633617 1.83798731957372 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA 1.4430210959956 -0.301575195342901 -0.814294298713562 0.534687220239628 -0.951645144279705 NA NA NA NA NA -2.28202706956248 0.0786905886056028 1.27735418166364 0.596894477412916 -0.405888244640783 1.05670218984667 -1.22532487971581 -0.168622689869149 -1.8 0 NA NA NA NA NA NA NA NA NA NA NA 0.871217230990602 -1.08331229483776 NA NA NA NA NA 0.25 -0.25
RV3453 NA NA NA NA NA NA 0.496993191193281 0.638991245819932 0.435155328694578 0.718006292346053 1.04437278886699 1.50128588399629 -0.108788832173644 0.348124262955662 NA NA NA NA NA NA -0.198379635140175 NA 0.198379635140175 NA -0.429221392394197 1.11031555790763 0.612230073986448 -0.34243377019581 NA 0.261093197216747 -0.239335430782018 -0.630975226607137 -1.37073928538792 -1.56655918330048 -1.17491938747536 -0.0217577664347288 -0.565701927302951 -0.500428627998764 -2.43686984068963 NA NA -0.609217460172409 -0.239335430782018 -0.0870310657389155 -0.239335430782018 -0.522186394433493 -0.892068423823884 -0.478670861564035 -0.500428627998764 NA -0.413397562259849 -0.630975226607137 NA -0.543944160868222 -1.00085725599753 0.19581989791256 -0.369882029390391 0.174062131477831 -0.718006292346053 -0.304608730086204 0.826795124519697 -0.630975226607137 0.108788832173644 4.3733110533805 -0.58745969373768 -1.283708219649 1.63183248260467 3.19839166590515 0.130546598608373 -1.1314038546059 2.2628077092118 NA 0.261093197216747 NA 1.06613055530172 1.00085725599753 0.892068423823884 NA -0.761521825215511 -0.957341723128071 2.08874557773397 2.41511207425491 0.848552890954426 NA 3.89464019181647 0.656504339223886 -0.620531498718468 -0.0546884399575618 -1.02085087920782 -0.800957776878457 -0.337245379738298 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA -0.106099670030026 -3.74380264248807 NA -0.983632357570035 -0.955528575925177 0 3.11951976257925 NA NA NA NA NA NA NA -0.490538734164797 -0.797125443017794 -0.367904050623597 0.347464936700064 NA -0.981077468329593 -0.286147594929465 -0.551856075935396 -0.51097784808833 -0.470099620241263 0.592734303782463 -0.224830253158865 0.551856075935396 NA NA NA -1.55337265818852 -0.633612531629529 1.45117708857086 -0.408782278470664 -0.429221392394197 NA 0.51097784808833 1.71688556957679 -1.75776379742385 -1.20590772148846 -0.96063835440606 1.53293354426499 -1.88039848096505 -1.98259405058272 -1.67600734172972 -0.654051645553062 -1.73732468350032 -0.0408782278470664 1.41029886072379 0.388343164547131 -1.18546860756493 1.28766417718259 -0.44966050631773 -0.388343164547131 0.694929873400128 -0.735808101247195 NA 0.0204391139235332 0.858442784788394 NA -0.817564556941328 0.715368987323662 NA 0.143073797464732 -1.43073797464732 1.30810329110612 1.47161620249439 -0.613173417705996 0.44966050631773 -1.96215493665919 0.163512911388266 NA -0.44966050631773 -0.470099620241263 NA -0.102195569617666 1.83952025311799 1.85995936704152 1.32854240502966 0.347464936700064 -2.06435050627685 NA 2.35049810120632 1.85995936704152 -1.69644645565325 0.0204391139235332 -1.16502949364139 0.797125443017794 0.388343164547131 -0.470099620241263 0.306586708852998 NA 0.429221392394197 1.30810329110612 2.80015860752405 0.180912973387308 -0.180912973387308 -1.00654774875738 0.648548807189034 -0.435824798431031 NA NA NA NA NA -0.907350664533991 -0.377393639230952 1.07386028811405 0.18637244669748 -1.14485931542738 1.19689046534572 -2.1887886410466 1.11753861128965 -0.75 0 NA NA NA NA NA NA NA -1.02261502243226 -0.674490759476595 NA -0.490538734164797 1 NA NA NA NA NA NA 0.224830253158865 -0.674490759476595
RV3785 NA -1.31832284806789 -0.551856075935396 -1.01173613921489 0.275928037967698 -0.569101578308377 0 -0.370969917712128 -0.549585063277226 -0.749434177196217 0.599547341756973 0.849358734155712 -0.774415316436091 -0.974264430355082 NA NA NA NA NA NA -0.595138905420525 -1.22995373786909 0.595138905420525 1.22995373786909 -0.15 0.387832186699042 0.286658572777553 0.370969917712127 1.1293798763329 -0.208478962020038 -1.04239481010019 -1.18955643034963 -1.23861030376611 -0.0122634683541199 -0.453748329102437 -0.0367904050623597 -0.331113645561238 -1.16502949364139 -1.55746048097323 NA 1.01786787339195 -0.919760126558993 -0.331113645561238 0.0367904050623598 -0.404694455685957 -0.576383012643636 -0.331113645561238 -0.404694455685957 NA -0.551856075935396 -0.551856075935396 -0.502802202518916 -1.63104129109795 -0.380167518977717 0.159425088603559 -0.0613173417705995 0.748071569601315 1.11597562022491 -0.331113645561238 -0.282059772144758 0.527329139227156 0.208478962020039 -0.502802202518916 3.05360362017586 -0.600909949351876 -1.68009516451443 0.429221392394197 1.41029886072379 2.07252615184627 -0.404694455685957 2.78380731638522 1.92536453159683 0.674490759476595 NA 1.31219111389083 0.846179316434274 1.16502949364139 5.113866303668 -0.502802202518916 -1.09144868351667 1.21408336705787 3.3233999239665 -0.183952025311799 0.772598506309555 1.77820291134739 0.370494924219538 -0.598491800662331 -0.737234085939534 0.0470574948472043 NA NA 0 1.3 0.2 1.125 0.125 NA NA 0.225 -0.725 0.831349075633943 0.298030800698961 0.909778233712617 0.376459958777634 -0.0870310657389155 1.39249705182265 0.407831622009104 -2.98030800698961 -0.116291510254586 -0.835083797447213 -0.401482594926545 0.208770949361803 1.6380489873003 0.159747811454983 NA -0.0532492704849944 -0.177497568283314 -0.567992218506606 -0.283996109253303 -0.212997081939977 -0.398562721508897 -0.643832088591295 -0.490538734164796 0.735808101247195 -0.367904050623597 -1.62490955692089 0.0306586708852998 -1.59425088603559 -1.62490955692089 -0.705149430361895 1.07305348098549 1.25700550629729 0.521197405050096 NA -0.490538734164796 -2.11544829108568 -1.50227487337969 -0.827784113903094 0.0919760126558993 -1.22634683541199 -0.827784113903094 NA 0.367904050623597 0.306586708852998 -0.490538734164796 -0.275928037967698 -0.337245379738298 0.275928037967698 -0.0919760126558993 -2.63664569613578 -1.16502949364139 -1.07305348098549 -0.950418797444293 -0.705149430361895 1.37964018983849 -0.889101455673694 -1.01173613921489 1.90083759488859 -0.674490759476595 -1.71688556957679 -0.459880063279497 -1.28766417718259 NA 0.827784113903094 0.950418797444293 1.13437082275609 -0.521197405050096 1.77820291134739 1.83952025311799 0.153293354426499 -0.122634683541199 3.37245379738298 2.36071765816808 -0.858442784788394 0.766466772132494 -1.22634683541199 0.766466772132494 -0.582514746820696 -0.858442784788394 -0.459880063279497 -0.490538734164796 0.490538734164796 1.90083759488859 1.34898151895319 0.950418797444293 1.22634683541199 -2.11544829108568 1.37964018983849 1.16502949364139 1.90083759488859 -0.950418797444293 -0.183952025311799 -0.429221392394197 0.306586708852998 0.398562721508897 -0.705149430361895 0.950418797444293 -0.521197405050096 0.459880063279497 1.53293354426499 1.62490955692089 2.06147175783692 0.0854988286660473 -1.08505035220148 0.305825002744046 -0.305825002744046 0.197042244341477 -0.454712871557255 0.46986996727583 -1.65212343332469 0.636598020180157 -0.456273160822403 0.575300941906508 0.192711645564741 -0.605665171774902 -1.81699551532471 0.0674490759476594 -0.957776878456765 0.930797248077701 NA NA -0.15 0.5 1.05 1.25 5.20321443024802 0.616677265807173 1.46460850629204 -0.192711645564741 -0.332865569611826 -0.911000506306051 0.662446281628799 -0.05 -0.18540537 -0.86119860269564 -0.149147886141546 NA NA NA 0.505868069607447 -1.18035882908404
[+] Show/hide bicluster #313 motif PSSM #1. bicluster 313 motif PSSM #1 Mycobacterium tuberculosis H37Rv 19x4
POSITION A C G T
1 0 0.111111 0.888889 0
2 0 1 0 0
3 0 0 1 0
4 0.222222 0.444444 0.333333 0
5 0.444444 0.111111 0.444444 0
6 0.777778 0 0.111111 0.111111
7 0 0.333333 0.222222 0.444444
8 0.555556 0 0.111111 0.333333
9 0.666667 0 0.333333 0
10 0 0.222222 0.222222 0.555556
11 0.222222 0.666667 0 0.111111
12 0.333333 0.444444 0.222222 0
13 0.333333 0 0.666667 0
14 0.111111 0.888889 0 0
15 0.111111 0.555556 0 0.333333
16 0.333333 0 0.666667 0
17 0.111111 0.555556 0.222222 0.111111
18 1 0 0 0
19 0.666667 0 0 0.333333 [+] Show/hide bicluster #313 motif PSSM #2. bicluster 313 motif PSSM #2 Mycobacterium tuberculosis H37Rv 20x4
POSITION A C G T
1 0 0.625 0.375 0
2 0 0.375 0.625 0
3 0 0 0.125 0.875
4 0 0.5 0 0.5
5 0 0.875 0 0.125
6 0 0.75 0.125 0.125
7 0.125 0 0.875 0
8 0 0.125 0.875 0
9 0 0 0.125 0.875
10 0 0.25 0.75 0
11 0.875 0 0.125 0
12 0.125 0 0.125 0.75
13 0.5 0.5 0 0
14 0.125 0.5 0 0.375
15 0 0 0.75 0.25
16 0.5 0 0.5 0
17 0 0.125 0.5 0.375
18 0.375 0.25 0 0.375
19 0.5 0 0.375 0.125
20 0 0.25 0 0.75 |