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[+] Show/hide bicluster #320 rows and columns.
bicluster 320
Mycobacterium tuberculosis H37Rv
11x235
[+] Show/hide bicluster #320 rows (genes).
bicluster 320 genes
Mycobacterium tuberculosis H37Rv
11
[+] Show/hide bicluster #320 rows (short gene names).
bicluster 320 short names
Mycobacterium tuberculosis H37Rv
11
short_name
[+] Show/hide bicluster #320 rows (long gene names).
bicluster 320 long names
Mycobacterium tuberculosis H37Rv
11
long_name
[+] Show/hide bicluster #320 rows (NCBI RefSeq gene IDs).
bicluster 320 NCBI RefSeq IDs
Mycobacterium tuberculosis H37Rv
22
[+] Show/hide bicluster #320 gene upstream sequences.
bicluster 320 upstream sequences
Mycobacterium tuberculosis H37Rv
11
upstream
[+] Show/hide bicluster #320 columns (arrays; conditions).
bicluster 320 arrays
Mycobacterium tuberculosis H37Rv
235
[+] Show/hide bicluster #320 ratios.
bicluster 320 ratios
Mycobacterium tuberculosis H37Rv
11x235
GENES 2885:::H37Ra..7H9.roll.replicate.2 2885:::H37Rv..7H9.roll.replicate.1 4055:::H37Rv.Vs.M.bovis.rep4 4060:::H37Rv.0.05..SDS.exposure.for.1h.rep.3 4060:::H37Rv.sigE.null.0.05..SDS.exposure.for.1h.rep.5 4062:::H37Rv.ctrl.vs.Rv3132.3134.KO..0.05.mM.DETA.NO.40min.rep.1 4062:::MTB.strain.1254.Ctrl.vs.2hr.Hypoxia.rep.1 4062:::MTB.strain.1254.Ctrl.vs.high.aeration...0.005.mM.DETA.NO.rep.1 4062:::MTB.strain.1254.Ctrl.vs.low.aeration...0.005.mM.DETA.NO.rep.3 4068:::H37Rv.SDS.treated.vs..H37Rv.delta.mprAB.mutant.SDS.treated.rep.2 4068:::H37Rv.SDS.treated.vs..H37Rv.delta.mprAB.mutant.SDS.treated.rep.6 4068:::H37Rv.vs..H37Rv.delta.mprAB.mutant.rep.2 4084:::High.iron.wt.vs.high.iron.ideR.Complement.2a 4089:::H37Rv.whiB7.null.vs..H37Rv.whiB7.null.with.whiB7.over.expression.rep.4 4089:::H37Rv.wild.type.vs..H37Rv.whiB7.null.rep.5 4089:::H37Rv.wild.type.vs..H37Rv.whiB7.null.with.whiB7.over.expression.rep.5 4089:::MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.2.hr..ref..rep.2 4089:::MTB1254.control.vs..100.ug.ml.Streptomycin.for.15.min.rep.1 4089:::MTB1254.control.vs..100.ug.ml.Streptomycin.for.15.min.rep.4 4089:::MTB1254.vs..MTB1254.rep5 4101:::H37Rv.Day.0.vs.low.Oxygen.Day.4.rep.5 4101:::H37Rv.Day24.3 4101:::H37Rv.Day8.3 4101:::NRP.Day14..5 4107:::DIPED..100ug.mL..DMSO..12h..2 4107:::H2O2.4mM.vs.ctrl.12h.1 4107:::Mtm.0.2ug.mL.vs.ctrl.8h.2 4107:::Palmitate.Glucose..1 4107:::Palmitate.Glucose..2 4107:::pH4.8vspH6.8..5.5h. 4107:::pH4.8vspH6.8..7h. 4107:::pH5.2vspH6.8..10.5h. 4107:::pH5.6vspH6.8..11h. 4107:::pH5.6vspH6.8..16h. 4107:::Rif.0.5ug.mL.vsDMSO.2.5hA 4107:::Rif.5ug.mL.vsDMSO.2.5hA 4107:::UV.20J.vs.ctrl.8h.1 4107:::UV.40J.vs.8h.2 4107:::UV.40J.vs.ctrl.8h.1 4107:::UV.60J.vs.ctrl.6h.1 4107:::WT.t.6h.WT.t.0h..1 4107:::WT.t.6h.WT.t.0h..2 4107:::X0.05mM.Palmitate.10mM.Gluc..1 4107:::X0.05mM.Palmitate.10mM.Gluc..2 4107:::X0.05mM.palmitatevs10mM.gluc 4107:::X0.12mg.mL.BZA.pH5.6..2h. 4107:::X0.12mg.mL.BZAvspH5.6..5h. 4107:::X0.12mg.mL.NamvspH5.6..4h. 4107:::X0.12mg.mL.PZA.pH5.6..4h..2 4107:::X0.12mg.mL.PZAvspH5.6..4h.A 4107:::X0.1mM.GSNOvsDMSO..6h.A 4107:::X0.2ug.mL.Mtm.ctrl..4h...1 4107:::X0.2ug.mL.Mtmvsctrl..2h. 4107:::X0.2ug.mL.Mtmvsctrl..2h.C 4107:::X0.2ug.mL.RifvsDMSO..6hA 4107:::X1.2mg.mL.NamvspH5.6..10.5h. 4107:::X1.2mg.mL.NamvspH5.6..5h. 4107:::X1.2mg.mL.PZA.pH5.6..2h.. 4107:::X1.2mg.mL.PZAvspH5.6..4h. 4107:::X1.2mg.mL.PZAvspH5.6..7h.A 4107:::X100ug.mL.Cephalexin.Ctrl..6h 4107:::X100ug.mL.Cphx.DMSO..6h 4107:::X100ug.mL.TriclosanvsEtOH..6h 4107:::X10mM.Succinate.10mM.Gluc..2 4107:::X10mM.succinatevs10mM.glucose 4107:::X10ug.mL..241vsDMSO..6h 4107:::X10ug.mL.CapvsEtOH..6h 4107:::X10ug.mL.PA.1vsDMSO..6hA 4107:::X10ug.mL.PA.21vsDMSO..6hA 4107:::X10ug.mL.TriclosanvsDMSO..6hC 4107:::X1ug.mL..121940.DMSO..12h 4107:::X1uM.ValinomycinvsDMSO..6h.B 4107:::X20ug.mL.methoxatinvsDMSO..6h 4107:::X20ug.mLProcept6778vsDMSO.6hB 4107:::X24ug.mL.cltrmazole.DMS..6h..3 4107:::X24ug.mL.Econazole.DMSO..6h..2 4107:::X2ug.mL.PA824.DMSO..6h..1 4107:::X40ug.mL.5CL.pH5.6..2h..2 4107:::X4mM.H2O2.ctrl..2h...2 4107:::X4mM.H2O2.ctrl..4h...1 4107:::X4mM.H2O2.ctrl..4h...2 4107:::X4mM.H2O2vsctrl..2h.A 4107:::X50ug.mL.PA.1vsDMSO..6h 4107:::X50ug.mL.PA.21vsDMSO..6h 4107:::X50ug.mL.PA.21vsDMSO..6hA 4107:::X50ug.mL.RoxvsEtOH..6hA 4107:::X50ug.mL.TriclosanvsEtOH..6h 4107:::X50ug.mL.TriclosanvsEtOH..6hA 4107:::X5ug.mL.AmivsEtOH..6h 4107:::X5ug.mL.KCN.DMSO..6h..1 4523:::H37Rv.sigB.null.mutant.control.vs.0.05..SDS.for.60.min.rep.1 4523:::H37Rv.sigB.null.mutant.control.vs.0.05..SDS.for.60.min.rep.3 4523:::H37Rv.sigB.null.mutant.control.vs.0.05..SDS.for.60.min.rep.4 4523:::H37Rv.sigB.null.mutant.control.vs.0.05..SDS.for.60.min.rep.5 4523:::H37Rv.wild.type.control.vs.0.05..SDS.for.60.min.rep.1 4523:::H37Rv.wild.type.control.vs.0.05..SDS.for.60.min.rep.2 4523:::H37Rv.wild.type.control.vs.0.05..SDS.for.60.min.rep.3 4523:::H37Rv.wild.type.control.vs.0.05..SDS.for.60.min.rep.4 4523:::H37Rv.wild.type.control.vs.0.05..SDS.for.60.min.rep.6 4523:::H37Rv.wild.type.control.vs.5mM.Diamide.for.60.min.rep.2 4523:::H37Rv.wild.type.vs.H37Rv.sigB.null.mutant.rep.2 4523:::H37Rv.wild.type.vs.H37Rv.sigB.null.mutant.rep.4 4523:::H37Rv.wild.type.vs.H37Rv.sigB.null.mutant.rep.6 4575:::Whole.Lung.Surfactant.30min.rep.2 4575:::Whole.Lung.Surfactant.30min.rep.5 4583:::X0.13mg.ml.TLM.vs.DMSO.6hrs.rep.1 4583:::X0.13mg.ml.TLM.vs.DMSO.6hrs.rep.2 4583:::X0.2ug.ml.Isoniazid.vs.Ethanol.6hrs.rep.2 4583:::X40ug.ml.Ethionamide.vs.Ethanol.6hrs.rep.2 4599:::H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.5 4599:::H37Rv.wild.type.vs.sigE.mutant.in.7H9.media.rep.3 4599:::SigE.mutant.grown.in.7H9.vs.24hrs.after.infection.in.macrophages..DS..rep.1 4599:::SigE.mutant.grown.in.7H9.vs.24hrs.after.infection.in.macrophages..DS..rep.2 4599:::SigE.mutant.grown.in.7H9.vs.24hrs.after.infection.in.macrophages..DS..rep.3 4615:::AA_30uM_10.min_07 4615:::AA_30uM_1h_01 4615:::AA_30uM_1h_02 4615:::AA_30uM_1h_06 4615:::AA_30uM_24h_02 4615:::AA_30uM_24h_04 4615:::AA_30uM_24h.AA_60uM_1h_01 4615:::AA_30uM_2h_04 4615:::AA_30uM_2h_08 4615:::AA_30uM_30min_04 4615:::Acetate.3mM.10m_04 4615:::Acetate.3mM.10m.02 4615:::Acetate.3mM.2h.05 4615:::CHP.AA.24h.1 4615:::CHP.AA.30m.1 4615:::CK.LA.2h.4 4615:::CK.PA.NA.101801.2 4615:::CK.PA.Na.2h.01 4615:::CK.PA.NA.2h.3..101801 4615:::ETYA_10uM_1h_02 4615:::ETYA_3uM.AA_1h_02 4615:::L2A_30uM_10min_05 4615:::L2A_30uM_2h_03 4615:::L2A_30uM_30min_02 4615:::L2A_30uM_4h_06 4615:::MAPP_5uM_4h_01 4615:::MDG.MD.glycerol 4615:::MDGCy3.7H9Cy5.02 4615:::MDGCy3.7H9Cy5.03 4615:::MTB1254_FA5_10min_01 4615:::MTB1254_FA5_10min_02 4615:::MTB1254_INH_20MIN 4615:::MTB1254_Pellicle_10D_04 4615:::MTB1254_Pellicle_42D_03 4615:::MTB1254_SDS_90MIN_01 4615:::MTB1254_SDS_90MIN_04 4615:::MTB1254.0485.1._AA_10m_01 4615:::MTB1254.0485.1._LA_10m_01 4615:::MTB1254.0485.1._OA_10m_04 4615:::MTB1254.0485.1._PA_10m_04 4615:::MTB1254.0485.1._PA_30m_04 4615:::MTB1254.3219.1._01 4615:::MTB1254.B4.1._PA_30MIN_02 4615:::MTB1254.B4.1._PA_30MIN_03 4615:::MTB1254.B4.1._PA_30MIN_04 4615:::MTB1254.B4.1.Compl._OA_30MIN_03 4615:::MTB1254.B4.1.Compl._PA_30MIN_02 4615:::MTB1254.B4.1.Compl._PA_4h_01 4615:::MTB1254.Rv3524.2.compl._PA50.OA30_30m_02 4615:::MTB1254whiB4_SDS_90MIN_01 4615:::MTB1254whiB4_SDS_90MIN_02 4615:::MTB1254whiB4_SDS_90MIN_04 4615:::MTB6548_PA50_1h_02 4615:::OA_50uM_1h_04 4615:::OA_50uM_1h_05 4615:::OA_50uM_1h_06 4615:::OA_50uM_2h_01 4615:::OA_50uM_2h_03 4615:::OA_50uM_2h_05 4615:::OA_50uM_2h_06 4615:::OA_50uM_2h_07 4615:::OA_50uM_2h_10 4615:::OA_50uM_2h..0.5.BSA.10mMGlu._30min_01 4615:::OA_50uM_2h.1.5..BSA_30min_01 4615:::OA_50uM.0.5.BSA_4h_01 4615:::PA_300uM_2h_T0_01 4615:::PA_50uM_1h_01 4615:::PA_50uM_24h_09 4615:::PA_50uM_30.min_04 4615:::PA_50uM_30.min_06 4615:::PA_50uM_30.min_07 4615:::PA_50uM_30min_09 4615:::PA_50uM_4h_03 4615:::PA_50uM.MAPP_30m_01 4615:::PA_50uM.OA_30uM_4h_02 4615:::Rv.3524.1._01 4615:::Rv.MT106_100603_01 4615:::Rv.MT96_100603_01 4615:::Rv.pMV0481.1. 4615:::SDS_3h_01 4615:::Starvation_1254_12h_01 4615:::Starvation_1254_24h_01 4615:::Starvation_1254_3d_03 4615:::Starvation_1254_6h_02 4615:::Starvation_1254_PA50_6h_03 4615:::TBD043 4615:::TBD1276 4615:::TBD819 4615:::Test.4 4615:::Tet_50ng_30M_01 4630:::H37Rv.wild.type.Cy5.vs.Rv0485.Tn.mutant.Cy3..DS..rep.2 4696:::H37Rv.wt.vs.dosS.dosT.null.rapid.anaerobic.dormancy.day.6.rep.1 4699:::CDC1551.Ctrl.vs.clinical.isolate.2169.99_Uganda.rep.3 4699:::CDC1551.Ctrl.vs.clinical.isolate.5468.02_Afri2.rep.1 4703:::Clinical.isolate.10514.01_Afri2.extra.vs.intracellular.in.resting.macrophages.rep.2 4703:::Clinical.isolate.12954.03_Beijing.extra.vs.intracellular.in.resting.macrophages.rep.2 4703:::Clinical.isolate.1500.03_Beijing.extra.vs.intracellular.in.resting.macrophages.rep.1 4703:::Clinical.isolate.2169.99_Uganda.extra.vs.intracellular.in.resting.macrophages.rep.2 4703:::Clinical.isolate.2333.99_Uganda.extra.vs.intracellular.in.resting.macrophages.rep.2 4703:::Clinical.isolate.4850.03_EAI.extra.vs.intracellular.in.resting.macrophages.rep.1 4703:::Clinical.isolate.5468.02_Afri2.extra.vs.intracellular.in.resting.macrophages.rep.1 4703:::H37Rv.extra.vs.intracellular.in.resting.macrophages.rep.2 4704:::Clinical.isolate.4130.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.1 4704:::H37Rv.extra.vs.intracellular.in.activated.macrophages.rep.2 4735:::BCG.wild.type.vs.BCG.with.pMFdosR.at.OD.0.4.rep.2 4735:::BCG.wild.type.vs.BCG.with.pMFdosR.at.OD.0.4.rep.4 4795:::CDC1551.ctrl.vs.40.ug.ml.Thioridazine.4hr.rep.1 4795:::CDC1551.ctrl.vs.ctrl.at.0.hr.rep.2 4799:::H37Rv.ctrl.vs.1ug.ml.Isoniazid.for.6hrs.rep.3 4802:::H37Rv.ctrl.vs.relE1.overexpression.24.hr.rep.2 4802:::H37Rv.ctrl.vs.relE2.overexpression.72.hr.rep.3 4815:::H37Rv.reaeration.for.1hrs.rep.6 4815:::H37Rv.reaeration.for.24hrs.rep.6 4815:::H37Rv.reaeration.for.4hrs.rep.1 4815:::H37Rv.reaeration.for.4hrs.rep.5 4815:::H37Rv.reaeration.for.6hrs.rep.4 4928:::Mtb.Erdman.strain.2000.ppm.CO.rep.2 Milano_Tuberculosis2009:::H37Rv.wild.type.vs.H37Rv.Bif1.mutant.rep.2 Raghavan_Nature2008:::Complemented.espR.mutant..R...rep3 Rohde_CellHostMicrobe2007:::CDC1551.in.ctrl.vs.100.nM.Concanamycin.A.treated.macrophages.for.2.hr Schnappinger_JEM2003:::MTB.in.Wild.type.macrophages.for.48hrs
RV0110 -0.441013188888543 1.03767809150245 -0.532492704849943 0.348874530763756 -0.79078226973118 0.860557175883932 1.34898151895319 NA 0.186066416407337 NA NA NA 0.275 -2.1840653164004 -1.31686291135907 -1.31686291135907 0.995676835417831 0.160593037970618 0.674490759476595 0.513897721505977 0.431674086065021 NA 0.674490759476595 0.107918521516255 -1.90356281007839 1.21408336705787 1.6637438733756 -0.614536025300898 -2.08342701260548 0.254807620246714 0.494626556949503 1.12415126579433 0.464649189861654 -0.164875518983168 0.284784987334562 0.734445493652293 0.79440022782799 0.734445493652293 -0.0149886835439243 1.00424179744293 1.42392493667281 1.00424179744293 NA -0.10492078480747 -0.524603924037352 0.944287063267233 2.23331384804473 1.54383440502421 0.404694455685957 -0.134898151895319 -1.63376650628775 1.6037891391999 1.18410599997002 1.45390230376066 1.45390230376066 0.704468126564444 1.45390230376066 0.10492078480747 -0.314762354422411 1.27403810123357 -0.704468126564444 -1.24406073414572 1.7236986075513 -1.54383440502421 -0.494626556949503 0.674490759476595 -0.134898151895319 1.24406073414572 0.5545812911252 1.06419653161863 -0.674490759476595 -3.28252169611943 -1.96351754425409 0.854354962003687 -0.374717088598108 -1.42392493667281 0.34473972151026 0.5545812911252 0.34473972151026 1.03421916453078 0.944287063267233 1.48387967084851 0.194852886071016 0.614536025300898 -0.10492078480747 -0.674490759476595 1.51385703793636 1.12415126579433 0.044966050631773 -1.21408336705787 -0.494626556949503 -1.73119294932326 -0.809388911371914 NA -2.72044606322227 -3.28252169611943 -3.17010656954 -0.989253113899006 -2.0009892531139 0 1.10166824047844 1.23656639237376 1.19160034174198 -1.18790909877968 -1.04697073112785 1.31686291135907 1.12415126579433 -0.353304683535359 -0.80296518985309 0.553233993727994 0.856375908099497 -0.977632673848099 -0.886690099536648 -0.553233993727994 0.978011601241063 0.303520841764468 -0.505868069607446 2.39444219614191 1.07918521516255 0.539592607581276 0.472143531633616 0.505868069607446 2.36071765816808 0.168622689869149 0.236071765816808 0.607041683528936 0.0674490759476594 -1.78740051261298 -0.708215297450425 0.944287063267233 0.370969917712127 0.708215297450425 0.809388911371914 1.75367597463915 0.708215297450425 1.14663429111021 -0.168622689869149 1.18035882908404 0.505868069607446 0.472143531633616 NA 0.910562525293404 1.18035882908404 -0.236071765816808 -1.2478079050317 0.337245379738297 0.202347227842979 -3.57480102522595 -0.539592607581276 -0.337245379738298 -0.303520841764468 -0.741939835424255 -1.88857412653447 -1.34898151895319 -2.46189127208957 1.48387967084851 -0.573317145555106 -1.31525698097936 -1.9222986645083 -0.337245379738298 -0.674490759476595 -0.370969917712128 -0.843113449345744 -0.843113449345744 0.236071765816808 -0.539592607581276 -0.775664373398085 0.438418993659787 3.87832186699042 1.78740051261298 0.505868069607446 0.337245379738297 0.944287063267233 0.708215297450425 1.68622689869149 1.65250236071766 1.82112505058681 1.11290975313638 0.640766221502765 -0.370969917712128 -2.66423849993255 0.910562525293404 -2.39444219614191 -2.22581950627276 -2.32699312019425 -2.96775934169702 0.303520841764468 -0.809388911371914 0.573317145555106 1.11290975313638 0.472143531633616 0 0.168622689869149 -0.775664373398085 -3.23755564548766 -3.17010656954 -1.75367597463915 0.202347227842979 -0.438418993659787 0.978011601241063 0.337245379738297 1.01173613921489 0.101173613921489 0.843113449345744 -0.349735949358235 -1.76924114601168 0.55 0.55 0.932806369488908 1.21982371394703 -0.272666477235219 -0.157859539451969 0.760595962814033 -0.875402900597283 0.38747341501847 0.674490759476595 -0.199849113918991 0.333081856531652 NA NA 0.432692185324608 -0.941741815118265 -1.86561273897782 0.539592607581276 NA 1.7665234176768 2.77825955689169 -0.144533734173556 NA 2.02347227842979 -0.85 0.21108859 -0.654652795962578 0.18675 -0.134898151895319
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RV3364C 1.03983992085975 0.843113449345744 0.637700354414236 0.724453037956343 -1.29901924047344 0.604715853323844 0.976848686138517 0.325616228712839 0 -0.400121636977641 -0.0571602338539488 0.697354853018175 NA NA -0.275928037967698 0.275928037967698 0.613173417705996 1.25700550629729 0.183952025311799 0.398562721508897 1.2084626107289 1.12415126579433 -3.45676514231755 -0.843113449345744 -0.251505028957375 0.571602338539487 1.16606877062055 -0.388689590206852 -1.14320467707897 -0.800243273955282 0.045728187083159 1.85199157686794 0.663058712705806 1.14320467707897 0.320097309582113 1.16606877062055 0.274369122498954 1.21179695770371 0.845971461038441 0.91456374166318 0.091456374166318 0.548738244997908 0.137184561249477 -2.51505028957374 -0.137184561249477 0.480145964373169 2.88087578623902 0.342961403123692 1.1203405835374 -0.594466432081067 -1.41757379957793 1.30325333187003 1.46330198666109 1.46330198666109 0.571602338539487 0.777379180413703 1.41757379957793 -1.57762245436899 -1.16606877062055 0.205776841874215 -1.02888420937108 -1.50903017374425 2.49218619603217 -2.53791438311532 -0.205776841874216 0.274369122498954 -0.594466432081067 0.251505028957375 -0.228640935415795 0.228640935415795 -0.411553683748431 -0.434417777290011 -1.55475836082741 -0.754515086872124 -0.868835554580021 -0.503010057914749 -1.44043789311951 0.708786899788964 1.07461239645424 0.754515086872123 0.960291928746339 1.14320467707897 -0.182912748332636 0.205776841874215 0.274369122498954 -1.02888420937108 2.26354526061637 2.10349660582531 -1.44043789311951 -1.05174830291266 -0.912546321644805 -2.42023154871014 NA -0.198379635140175 -4.56273160822403 -3.68986121360726 -4.36435197308385 -0.15870370811214 -2.02347227842979 0.674490759476595 0.95222224867284 0.991898175700875 0.23805556216821 -0.839672169960659 -1.33521640141285 1.74437265381878 1.74437265381878 -1.95369737227703 -1.69785604971695 0.249811392398739 0.374717088598108 -2.79788759486588 -1.52384949363231 -0.724453037956343 0.15870370811214 0.515787051364455 0.277731489196245 0.23805556216821 0.0396759270280349 0.277731489196245 0.55546297839249 0.23805556216821 -0.15870370811214 0.0396759270280349 2.22185191356996 0.31740741622428 0.674490759476595 -1.62671300814944 -0.198379635140175 0.7935185405607 0.991898175700875 0.753842613532665 0.674490759476595 0.63481483244856 0.674490759476595 1.03157410272891 0.595138905420525 0.63481483244856 0.753842613532665 0.23805556216821 0.87287039461677 1.11092595678498 1.07125002975695 -0.833194467588735 -1.74574078923354 0.674490759476595 -0.87287039461677 -2.53925932979424 -1.19027781084105 -1.15060188381302 -1.19027781084105 -0.87287039461677 -1.42833337300926 -2.06314820545782 -1.54736115409337 1.34898151895319 0.07935185405607 -0.47611112433642 -1.70606486220551 -0.833194467588735 -1.54736115409337 -0.912546321644805 -0.912546321644805 -0.277731489196245 -0.71416668650463 -0.595138905420525 -1.26962966489712 2.18217598654193 1.38865744598123 1.70606486220551 0.833194467588735 1.66638893517747 1.03157410272891 0.674490759476595 0.515787051364455 0.991898175700875 1.26962966489712 1.38865744598123 -0.119027781084105 -0.47611112433642 -0.595138905420525 2.22185191356996 -1.78541671626158 0.357083343252315 -0.277731489196245 -1.07125002975695 1.26962966489712 -2.34087969465407 0.63481483244856 1.74574078923354 0.119027781084105 -0.15870370811214 1.22995373786909 -0.63481483244856 -4.72143531633617 -6.86393537585006 -3.76921306766333 -0.31740741622428 -1.15060188381302 1.54736115409337 -0.87287039461677 0.198379635140175 -0.71416668650463 0.31740741622428 -0.51097784808833 -1.40452781679244 -0.0539592607581276 0.107918521516255 0.95985223463977 0.907968330064647 -0.674490759476595 -0.337245379738298 0.726374664051718 -0.596664902613911 0.856084425489525 1.01173613921489 0.972060212186858 -1.76557875274756 0 NA -0.17878068323476 -0.146275104464804 -0.0465166041018342 0.923533501437184 1.6499081654889 0.771917202512103 1.43141927844477 -0.352234063282222 0.666996417704633 -0.00749434177196218 NA 0.674490759476595 -0.780542765683607 0.77825 -0.5
RV3366 NA NA NA -0.45 -1.1 0 -0.101173613921489 -0.134898151895319 0.472143531633617 NA NA NA 1.275 -2.02347227842979 -1.32790368271955 -0.189700526102792 0.400478888439228 1.51760420882234 NA 0.52694590584109 NA NA NA NA -0.521197405050096 0.643832088591295 1.16502949364139 -1.01173613921489 -2.26874164551218 -0.245269367082398 0.551856075935396 0.858442784788394 0.582514746820696 0.0306586708852998 0.582514746820696 1.25700550629729 0.429221392394197 0.398562721508897 0.245269367082398 0.398562721508897 0.490538734164796 0.490538734164796 -0.582514746820696 0.275928037967698 -0.459880063279497 -0.429221392394197 1.71688556957679 1.16502949364139 1.62490955692089 -0.153293354426499 -1.34898151895319 2.26874164551218 2.11544829108569 1.65556822780619 1.68622689869149 0.0919760126558993 0.889101455673694 -1.68622689869149 -0.735808101247195 0.613173417705996 0.214610696197099 -0.398562721508897 1.93149626577389 0.337245379738298 -0.643832088591295 0.0919760126558993 -1.16502949364139 0.735808101247195 0.950418797444293 0.0613173417705994 -0.183952025311799 -0.490538734164797 -1.90083759488859 0.551856075935396 -1.74754424046209 -1.04239481010019 -1.37964018983849 0.245269367082398 0.766466772132495 1.22634683541199 0.735808101247195 1.01173613921489 0.367904050623597 0.275928037967698 0.214610696197099 -1.50227487337969 1.93149626577389 1.71688556957679 -0.858442784788394 -0.613173417705996 -0.23805556216821 NA NA -0.15870370811214 NA NA -3.8485649217194 -2.14250005951389 -1.94412042437372 1.4680093000373 0 0.674490759476595 NA -0.816488814103247 0.470368555950784 1.28474430376494 1.92711645564741 -1.02779544301195 -1.50957455692381 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA -0.613173417705996 NA -0.0362629440578815 1.2546978644027 0.964777921782978 -0.572036466897872 -0.70864219033617 0.0597650040042553 0.315900735451064 -1.05015649893191 0.409817170314893 -0.0341514308595743 1.57610595836878 -1.03926637429557 -1.03421916453078 NA 0.378540732359314 -0.598782613004732 -0.278594009349028 0 1.21843492034482 0.151416292943725 0.619430289315241 -0.784611699799305 0.894732640122014 0.674490759476595 -1.01173613921489 NA 0.0938851606597458 0.139887272733553 0
RV3748 1.20780903441158 0.549004106550717 -1.86930296197799 0.953084768825624 -0.659827916879278 0.276430639129752 0.187972834608231 0.475460699303174 0.630261857215835 -0.0396759270280351 0.230120376762603 0.293601860007459 -0.525 -0.3 -0.55 -1 0.6 0.4 0.6 0.7 -0.134898151895319 1.21408336705787 -1.32971035439672 0.674490759476595 -1.02779544301195 0.256948860752989 1.34898151895319 -0.674490759476595 -1.0920326582002 -0.353304683535359 -0.224830253158865 1.86287924045917 0.867202405041337 0.738727974664842 1.28474430376494 0.995676835417831 1.28474430376494 0.321186075941236 -0.224830253158865 -0.0963558227823707 0.674490759476595 0.931439620229584 -0.546016329100101 -0.867202405041337 -0.353304683535359 0.192711645564741 2.56948860752989 1.15626987338845 0.128474430376494 -0.417541898723607 -0.931439620229584 0.80296518985309 0.128474430376494 -0.0321186075941236 1.25262569617082 2.28042113918277 1.7665234176768 -1.83076063286504 -0.610253544288348 -0.513897721505977 -1.54169316451793 -0.770846582258966 1.95923506324154 -1.0920326582002 -0.931439620229584 0.289067468347112 -0.0642372151882472 0.995676835417831 0.642372151882472 -0.0642372151882472 -0.44966050631773 -2.95491189865937 -0.546016329100101 1.6380489873003 -0.770846582258966 -1.50957455692381 -1.28474430376494 0.44966050631773 -0.0963558227823707 0.642372151882472 0.867202405041337 0.738727974664842 0.353304683535359 0.578134936694224 0.674490759476595 -0.0963558227823707 1.86287924045917 1.44533734173556 -0.417541898723607 -1.34898151895319 -2.46448546731833 -2.51636937189345 -0.0518839045751228 0.233477570588052 0.38912928431342 -1.71216885097905 -1.78999470784173 -0.544780998038788 -1.19332980522782 0.0259419522875613 0.778258568626841 0.830142473201963 1.21927175751538 -1.59543006568502 -1.33601054280941 1.57381177211206 1.50957455692381 0.0963558227823707 -0.0642372151882471 0.0989253113899006 0.890327802509106 -0.0989253113899006 -0.674490759476595 0.0269796303790638 0.885269121813031 0.505868069607446 1.55975988128963 0.505868069607446 0.716646431943882 1.09604748414947 0.969580466747606 0.337245379738298 0.590179414542021 1.6440712262242 0.505868069607446 0.927424794280318 1.01173613921489 -1.09604748414947 -0.75880210441117 -0.0421556724672872 0.337245379738298 0.126467017401862 0.716646431943882 -0.463712397140159 1.09604748414947 0.210778362336436 0.716646431943882 0.674490759476595 1.22251450155133 -0.29508970727101 1.89700526102792 1.6440712262242 1.93916093349521 -0.463712397140159 -1.51760420882234 0.716646431943882 -0.885269121813031 -3.45676514231755 -2.90874140024282 -2.57149602050452 -0.75880210441117 -0.126467017401862 -1.18035882908404 -1.89700526102792 -0.421556724672872 0.716646431943882 0.210778362336436 0.0421556724672872 -1.6440712262242 0.29508970727101 -0.0843113449345744 -0.674490759476595 -1.01173613921489 -0.969580466747606 -0.969580466747606 -1.81269391609335 -2.02347227842979 0.126467017401862 0.969580466747606 1.05389181168218 0.421556724672872 0.927424794280318 0.75880210441117 0.379401052205585 0.168622689869149 -0.0843113449345744 1.60191555375691 1.3068258464859 0.632335087009308 -0.969580466747606 -0.337245379738298 1.6440712262242 -1.34898151895319 -1.51760420882234 -0.421556724672872 -1.9813166059625 0.800957776878457 0.505868069607446 -0.800957776878457 1.26467017401862 0.337245379738298 0.337245379738298 -0.590179414542021 -0.379401052205585 -6.70275192229867 -5.52239309321462 -2.44502900310266 -2.02347227842979 -1.89700526102792 0.716646431943882 -0.75880210441117 0.252934034803723 1.01173613921489 0.252934034803723 -0.245269367082398 -1.47161620249439 -0.128474430376494 0.0642372151882472 0.408782278470664 0.490538734164797 -0.654051645553062 -0.613173417705996 1.14459037971786 -0.327025822776531 0.981077468329593 0.408782278470664 0.423965620242431 -0.192711645564742 -0.95 NA 0.889753767820189 -0.444876883910095 -0.407239703834925 0.298030800698961 2.43130390043889 -0.424679367077856 0.5745662025171 -0.89932101263546 1.02422670883483 2.37320822778802 -1.35 1.456164575 0.055 0.0235287474236022 -0.5
[+] Show/hide bicluster #320 motif PSSM #1. bicluster 320 motif PSSM #1 Mycobacterium tuberculosis H37Rv 18x4
POSITION A C G T
1 0 0 0 1
2 0 0 1 0
3 0 0 0 1
4 0 1 0 0
5 1 0 0 0
6 0 0.333333 0 0.666667
7 1 0 0 0
8 0 1 0 0
9 0.333333 0 0 0.666667
10 0 1 0 0
11 0 0 1 0
12 0 0.333333 0 0.666667
13 0 1 0 0
14 0 0 1 0
15 0 0.333333 0.666667 0
16 1 0 0 0
17 0 0 0 1
18 0 0 0 1 [+] Show/hide bicluster #320 motif PSSM #2. bicluster 320 motif PSSM #2 Mycobacterium tuberculosis H37Rv 24x4
POSITION A C G T
1 0.25 0.125 0 0.625
2 0.125 0 0.875 0
3 0 0.25 0 0.75
4 0 0.375 0 0.625
5 0 0.125 0.75 0.125
6 0.25 0.25 0 0.5
7 0 0.375 0 0.625
8 0 0 0.625 0.375
9 0.75 0 0.125 0.125
10 0 0.75 0.25 0
11 0 0 0.75 0.25
12 0 0.25 0 0.75
13 0 0.75 0.125 0.125
14 0 0.25 0.375 0.375
15 0 0 0.625 0.375
16 0 0.5 0.25 0.25
17 0.023021 0.164479 0.789479 0.023021
18 0.148021 0.414479 0.414479 0.023021
19 0.023021 0.414479 0.414479 0.148021
20 0.148021 0.664479 0.164479 0.023021
21 0 0 1 0
22 0 0 1 0
23 0.125 0.375 0.5 0
24 0.75 0.25 0 0 |