Bicluster 323 (zzz

GENES 2885:::H37Rv..7H9.roll.replicate.1 2885:::Strain.9802501..replicate.2 4060:::H37Rv.0.05..SDS.exposure.for.1h.rep.3 4060:::H37Rv.0.05..SDS.exposure.for.1h.rep.5 4060:::H37Rv.sigE.null.0.05..SDS.exposure.for.1h.rep.5 4062:::MTB.strain.1254.Ctrl.vs.0.005.mM.DETA.NO.40min.rep.1 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.5min.rep.3 4062:::MTB.strain.1254.Ctrl.vs.high.aeration...0.001.mM.DETA.NO.rep.1 4062:::MTB.strain.1254.Ctrl.vs.high.aeration...0.005.mM.DETA.NO.rep.3 4062:::MTB.strain.1254.Ctrl.vs.low.aeration...0.01.mM.DETA.NO.rep.1 4062:::MTB1254.Day.0.rep.3 4068:::H37Rv.delta.mprAB.mutant.vs..H37Rv.delta.mprAB.mutant.SDS.treated.rep.4 4068:::H37Rv.delta.mprAB.mutant.vs..H37Rv.delta.mprAB.mutant.SDS.treated.rep.6 4068:::H37Rv.SDS.treated.vs..H37Rv.delta.mprAB.mutant.SDS.treated.rep.3 4068:::H37Rv.SDS.treated.vs..H37Rv.delta.mprAB.mutant.SDS.treated.rep.4 4068:::H37Rv.vs..H37Rv.delta.mprAB.mutant.rep.6 4068:::H37Rv.vs..H37Rv.SDS.treated.rep.1 4068:::H37Rv.vs..H37Rv.SDS.treated.rep.2 4068:::H37Rv.vs..H37Rv.SDS.treated.rep.4 4068:::H37Rv.vs..H37Rv.SDS.treated.rep.6 4089:::MTB1254.control.vs..0.5.ug.ml.Streptomycin.for.15.min.rep.3 4089:::MTB1254.control.vs..0.5.ug.ml.Streptomycin.for.15.min.rep.4 4089:::MTB1254.control.vs..0.5.ug.ml.Streptomycin.for.15.min.rep.5 4089:::MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.15.min.rep.2 4089:::MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.2.hr..ref..rep.2 4089:::MTB1254.ethanol.vs..5.0.ug.ml.Tetracyclin.for.30.min.rep.1 4089:::MTB1254.vs..MTB1254.rep5 4089:::MTB1254.vs..MTB1254.rep6 4107:::DIPED.10ug.mL.vs.DMSO.12h.2 4107:::pH5.6vspH6.8..7h. 4107:::Rif.5ug.mL.vsDMSO.2.5h 4107:::X0.12mg.mL.NamvspH5.6..4h. 4107:::X0.1mg.mLTriclosanvsEtOH.6hB 4107:::X0.5uMValinomycinvsDMSO.6h 4107:::X10ug.mL.capreomycinvsEtOH..6h 4107:::X10ug.mL.CapvsEtOH..6h 4107:::X10ug.mL.PA.1vsDMSO..6hA 4107:::X10ug.mL.TetvsEtOH..6h 4107:::X10ug.mL.TetvsEtOH..6hA 4107:::X10uM.ValinomycinvsDMSO..6h 4107:::X1ug.mL..109vsDMSO..6hA 4107:::X1uM.ValinomycinvsDMSO..6h 4107:::X1uM.ValinomycinvsDMSO..6h.B 4107:::X20ug.mLProcept6778vsDMSO.6hA 4107:::X2ug.mL.SMvsEtOH..6hA 4107:::X30ug.mL.RoxvsEtOH..6h 4107:::X30ug.mL.RoxvsEtOH..6hA 4107:::X50ug.mL.RoxvsEtOH..6h 4107:::X50ug.mL.RoxvsEtOH..6hA 4107:::X5ug.mL.CapvsEtOH..6h 4107:::X5ug.mL.CapvsEtOH..6hA 4107:::X5ug.mL.KCN.DMSO..6h..1 4363:::H37Rv.hypoxia.4hr.rep.2 4365:::H37Rv.sigma.H.null.mutant.diamide.1h.rep.4 4396:::Strain.49.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.1 4489:::MTB1254.WT.vs.Rv3662c.3665c.KO.in.7H9OADC.Exp2..OD1.5.1 4523:::H37Rv.wild.type.vs.H37Rv.sigB.null.mutant.rep.1 4575:::Purified.Surfactant.Lipids.2hrs.rep.1 4575:::Whole.Lung.Surfactant.30min.rep.4 4581:::H37Rv.Ctrl.vs.5.ug.ml.garlic.extract.6hrs 4615:::AA_30uM_10.min_06 4615:::AA_30uM_24h_03 4615:::AA_30uM_2h_09 4615:::AA_30uM_30min_05 4615:::AA_30uM_30min_07 4615:::AA_30uM_4h_02 4615:::AA_30uM_4h_04 4615:::AA_30uM_4h_08 4615:::AA_60uM_24h_02 4615:::Acetate.3mM.10m.02 4615:::Acetate.3mM.30m.06 4615:::C2_ceramide_5uM_1h_01 4615:::CK_AA_NA.2h 4615:::CK.4h.for.AA.NA.0.03mM 4615:::CK.AA.2h 4615:::CK.AA0.03.2h.02 4615:::CK.for.AA.Na.4h.2 4615:::CK.for.OA.4h.1 4615:::CK.for.OA.NA..2h 4615:::CK.OA.Na.24h.1 4615:::CK.PA.Na.2h.01 4615:::CK.PA.Na.4h.2 4615:::ETYA_10uM_1h_02 4615:::Glucose_40mM_1h.OA_50uM_10min 4615:::Glycerol_1._10M_01 4615:::L2A_30uM_10min_05 4615:::L2A_30uM_1h_08 4615:::L2A_30uM_30min_04 4615:::L2A_30uM_4h_04 4615:::L2A_30uM_4h_T0_01 4615:::MAPP_5uM_30m_01 4615:::MDA_1254.pMV261_01 4615:::MDA_1254.pMV261_02 4615:::MDA_1254.pMV261_03 4615:::MDA_1254.pMV261_04 4615:::MDA_1254.pMV261.3524_01 4615:::MDA_1254.pMV261.3524_02 4615:::MDA_1254.pMV261.3524_03 4615:::MDG_1254.pMV261_01 4615:::MDG_1254.pMV261.3524_01 4615:::MDG_1254.pMV261.3524_02 4615:::MDG_1254.pMV261.3524_03 4615:::MTB1248_PA50_1h_01 4615:::MTB1254_FA5_10min_04 4615:::MTB1254_FA5_1h_01 4615:::MTB1254_INH_20MIN 4615:::MTB1254_SDS_90MIN_01 4615:::MTB1254_SDS_90MIN_02 4615:::MTB1254_SDS_90MIN_03 4615:::MTB1254_SDS_90MIN_04 4615:::MTB1254.0465.4._SDS_60MIN_01 4615:::MTB1254.0485.1._PA_10m_01 4615:::MTB1254.0485.1._PA_10m_02 4615:::MTB1254.0485.1._PA_12h_01 4615:::MTB1254.0485.1._PA_12h_02 4615:::MTB1254.0485.1._PA_12h_03 4615:::MTB1254.0485.1._PA_12h_04 4615:::MTB1254.0485.1._PA_30m_01 4615:::MTB1254.0485.1._PA_30m_03 4615:::MTB1254.0485.1._PA_4h_01 4615:::MTB1254.0485.1._PA_4h_02 4615:::MTB1254.0485.1._PA_4h_03 4615:::MTB1254.0485.1._PA_4h_04 4615:::MTB1254.3524.1._OA_10min_03 4615:::MTB1254.3524.1._PA_12h_04 4615:::MTB1254.B4.1._OA_30MIN_02 4615:::MTB1254.B4.1._OA_30MIN_03 4615:::MTB1254.B4.1._PA_30MIN_01 4615:::MTB1254.B4.1._PA_30MIN_03 4615:::MTB1254.B4.1._PA_30MIN_04 4615:::MTB1254.B4.1._PA_4h_03 4615:::MTB1254.B4.1._PA_4h_04 4615:::MTB1254.B4.1.Compl._PA_4h_01 4615:::MTB1254.B4.1.Compl._PA_4h_02 4615:::MTB1254.B4.1.Compl._PA_4h_03 4615:::MTB1254TA1_OA.30min_03 4615:::MTB1254TA1_OA.30min_04 4615:::MTB1254whiB4_SDS_90MIN_01 4615:::MTB1254whiB4_SDS_90MIN_02 4615:::MTB1254whiB4_SDS_90MIN_04 4615:::MTB1370_PA50_1h_04 4615:::MTB6548_PA50_1h_01 4615:::MTB6548_PA50_1h_02 4615:::OA_100uM_2h_T0_01 4615:::OA_50uM_10min_08 4615:::OA_50uM_10min.Glu_40mM_20min_01 4615:::OA_50uM_1h_03 4615:::OA_50uM_24h_03 4615:::OA_50uM_2h_04 4615:::OA_50uM_2h..1.5.BSA.10mMGlu._30.min_01 4615:::OA_50uM_2h.0.5.BSA_30min._01 4615:::OA_50uM_2h.1.5..BSA_30min_01 4615:::OA_50uM_30min_03 4615:::OA_50uM_4h_03 4615:::PA_50uM_10.min_02 4615:::PA_50uM_12h_02 4615:::PA_50uM_1h_01 4615:::PA_50uM_1h_07 4615:::PA_50uM_1h_11 4615:::PA_50uM_1h_12 4615:::PA_50uM_24h.PA_100uM_1h_01 4615:::PA_50uM_24h.PA_50uM_1h_01 4615:::PA_50uM_2h_01 4615:::PA_50uM_2h_04 4615:::PA_50uM_30.min_07 4615:::PA_50uM_3d_04 4615:::PA_50uM_3d_06 4615:::PA_50uM_8h_02 4615:::PA_50uM.AA_30uM_2h_01 4615:::PA_50uM.AA_30uM_2h_04 4615:::PA_50uM.OA_10uM_24h_02 4615:::PA_50uM.OA_10uM_2h_04 4615:::PA_50uM.OA_10uM_30min_02 4615:::Rv_Rv3524.1 4615:::Rv_TA_OA30_30mim_01 4615:::Rv_TA_OA30_30mim_03 4615:::Rv.MT106_100503_01 4615:::Rv.MT106_100503_02 4615:::Rv.p0485.2._300uM.PA_4h 4615:::Rv.pMV0481.2. 4615:::SDS_60min_01 4615:::Starvation_OA50_6h_03 4615:::TBD041 4615:::TBD092 4615:::TBD097 4615:::TBD1114 4615:::TBD1267 4615:::TBD1268 4615:::TBD1275 4615:::TBD1277 4615:::TBD425 4615:::TBD816 4615:::TBD817 4615:::TBD818 4615:::TBE056 4615:::TBE057 4615:::TBE059 4615:::TBF466 4615:::Test_ceramide_5uM 4615:::Test.1 4615:::Test.5 4615:::Test.6 4615:::Tet_5ug_30M_01 4615:::WM_1254.whiB4._20d_01 4615:::WM_T0_01 4615:::WT_85.1_OA_10min_01 4615:::WT_85.1_PA_10min_01 4615:::X7H9Cy3.MDGCy5.02 4615:::X7H9MTB1254_SDS_90MIN_01 4615:::X7H9MTB1254.0465.4._SDS_90MIN_01 4630:::H37Rv.wild.type.Cy3.vs.Rv0485.Tn.mutant.Cy5.rep.1 4630:::H37Rv.wild.type.Cy5.vs.Rv0485.Tn.mutant.Cy3..DS..rep.3 4696:::H37Rv.wt.vs.dosS.dosT.null.dosT.complemented.rapid.anaerobic.dormancy.day.6.rep.1 4696:::H37Rv.wt.vs.dosS.dosT.null.rapid.anaerobic.dormancy.day.6.rep.1 4696:::H37Rv.wt.vs.dosS.dosT.null.rapid.anaerobic.dormancy.day.6.rep.3 4696:::H37Rv.wt.vs.dosT.null.rapid.anaerobic.dormancy.day.6.rep.1 4699:::CDC1551.Ctrl.vs.clinical.isolate.1500.03_Beijing.rep.3 4699:::CDC1551.Ctrl.vs.clinical.isolate.1934.03_Beijing.rep.3 4699:::CDC1551.Ctrl.vs.clinical.isolate.2199.99_Uganda.rep.2 4699:::CDC1551.Ctrl.vs.clinical.isolate.4850.03_EAI.rep.2 4699:::CDC1551.Ctrl.vs.clinical.isolate.947.01_EAI.rep.3 4703:::CDC1551.extra.vs.intracellular.in.resting.macrophages.rep.1 4703:::Clinical.isolate.12954.03_Beijing.extra.vs.intracellular.in.resting.macrophages.rep.1 4703:::Clinical.isolate.1500.03_Beijing.extra.vs.intracellular.in.resting.macrophages.rep.1 4703:::Clinical.isolate.1500.03_Beijing.extra.vs.intracellular.in.resting.macrophages.rep.2 4703:::Clinical.isolate.2333.99_Uganda.extra.vs.intracellular.in.resting.macrophages.rep.1 4703:::Clinical.isolate.4130.02_Haarlem.extra.vs.intracellular.in.resting.macrophages.rep.2 4703:::Clinical.isolate.4850.03_EAI.extra.vs.intracellular.in.resting.macrophages.rep.2 4703:::H37Rv.extra.vs.intracellular.in.resting.macrophages.rep.1 4704:::Clinical.isolate.12954.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.2 4704:::Clinical.isolate.1797.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.1 4704:::H37Rv.extra.vs.intracellular.in.activated.macrophages.rep.1 4731:::X10ug.ml.capreomycin.vs.Ethanol..6hrs 4731:::X5ug.ml.Capreomycin.vs.Ethanol.6hrs.A 4731:::X5ug.ml.Rifampicin.vs.DMSO.2.5hrs 4795:::CDC1551.ctrl.vs.10.ug.ml.Thioridazine.2hr.rep.2 4799:::H37Rv.ctrl.vs.1ug.ml.Isoniazid.for.6hrs.rep.3 4802:::H37Rv.ctrl.vs.relE2.overexpression.72.hr.rep.3 4802:::H37Rv.ctrl.vs.relE3.overexpression.72.hr.rep.3 4815:::H37Rv.reaeration.for.4hrs.rep.1 4815:::H37Rv.reaeration.for.4hrs.rep.2 4815:::H37Rv.reaeration.for.4hrs.rep.6 4860:::M..bovis.nadABC.null.nicotinamide.starvation.rep.1 Provvedi_Microbiology2009:::H37Rv.Control.vs.400.ug.ml.vancomycin.for.1.hr.DS.rep.2 RV0427C -0.5 -1.35 0.0143508672229063 -0.0143508672229063 -1.39203412062191 0.319495622909966 2.09447130574311 -0.141998054626652 -0.0354995136566629 0.319495622909966 1.10048492335655 NA -0.0906032363476023 0.392614024172944 NA 0.593954549389838 NA -0.895965337215179 NA -0.976501547301936 0.0674490759476596 -0.674490759476595 -0.303520841764468 0.0674490759476596 0 -0.0337245379738297 -0.168622689869149 -0.708215297450425 0.433601202520668 -0.578134936694224 0.168622689869149 NA 0.120444778477963 -1.61396003160471 -0.192711645564742 -0.746757626563373 0.867202405041337 -3.49289857586094 -2.84249677207994 -2.93885259486231 0.0963558227823707 -3.03520841764468 -3.66152126573009 0.529957025303039 0.698579715172188 -0.9876471835193 -2.28845079108131 -0.843113449345744 -1.39715943034438 -0.216800601260334 -0.433601202520668 0.0240889556955927 0.876207622123801 1.21927175751538 NA -1.2 0 -0.798739057274915 -0.97623662555823 0.90878754961057 0.850444870644403 -0.0293256851946346 1.23167877817465 0.351908222335615 -0.938421926228306 1.43695857453709 0.117302740778538 0.175954111167807 0.733142129865864 1.49560994492636 0.0879770555839037 0.498536648308788 0.175954111167807 1.40763288934246 0.381233907530249 0.733142129865864 1.31965583375856 0.205279796362442 0.557188018698057 0.0293256851946346 0.967747611422941 2.84459146387955 0.0586513703892692 -0.469210963114153 -0.909096241033672 1.02639898181221 -0.527862333503422 -0.64516507428196 -0.263931166751711 0.0879770555839037 0.527862333503422 0.557188018698057 0.527862333503422 0.586513703892691 0.293256851946346 0.586513703892691 0.821119185449768 0.234605481557077 0.527862333503422 0.175954111167807 0.557188018698057 0.175954111167807 0.32258253714098 -0.0293256851946346 0.791793500255134 0.70381644467123 -1.40763288934246 -0.586513703892691 -0.351908222335615 -0.997073296617575 -0.117302740778538 -0.498536648308788 -0.234605481557077 -0.586513703892691 -0.938421926228306 -1.84751816726198 -1.55426131531563 -1.29033014856392 -1.11437603739611 -0.938421926228306 -0.909096241033672 -1.05572466700684 -1.17302740778538 -1.14370172259075 -2.84459146387955 0.117302740778538 0.351908222335615 0.469210963114153 -0.293256851946346 -0.205279796362442 -0.498536648308788 -0.381233907530249 -1.524935630121 -1.23167877817465 -0.674490759476595 -1.20235309298002 -1.05572466700684 -2.75661440829565 -1.29033014856392 -1.14370172259075 -0.791793500255134 -0.557188018698057 -1.08505035220148 -2.19942638959759 -1.90616953765125 -0.469210963114153 -0.909096241033672 1.17302740778538 -1.02639898181221 0.645165074281961 1.81819248206734 1.524935630121 -0.175954111167807 1.11437603739611 1.17302740778538 -0.498536648308788 -1.49560994492636 -0.733142129865864 -1.75954111167807 -0.997073296617575 -0.557188018698057 -0.527862333503422 -1.49560994492636 0.234605481557077 0.0293256851946346 -0.117302740778538 -0.498536648308788 -0.263931166751711 -0.146628425973173 -0.557188018698057 0.674490759476595 -0.293256851946346 -1.49560994492636 -0.293256851946346 -1.26100446336929 0.674490759476595 0.351908222335615 0.351908222335615 0.938421926228306 0.498536648308788 -0.32258253714098 -0.117302740778538 2.19942638959759 0.821119185449768 0.674490759476595 -0.821119185449768 0.674490759476595 -0.117302740778538 0.997073296617575 0.0586513703892692 0.469210963114153 0.439885277919519 0.32258253714098 0.32258253714098 -0.0293256851946346 -0.205279796362442 0.439885277919519 0.791793500255134 0.527862333503422 1.14370172259075 0.791793500255134 0.645165074281961 0.909096241033672 0 0.586513703892691 0.967747611422941 0.527862333503422 3.60705927894005 0.0293256851946346 -0.674490759476595 0.193458589927396 -2.13850171027851 0.322054146416753 -1.4887408655114 0.844632572677899 -0.723102706105539 1.2801559312515 0.812141934879982 -0.536839584073208 0.151416292943725 1.30768616633217 0.49382359175965 -0.614268370237614 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