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[+] Show/hide bicluster #332 rows and columns.
bicluster 332
Mycobacterium tuberculosis H37Rv
14x246
[+] Show/hide bicluster #332 rows (genes).
bicluster 332 genes
Mycobacterium tuberculosis H37Rv
14
[+] Show/hide bicluster #332 rows (short gene names).
bicluster 332 short names
Mycobacterium tuberculosis H37Rv
14
short_name
[+] Show/hide bicluster #332 rows (long gene names).
bicluster 332 long names
Mycobacterium tuberculosis H37Rv
14
long_name
[+] Show/hide bicluster #332 rows (NCBI RefSeq gene IDs).
bicluster 332 NCBI RefSeq IDs
Mycobacterium tuberculosis H37Rv
28
[+] Show/hide bicluster #332 gene upstream sequences.
bicluster 332 upstream sequences
Mycobacterium tuberculosis H37Rv
14
upstream
[+] Show/hide bicluster #332 columns (arrays; conditions).
bicluster 332 arrays
Mycobacterium tuberculosis H37Rv
246
[+] Show/hide bicluster #332 ratios.
bicluster 332 ratios
Mycobacterium tuberculosis H37Rv
14x246
GENES 2867:::H37Ra..Dubos.media.replicate.2 2867:::H37Ra..Sauton.s.media.replicate.1 2867:::H37Rv..Sauton.s.media.replicate.1 2867:::H37Rv..Sauton.s.media.replicate.2 2867:::H37Rv..Sauton.s.media.replicate.3 2867:::H37Rv..Youman.media.replicate.1 2867:::H37Rv..Youman.media.replicate.2 2867:::H37Rv..Youman.media.replicate.3 2885:::H37Ra..7H9.roll.replicate.3 2885:::H37Rv..7H9.roll.replicate.1 2885:::Strain.H37Ra..replicate.4 4055:::H37Rv.Vs.M.bovis.rep4 4060:::H37Rv.sigE.null.0.05..SDS.exposure.for.1h.rep.2 4062:::CDC1551.Ctrl.vs.0.05.mM.DETA.NO.40.min.rep.2 4062:::H37Rv.0.day.ctrl.vs.Rv3132.34.KO.hypoxia.4.day.rep.1 4062:::H37Rv.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.3 4062:::H37Rv.ctrl.vs.Rv3132.34.KO..complemented...0.05.mM.DETA.NO.40min.rep.4 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.KCN.20min...0.05.mM.DETA.NO.40min.rep.1 4062:::MTB.strain.1254.Ctrl.vs.high.aeration...0.01.mM.DETA.NO.rep.2 4062:::MTB.strain.1254.Ctrl.vs.low.aeration...0.01.mM.DETA.NO.rep.3 4068:::H37Rv.delta.mprAB.mutant.vs..H37Rv.delta.mprAB.mutant.SDS.treated.rep.2 4068:::H37Rv.delta.mprAB.mutant.vs..H37Rv.delta.mprAB.mutant.SDS.treated.rep.6 4068:::H37Rv.SDS.treated.vs..H37Rv.delta.mprAB.mutant.SDS.treated.rep.2 4068:::H37Rv.vs..H37Rv.delta.mprAB.mutant.rep.2 4068:::H37Rv.vs..H37Rv.SDS.treated.rep.5 4082:::H37Rv.wild.type.Vs.Rv3676.null.1 4082:::H37Rv.wild.type.Vs.Rv3676.null.3 4082:::Rv3676.null.Vs.H37Rv.wild.type.1 4082:::Rv3676.null.Vs.H37Rv.wild.type.3 4084:::High.iron.wt.vs.high.iron.ideR.Complement.1b 4084:::High.iron.wt.vs.high.iron.ideR.Complement.2a 4084:::High.iron.wt.vs.high.iron.ideR.Complement.2b 4084:::High.iron.wt.vs.high.iron.ideR.KO.1a 4084:::High.iron.wt.vs.high.iron.ideR.KO.2a 4084:::High.iron.wt.vs.high.iron.ideR.KO.3a 4089:::H37Rv.wild.type.vs..H37Rv.whiB7.null.rep.3 4089:::MTB1254.control.vs..0.5.ug.ml.Streptomycin.for.15.min.rep.5 4089:::MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.15.min.rep.5 4089:::MTB1254.ethanol.vs..0.5.ug.ml.Erythromycin.for.30.min.rep.3 4089:::MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.2.hr.rep.4 4089:::MTB1254.ethanol.vs..25.ug.ml.Erythromycin.for.30.min.rep.1 4089:::MTB1254.ethanol.vs..5.0.ug.ml.Erythromycin.for.30.min.rep.4 4089:::MTB1254.ethanol.vs..5.0.ug.ml.Tetracyclin.for.15.min.rep.1 4099:::H37.Rv3133c.DosR.mutant.2hr.rep.5 4100:::H37Rv.0.2..Oxygen..2h..6 4101:::H37Rv.Day.0.rep.1 4101:::H37Rv.Day.0.rep.2 4101:::H37Rv.Day.0.rep.3 4101:::NRP.Day10..2 4101:::NRP.Day6..2 4101:::NRP.Day6..3 4107:::PBS.Tw.DMSOvs7H9..6h 4107:::pH5.2vspH6.8..11h. 4107:::Rif.0.5ug.mL.vsDMSO.2.5hA 4107:::X0.05mM.Palmitate.10mM.Gluc..2 4107:::X0.12mg.mL.NamvspH5.6..4h. 4107:::X0.12mg.mL.PZA.pH5.6..4h..2 4107:::X0.15mg.mL.TricvsEtOH..6hA 4107:::X0.1mM.GSNOvsDMSO..4h 4107:::X0.1mM.GSNOvsDMSO..6h.A 4107:::X0.1ug.mL.RifpvsEtOH..6hA 4107:::X0.2mg.mL.TLMvsEtOH..6h 4107:::X0.2mg.mL.TLMvsEtOH..6hA 4107:::X0.2ug.mL.INH.EtOH..6h 4107:::X0.2ug.mL.Mtmvsctrl..1.5h. 4107:::X0.4mM.NaN3vsDMSO..4h.A 4107:::X0.5ug.mL.CeruleninvsDMSO..6hA 4107:::X0.5ug.mL.CervsEtOH..6h 4107:::X0.5ug.mLRifapentinevsEtOH.6h 4107:::X1.ug.mL..111891vsDMSO..6h 4107:::X100ug.mL.Cephalexin.Ctrl..6h 4107:::X100ug.mLCephalexinvsEtOH.6hA 4107:::X10mM.Succinate.10mM.Gluc..2 4107:::X10ug.mL.ClotrimvsEtOH..6hA 4107:::X10ug.mL.TriclosanvsDMSO..6h 4107:::X10ug.mL.TriclosanvsDMSO..6hB 4107:::X10ug.mLMethoxatinvsDMSO.6h 4107:::X2.5mM.Dinitrophenol.DMSO..6h 4107:::X20ug.mLProcept6778vsDMSO.6hA 4107:::X25ug.mL.CPZvsDMSO..6h.A 4107:::X25ug.mL.CPZvsDMSO..6h.B 4107:::X25ug.mLCPZ.0.1mMGSNOvsDMSO.A 4107:::X4ug.mLNaturalcompoundvsDMSO.6h 4107:::X5ug.mLStreptomycinvsEtOH.6h 4107:::X5ug.mLStreptomycinvsEtOH.6hA 4107:::X9ug.mLNaturalproductvsDMSO.6h 4363:::H37Rv.hypoxia.1.day.rep.2 4363:::H37Rv.hypoxia.1.day.rep.3 4363:::H37Rv.hypoxia.1.day.rep.6 4363:::H37Rv.hypoxia.4.day.rep.4 4363:::H37Rv.hypoxia.4.day.rep.7 4365:::H37Rv.sigma.H.null.mutant.diamide.1h.rep.4 4366:::H37Rv.vs.H37.sigma.H.null.mutant.rep.1 4396:::H37Rv.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.2 4396:::Strain.49.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.3 4489:::MTB1254.WT.vs.Rv3662c.3665c.KO.in.7H9OADC.Exp2..OD1.5.1 4523:::H37Rv.wild.type.control.vs.0.05..SDS.for.60.min.rep.4 4523:::H37Rv.wild.type.control.vs.0.05..SDS.for.60.min.rep.5 4570:::MTB.strain.TB294.Ctrl.vs.SigA.overexpression.rep1 4570:::MTB.strain.TB294.Ctrl.vs.SigA.overexpression.rep2 4570:::MTB.strain.TB294.SigA.overexpression.va.Ctrl.DS..rep1 4570:::MTB.strain.TB294.SigA.overexpression.vs.Ctrl..DS..rep2 4575:::Purified.Human.SP.A.Coated.2hrs.rep1 4575:::Purified.Human.SP.A.Coated.2hrs.rep2 4575:::Purified.Surfactant.Lipids.2hrs.rep.1 4583:::X0.2mg.ml.TLM.vs.Ethanol.6hrs.rep.1 4583:::X0.2ug.ml.Isoniazid.vs.Ethanol.6hrs.rep.2 4583:::X130ug.ml.TLM.vs.DMSO.6hrs.rep.2 4583:::X40ug.ml.Ethionamide.vs.Ethanol.6hrs.rep.1 4583:::X40ug.ml.Ethionamide.vs.Ethanol.6hrs.rep.2 4599:::H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.2 4599:::H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.4 4599:::H37Rv.vs.SigE.mutant.24hrs.after.macrophage.infection..DS..rep.1 4599:::H37Rv.vs.SigE.mutant.24hrs.after.macrophage.infection..DS..rep.2 4599:::H37Rv.vs.SigE.mutant.24hrs.after.macrophage.infection.rep.1 4599:::H37Rv.vs.SigE.mutant.24hrs.after.macrophage.infection.rep.3 4599:::H37Rv.wild.type.vs.sigE.mutant.in.7H9.media..DS..rep.3 4599:::H37Rv.wild.type.vs.sigE.mutant.in.7H9.media.rep.1 4599:::H37Rv.wild.type.vs.sigE.mutant.in.RPMI.media.for.2.hrs.rep.1 4599:::SigE.mutant.grown.in.7H9.vs.24hrs.after.infection.in.macrophages..DS..rep.1 4599:::SigE.mutant.grown.in.7H9.vs.24hrs.after.infection.in.macrophages..DS..rep.3 4599:::SigE.mutant.grown.in.7H9.vs.24hrs.after.infection.in.macrophages.rep.1 4599:::SigE.mutant.grown.in.7H9.vs.24hrs.after.infection.in.macrophages.rep.2 4615:::AA_10uM_2h_T0_01 4615:::AA_30uM_2h_03 4615:::AA_30uM_30min_05 4615:::AA_30uM_30min_06 4615:::AA_30uM_4h_05 4615:::AA_30uM_4h_07 4615:::CK.for.AA.NA.2h.2 4615:::CK.for.OA.NA..2h 4615:::ETYA_30uM_10min.03 4615:::Glycerol_1. 4615:::L2A_30uM_10min_01 4615:::L2A_30uM_2h_02 4615:::L2A_30uM_30min_01 4615:::L2A_30uM_30min_02 4615:::L2A_30uM_4h_03 4615:::L2A_30uM_4h_07 4615:::L2A_30uM_4h_T0_01 4615:::MTB1254_Bottom_10D_02 4615:::MTB1254_FA5_1h_01 4615:::MTB1254_Pellicle_10D_04 4615:::MTB1254.0485.1._Act_2h_01 4615:::MTB1254.3219.3._01 4615:::MTB1254.3524.1._OA_10min_02 4615:::MTB1254.3524.1._PA_12h_06 4615:::MTB1254.B4.1.Compl._OA_30MIN_02 4615:::MTB1254.Rv3524.2._PA50.OA30_30m_02 4615:::MTB1254TA1_OA.30min_01 4615:::MTB1254TA1_OA.30min_02 4615:::MTB889_PA50_1h_01 4615:::MTB889_PA50_1h_03 4615:::OA_50uM_1h_01 4615:::OA_50uM_1h_04 4615:::OA_50uM_30min_07 4615:::OA_50uM_4h_02 4615:::OA_50uM_4h_06 4615:::PA_50uM_10min_04 4615:::PA_50uM_1h_02 4615:::PA_50uM_24h_03 4615:::PA_50uM_24h_06 4615:::PA_50uM_2h_05 4615:::PA_50uM_2h_T0_01 4615:::PA_50uM_30.min_06 4615:::PA_50uM_3d_01 4615:::PA_50uM_4h 4615:::PA_50uM_4h_04 4615:::PA_50uM_4h_05 4615:::PA_50uM_4h_T0_01 4615:::PA_50uM_8h_05 4615:::PA_50uM.OA_10uM_2h_03 4615:::PA_50uM.OA_10uM_2h_04 4615:::PA_50uM.OA_10uM_4h_03 4615:::PA_50uM.OA_30uM_2h_03 4615:::PA_50uM.OA_30uM_30min_01 4615:::PA_50uM.OA_30uM_4h_04 4615:::PA_50uM.OA_30uM_4h_05 4615:::Rv.MT71_100603_01 4615:::Rv.MT90_100803_01 4615:::Starvation_1254_24h_02 4615:::Starvation_1254_24h_03 4615:::Starvation_1254_5d_01 4615:::Starvation_1254_6h_02 4615:::Starvation_1254_OA50_12h_04 4615:::Starvation_1254_OA50_24h_02 4615:::Starvation_1254_OA50_24h_04 4615:::Starvation_1254_OA50_3d_01 4615:::Starvation_1254_OA50_3d_03 4615:::Starvation_1254_OA50_6h_02 4615:::Starvation_1254_PA50_24h_01 4615:::Starvation_1254_PA50_24h_02 4615:::Starvation_1254_PA50_24h_03 4615:::Starvation_1254_PA50.OA30_6h_01 4615:::Starvation_1254_PA50.OA30_6h_02 4615:::Starvation_OA50_24h_01 4615:::TBD042 4615:::TBD045 4615:::TBD1111 4615:::TBD426 4615:::TBE059 4615:::Test_361.2 4615:::Test.2 4615:::Tet_100uM_30M_01 4615:::WM_1254_14d_02 4615:::WM_1254.whiB4._10d_01 4615:::WM_1254.whiB4._14d_01 4615:::WM_1254.whiB4._14d_02 4615:::WM_1254.whiB4._20d_01 4615:::X7H9_MTB1254_OA100_10M_01 4630:::H37Rv.wild.type.Cy3.vs.Rv0485.Tn.mutant.Cy5.rep.2 4638:::CDC1551.wild.type.vs.kstR.null.in.1mg.ml.cholesterol.for.24.hrs.rep.3 4696:::H37Rv.wt.vs.dosS.dosT.null.anaerobic.Gaspak.4hr.rep.1 4696:::H37Rv.wt.vs.dosS.dosT.null.anaerobic.Gaspak.4hr.rep.3 4696:::H37Rv.wt.vs.dosS.null.anaerobic.Gaspak.24hr.rep.2 4696:::H37Rv.wt.vs.dosS.null.rapid.anaerobic.dormancy.day.6.rep.1 4696:::H37Rv.wt.vs.dosT.null.anaerobic.Gaspak.4hr.rep.1 4696:::H37Rv.wt.vs.dosT.null.anaerobic.Gaspak24hr.rep.3 4696:::H37Rv.wt.vs.dosT.null.rapid.anaerobic.dormancy.day.6.rep.1 4699:::CDC1551.Ctrl.vs.clinical.isolate.947.01_EAI.rep.2 4703:::Clinical.isolate.1934.03_Beijing.extra.vs.intracellular.in.resting.macrophages.rep.1 4703:::Clinical.isolate.4130.02_Haarlem.extra.vs.intracellular.in.resting.macrophages.rep.2 4704:::Clinical.isolate.10517.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.1 4704:::Clinical.isolate.1500.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.1 4704:::Clinical.isolate.1500.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.2 4704:::Clinical.isolate.1934.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.1 4704:::Clinical.isolate.2333.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.2 4704:::Clinical.isolate.2336.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.1 4704:::Clinical.isolate.5468.02_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.1 4704:::Clinical.isolate.947.01_EAI.extra.vs.intracellular.in.activated.macrophages.rep.1 4704:::Clinical.isolate.9532.03_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.1 4704:::H37Rv.extra.vs.intracellular.in.activated.macrophages.rep.1 4731:::X5ug.ml.Streptomycin.vs.Ethanol.6hrs 4735:::BCG.wild.type.vs.BCG.with.pMFdosR.at.OD.0.2.rep.4 4795:::CDC1551.ctrl.vs.10.ug.ml.Thioridazine.1hr.rep.2 4799:::H37Rv.O2.depleted..ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.3 4802:::H37Rv.ctrl.vs.relE1.overexpression.6.hr.rep.3 4802:::H37Rv.ctrl.vs.relE2.overexpression.72.hr.rep.2 Maciag_JBacteriol2007:::H37Rv.wild.type.vs.H37Rv.FurB.null.rep.4 Provvedi_Microbiology2009:::H37Rv.Control.vs.400.ug.ml.vancomycin.for.1.hr.DS.rep.1 Provvedi_Microbiology2009:::H37Rv.Control.vs.400.ug.ml.vancomycin.for.1.hr.rep.1 Provvedi_Microbiology2009:::H37Rv.Control.vs.subinhibitory.conc..5.ug.ml..vancomycin.DS.rep.1 Rohde_CellHostMicrobe2007:::CDC1551.ctrl..vs.24.hr.after.macrophage.infection Schnappinger_JEM2003:::MTB.in.NOS2.null.macrophages...IFNg.for.24hrs Schnappinger_JEM2003:::MTB.in.Wild.type.macrophages.for.24hrs Schnappinger_JEM2003:::MTB.in.Wild.type.macrophages.for.48hrs
RV1776C -0.782409280992851 0.701470389855659 1.07918521516255 0.458653716444085 0.971266693646297 -0.242816673411574 -0.674490759476595 -0.890327802509106 -0.433601202520668 0.0481779113911854 -0.433601202520668 0 2.8754606061897 0.505868069607446 -1.12415126579433 0.140518908224291 0 -0.393452943028014 -0.393452943028014 -0.786905886056028 NA NA NA NA NA -1.1 -0.7 1.1 0.7 0.35 1.35 1.5 -0.65 -0.55 0 -1.94253338729259 0.269796303790638 -0.404694455685957 0.674490759476595 0.539592607581276 -0.890327802509106 0.35073519492783 0.56657223796034 0.65 0.05 0.301368211681032 0.330069946126844 0.516631220024626 -0.688841626699501 0.129157805006157 0.38747341501847 -1.24678594933552 0.143073797464732 0.286147594929465 NA 0.919760126558994 0.429221392394197 0.327025822776531 -1.53293354426499 -1.88039848096505 0.674490759476595 -0.429221392394197 -0.490538734164797 0.122634683541199 -0.183952025311799 -1.00151658225313 -0.613173417705996 -0.367904050623597 1.10371215187079 -0.858442784788394 -1.20590772148846 -0.143073797464732 NA 0.306586708852998 2.73884126575345 0.143073797464732 -1.75776379742385 0.367904050623597 1.04239481010019 -0.797125443017794 -0.592734303782463 0 1.14459037971786 -0.470099620241263 -0.347464936700064 1.38985974680026 -3.09766126574436 -1.11582421938103 1.39894379743294 0.366390042184817 -0.732780084369634 1.37964018983849 NA 0.2 NA NA -0.354995136566629 -0.461493677536618 NA NA NA NA 0.797125443017794 2.18114544298276 0.00875962025294279 -0.00911473999292697 -0.0273442199787809 1.2851783390027 0.227868499823174 0.154950579879758 NA NA NA NA NA NA NA NA NA NA NA NA NA -0.944287063267233 -0.505868069607446 0.505868069607446 -0.505868069607446 0.0337245379738297 -0.269796303790638 -0.202347227842979 -0.573317145555106 0.944287063267233 -1.04546067718872 NA -1.61877782274383 -1.31525698097936 -0.640766221502765 -0.910562525293404 -0.775664373398085 -0.337245379738298 1.82112505058681 0.0337245379738297 -0.303520841764468 -1.45015513287468 -0.607041683528936 1.98974774045596 1.82112505058681 -0.741939835424255 -0.0337245379738297 0.539592607581276 0.607041683528936 0.573317145555106 0.708215297450425 -1.98974774045596 1.14663429111021 -0.809388911371914 0 -1.9222986645083 1.11290975313638 2.59678942398489 0.573317145555106 5.73317145555106 2.76541211385404 0.101173613921489 0.775664373398084 -1.41643059490085 -0.640766221502765 4.92378254417915 2.29326858222042 NA 0.236071765816808 -0.944287063267233 -1.68622689869149 -0.303520841764468 -1.45015513287468 -0.607041683528936 2.22581950627276 -0.539592607581276 -0.101173613921489 2.05719681640362 1.85484958856064 1.61877782274383 0.978011601241063 1.01173613921489 2.8328611898017 1.07918521516255 1.48387967084851 0.438418993659787 0.708215297450425 0.809388911371914 2.66423849993255 2.02347227842979 0.876837987319574 0 0.978011601241063 -0.741939835424255 0.944287063267233 0.843113449345744 -0.202347227842979 -0.101173613921489 -0.0337245379738297 -0.809388911371914 -1.01173613921489 0.168622689869149 1.34898151895319 2.69796303790638 0.438418993659787 1.07918521516255 4.0806690948334 -0.337245379738298 2.90258383010715 0.653412923242952 -0.404694455685957 1.46312610901846 -0.466955141176104 -0.238665961045564 0 -0.944287063267233 0.674490759476595 1.01996163628168 -0.441484860748317 1.44708926578615 1.68119338556107 -1.88253391077796 -0.231541603999428 -1.8019977006912 1.09730586243207 -1.66105933303938 0.473150234259701 0.936233442258557 -1.74159554312613 -1.84226580573458 -1.48853133125869 -0.216800601260334 NA NA NA NA -0.1464001375 NA NA 0.604737905695039 -1.28497199112726 0 -0.499999999999999 0
RV2015C 0.103767809150246 0.985794186927331 1.55651713725368 0.544780998038788 0.907968330064647 -1.11550394836514 0.622606854901473 -0.441013188888543 NA -0.0539592607581277 NA -0.73694360757628 0.674490759476595 0.327025822776531 -0.817564556941328 0 -0.633612531629529 1.22634683541199 0.0204391139235332 -0.367904050623597 0.488424343069259 1.32572321690227 0.279099624611005 0 0 -0.5 0.3 0.5 -0.3 NA NA NA NA NA NA -2.11982810121216 -1.00210055693666 0.192711645564742 -0.0385423291129483 0.925015898710759 0.154169316451793 0.809388911371914 0.269796303790638 -0.260803093664284 -0.359728405054184 0.726374664051718 1.24521370980294 1.9456464215671 -1.34898151895319 -1.06362004379002 -0.363187332025859 -1.28574801025226 -1.22251450155133 1.09604748414947 -0.927424794280318 1.37005935518683 2.48718467556994 2.48718467556994 -1.05389181168218 -1.81269391609335 -0.969580466747606 -0.653412923242952 -0.168622689869149 -0.843113449345744 -1.24359233778497 -0.674490759476595 -0.548023742074734 -0.674490759476595 -0.358323215971941 -0.484790233373803 -0.505868069607446 -0.653412923242952 -0.126467017401862 -0.800957776878457 1.74946040739242 -0.0843113449345744 -0.126467017401862 5.10083636854175 -0.0632335087009308 -0.105389181168218 -0.906346958046675 -0.463712397140159 -0.168622689869149 -0.484790233373803 -0.252934034803723 0.0210778362336436 0.402820870242966 0.10304719936448 -0.34661330695325 -0.533971851252305 0.365349161383156 -0.0709990273133258 0 1.1 -2.5 NA -0.0963558227823707 -0.770846582258966 -0.541804052694314 -0.807177466258876 1.29369539112724 0.541804052694313 0.930797248077701 1.47038985565898 -1.11965466073115 -0.711962468336406 -0.674490759476595 0.524603924037352 0.112415126579433 -0.112415126579433 -0.0439885277919519 -0.469210963114153 NA 1.29033014856392 -0.791793500255134 NA NA NA 0.762467815060499 0.645165074281961 1.30499299116124 0.234605481557077 -0.234605481557077 -0.432365871459356 -0.363187332025859 1.40086542352831 -0.743669298910092 -0.466955141176104 -0.0172946348583742 0.0518839045751227 -2.19641862701353 0.501544410892853 -1.02038345664408 -2.50772205446426 -0.294008792592362 -0.12106244400862 -0.0518839045751227 -0.985794186927331 -0.501544410892853 -0.0864731742918712 0.743669298910092 -1.19332980522782 -0.709080029193344 -1.53922250239531 0.190240983442117 1.85052592984604 -1.85052592984604 -0.224830253158865 -0.432365871459356 1.6775795812623 2.61148986361451 0.536133680609601 0.155651713725368 0.0864731742918712 1.6084010418288 -2.57690059389776 -0.259419522875614 -0.882026377777086 1.19332980522782 2.99197183049874 0.536133680609601 4.54848896775242 0.259419522875614 -0.12106244400862 1.12415126579433 -1.05497272636083 1.43545469324506 0.985794186927331 0.812847838343589 NA -0.743669298910092 -0.882026377777086 -0.674490759476595 -0.639901489759847 -1.12415126579433 0.432365871459356 2.47313278474752 -0.57072295032635 0.328598062309111 2.92279329106525 0.57072295032635 0.916615647493835 0.916615647493835 0.466955141176104 1.08956199607758 0.847437108060337 0.709080029193344 1.57381177211206 -0.0518839045751227 0.536133680609601 0.328598062309111 0.466955141176104 -0.12106244400862 0.812847838343589 0.674490759476595 -1.33168688409482 1.91970446927954 0.639901489759847 0.259419522875614 -0.0518839045751227 -0.0172946348583742 NA -1.05497272636083 0.605312220043098 0.57072295032635 1.85052592984604 1.36627615381156 1.29709761437807 5.44780998038788 -1.71216885097905 1.11262150922208 0.652964458642236 0.828087665099978 2.95173183850154 -0.227056295269349 -0.88151267575159 -0.146918779291932 -0.0400687579887086 0.28048130592096 0.820326599363427 -1.6808737974258 0.0321186075941236 1.55830623741144 -0.418649436916507 -1.65133944561511 -0.930332082036683 0.255841322560088 0.0465166041018342 0.976848686138517 0.441907738967425 -0.302357926661922 -1.34898151895319 -0.0134898151895319 0 1.04239481010019 0.674490759476595 -0.674490759476595 -0.546016329100101 0 -0.22543900236625 -0.812362293527442 0.194803937782325 0.066 -0.134898151895319 -0.404694455685957 0.134898151895319
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RV2636 NA NA NA NA NA NA NA NA -1.50463323267856 0.397776601742608 -0.57072295032635 0.05 0 -0.768605749171004 -3.05873716506828 0.3607741271619 0.141172484541613 -0.0470574948472043 0.0470574948472043 -2.14895893135566 NA NA NA NA NA -0.495544231452192 -1.07367916814642 0.495544231452192 1.07367916814642 NA 0 0.204391139235332 -1.22634683541199 -1.38985974680026 -1.26722506325906 0.0337245379738297 -0.236071765816808 -0.168622689869149 1.21408336705787 -0.370969917712127 -0.0674490759476595 0.674490759476595 0.134898151895319 0.404694455685956 -2.10994545272166 -0.0221144511303801 -0.176915609043041 0.154801157912661 0.442289022607603 0.0663433533911406 -0.928806947475967 -0.674490759476595 0.139549812305502 0.860557175883932 -0.348874530763756 1.27920661280044 0.721007363578429 -0.209324718458254 -0.348874530763756 -0.0697749061527512 -1.13965680049494 -0.534940947171093 -0.581457551272927 -1.06988189434219 -0.39539113486559 -0.907073779985766 NA 0.441907738967424 1.25594831074952 NA 0.16280811435642 -0.116291510254585 0.16280811435642 -0.55819924922201 2.16302209073529 0.372132832814673 -0.907073779985766 1.13965680049494 0.0232583020509171 0.16280811435642 -0.721007363578429 -0.721007363578429 -0.581457551272927 -0.465166041018342 -0.837298873833015 0.139549812305502 -0.93796371239714 -0.326706461621476 0.832574531228922 0.663951841359773 -0.769341022527991 0.289067468347112 NA -0.366571064932933 -0.425222435322201 NA -0.695308375509824 -0.212339683538928 NA NA NA NA 0.152884572148028 1.87958091640811 -0.602545078465758 0.815663244018208 -0.172544147773082 0 -0.0313716632314696 -0.407831622009104 0 NA NA NA NA NA NA NA NA NA NA NA NA -0.398562721508897 -1.04239481010019 0.551856075935396 -0.674490759476595 -0.459880063279497 -0.275928037967698 NA NA -0.306586708852998 -1.22634683541199 -0.766466772132494 0.551856075935396 -0.950418797444293 -1.07305348098549 -0.245269367082398 -0.674490759476595 0.582514746820696 1.16502949364139 0.153293354426499 -0.582514746820696 -2.23808297462688 0.367904050623597 2.33005898728278 1.59425088603559 -1.62490955692089 -0.245269367082398 1.28766417718259 1.44095753160909 0.429221392394197 1.16502949364139 -1.28766417718259 2.02347227842978 -0.766466772132494 0.398562721508897 -1.04239481010019 NA 0.429221392394197 0.551856075935396 NA 1.68622689869149 0.122634683541199 0.398562721508897 -0.582514746820696 0.122634683541199 1.80886158223269 1.04239481010019 3.58706449358007 0 -1.31832284806789 -0.0919760126558994 -0.613173417705996 -1.47161620249439 -1.28766417718259 3.00454974675938 -0.705149430361895 -0.398562721508897 0.889101455673693 1.41029886072379 0.950418797444293 1.56359221515029 1.04239481010019 1.10371215187079 0.981077468329593 1.25700550629729 1.01173613921489 0.643832088591295 0.950418797444293 0.245269367082398 0.643832088591295 0.827784113903094 1.77820291134739 0.551856075935396 -1.41029886072379 1.68622689869149 -0.122634683541199 -0.705149430361895 0.275928037967698 -0.122634683541199 -0.858442784788394 -0.797125443017794 2.14610696197098 0.674490759476595 2.36071765816808 0.827784113903094 0.398562721508897 5.36526740492746 0.275928037967698 0.930908734153648 0.674490759476595 -1.17081414852541 0.814479407669851 -0.44541842606945 -0.0636312037242071 0.279977296386511 -0.483597148303974 0.292703537131353 -0.240072982186585 -1.58245908954124 1.34898151895319 -0.0198379635140175 -1.42833337300926 0.0198379635140175 -2.10282413248586 0.674490759476595 -1.28946762841114 0.0595138905420525 0.218217598654193 -1.42833337300926 -2.24168987708398 -0.106850021303223 -0.5 NA 0.812141934879982 -0.234006998185758 -0.922262875202691 0 NA NA NA -2.11324335534013 1.01173613921489 -0.674490759476595 -0.674490759476595
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RV3786C NA NA NA NA NA NA NA NA 0.616345004349303 -0.662861608451137 0.0348874530763756 NA -0.16280811435642 0.214610696197099 -2.17676563285628 0.0613173417705996 0.919760126558994 1.96215493665919 -0.919760126558994 NA NA NA NA NA NA NA NA NA NA 1.60191555375691 1.13820315661675 0.927424794280318 -0.29508970727101 0.168622689869149 -0.674490759476595 -0.374717088598108 NA 1.02422670883483 0.524603924037352 0.124905696199369 0 -0.0749434177196217 0.424679367077856 -0.45 -0.15 1.6084010418288 1.89376251699198 2.72390499019394 -0.311303427450736 -0.0518839045751228 -0.466955141176105 -2.81937137461217 0.0944287063267233 0.0404694455685957 -0.148387967084851 1.41643059490085 1.44341022527991 -0.714960205045191 NA -0.930797248077701 -0.741939835424255 -0.687980574666127 -0.768919465803319 0.741939835424255 0.202347227842979 -0.49912316201268 -0.175367597463915 0.0404694455685957 0.445163901254553 0.0674490759476595 -0.49912316201268 -0.0404694455685957 -0.256306488601106 -0.580062053149872 0.28328611898017 -0.310265749359234 -0.741939835424255 2.44165654930527 -0.445163901254553 NA NA NA -0.418184270875489 -0.175367597463915 -0.310265749359234 0.364225010117361 NA NA NA NA NA 0.1 -0.1 0.05 -0.35 NA -1.55651713725368 -0.850896035032013 NA NA NA NA 0.689153602073912 2.0381351210271 -0.54252517610074 -1.54169316451793 -0.674490759476595 -0.337245379738298 -1.58987107590912 -1.6380489873003 NA NA NA NA NA NA NA NA NA NA NA NA NA NA 0.316806265814765 0.623392974667762 -0.378123607585364 -0.398562721508897 -0.398562721508897 NA NA 0.0102195569617666 -1.68622689869149 NA 0.0919760126558994 -0.398562721508897 -0.0102195569617666 -1.40007930376202 -0.99129702529136 -0.521197405050096 -0.337245379738298 0.746027658208961 -1.27744462022082 -1.33876196199142 -1.89061803792682 NA 0.99129702529136 -0.909540569597227 -0.337245379738298 1.52271398730322 1.56359221515029 0.766466772132495 0.705149430361895 0.173732468350032 1.31832284806789 -0.643832088591295 NA -1.54315310122676 0.99129702529136 1.23656639237376 NA NA NA 2.38115677209162 0.439440949355964 -0.623392974667762 0.889101455673694 1.50227487337969 2.56510879740342 NA 0.173732468350032 -0.99129702529136 NA -1.05261436706196 -3.07608664549175 -1.29788373414436 1.99281360754449 -1.03217525313843 1.48183575945616 4.42506816444494 1.15480993667963 1.54315310122676 -0.112415126579433 1.07305348098549 0.459880063279497 0.643832088591295 0.766466772132495 -0.439440949355964 3.50530803788594 0.112415126579433 -0.889101455673694 -0.909540569597227 0.909540569597227 0.296367151891231 0.275928037967698 -1.56359221515029 1.89061803792682 1.62490955692089 -0.746027658208961 -0.357684493661831 0.194171582273565 NA -1.31832284806789 0.0919760126558994 -0.0510977848088329 1.17524905060316 0.235049810120632 0.214610696197099 2.93301284802701 -0.275928037967698 1.02639898181221 0 0.55546297839249 1.3569167043588 0.333277787035494 0.365018528657922 NA -1.22201855246348 1.06331484435134 3.04305133345255 -0.359728405054184 1.13913994933825 0.426718643750499 -1.14250475584811 -1.05991405060608 -1.11497452076743 1.22509546109014 -0.31659770342779 -0.0137651175403387 3.01456074133417 -1.44533734173556 -0.894732640122014 -0.107918521516255 -0.6 2.03752416925221 NA 0.276714157733988 -0.276714157733988 NA -0.792894335471789 NA NA 0.0939536832303017 1.68622689869149 -0.674490759476595 -0.674490759476595
RV3797 NA NA NA NA NA NA NA NA -0.674490759476595 0.381233907530249 -0.117302740778538 -1.16362527970771 0.778258568626841 -0.436435197308385 0.277731489196245 0.813356504074718 0.376921306766333 -1.07125002975695 0 0.932384285158823 3.21186075941236 1.44533734173556 -0.0963558227823704 NA NA -0.296775934169702 -0.674490759476595 0.296775934169702 0.674490759476595 NA NA NA NA NA NA 0.884332329091536 0.0149886835439243 0.974264430355082 0.34473972151026 0.524603924037352 0.374717088598108 0.674490759476595 -0.914309696179385 NA -0.764422860740141 0.106498540969989 -0.24849659559664 0.159747811454983 -0.354995136566629 -0.479243434364949 NA -0.321916044295648 0.352574715180948 0.705149430361895 -0.275928037967698 NA NA 0.321916044295648 NA -0.183952025311799 1.18035882908404 1.04239481010019 0.413892056951547 -0.275928037967698 0.245269367082398 NA 0.689820094919245 0.0613173417705996 0.781796107575145 -0.0919760126558993 -0.705149430361895 -0.352574715180948 -0.214610696197099 -0.0459880063279497 -0.0766466772132495 -0.843113449345744 1.50227487337969 NA 0.904430791116344 NA NA NA 0.107305348098549 1.47161620249439 1.34898151895319 0.643832088591295 NA NA NA NA NA 0.252934034803723 0 0.861052033374377 -1.836911004532 -1.3068258464859 0 -0.481779113911854 NA NA NA NA 0.80131808177134 1.86205568641829 -0.0634136611473722 0.724825890780819 0.614088601911527 0.644289680694061 0.151005393912671 0.181206472695205 NA NA NA NA NA NA NA NA NA NA NA NA NA NA -0.616677265807173 0.250525139234164 NA -0.0770846582258967 -0.385423291129483 -0.55886377213775 NA -0.55886377213775 0 -1.0406428860496 -1.58023549363088 0.385423291129483 -0.23125397467769 -0.809388911371914 -0.327609797460061 -0.404694455685957 0.250525139234164 0.404694455685957 -0.366152126573009 -0.713033088589544 -2.33181091133337 1.23335453161435 0.809388911371914 -0.0385423291129483 1.56096432907441 1.48387967084851 1.59950665818735 -0.46250794935538 1.6380489873003 0.0385423291129482 0.925015898710759 NA NA 0.0578134936694224 1.59950665818735 -0.366152126573009 0.404694455685957 NA NA NA 0.289067468347112 -1.52242199996146 2.08128577209921 2.81359002524523 1.36825268350966 NA 0.385423291129483 -0.366152126573009 -0.269796303790638 -0.501050278468328 -0.308338632903586 -0.0385423291129483 0.597406101250698 0.423965620242431 -0.154169316451793 1.50315083540498 1.42606617717909 1.75367597463915 0.616677265807173 1.54169316451793 0.944287063267233 1.27189686072729 1.02137172149313 1.38752384806614 1.23335453161435 1.67659131641325 0.655219594920121 0.944287063267233 0.481779113911854 0.250525139234164 -0.0385423291129483 -0.55886377213775 1.02137172149313 2.00420111387331 -0.982829392380182 -0.346880962016535 -0.501050278468328 -0.0963558227823707 0.0192711645564742 1.44533734173556 0.115626987338845 2.27399741766395 0.847931240484862 0.963558227823707 2.79431886068875 -0.23125397467769 1.29251252513654 0.57072295032635 2.09031370504458 3.4149892506833 -0.559037386232854 -0.44966050631773 0.352436613059843 0.802097119377573 -0.0972238932578876 0.242816673411574 0.200239444219614 0.853652367462566 1.21408336705787 -0.549969388496301 -1.13106911973767 0.217912399215515 0.383940893855908 -0.965040625097282 1.33860473803817 0.674490759476595 -1.29709761437807 -0.778258568626841 1.46139664553262 -0.565701927302951 NA 1.88857412653447 0.120698346432654 0.560892315775274 -1.41686899352753 0 NA NA 0.514654120860564 0 -0.89932101263546 -0.89932101263546
[+] Show/hide bicluster #332 motif PSSM #1. bicluster 332 motif PSSM #1 Mycobacterium tuberculosis H37Rv 11x4
POSITION A C G T
1 0.181818 0 0.454545 0.363636
2 0.909091 0 0 0.090909
3 0.090909 0 0 0.909091
4 0 0.636364 0 0.363636
5 0.272727 0 0.545455 0.181818
6 0 0.090909 0.363636 0.545455
7 0.181818 0.818182 0 0
8 0.090909 0 0.909091 0
9 0.909091 0 0.090909 0
10 0.727273 0.272727 0 0
11 0 1 0 0 [+] Show/hide bicluster #332 motif PSSM #2. bicluster 332 motif PSSM #2 Mycobacterium tuberculosis H37Rv 9x4
POSITION A C G T
1 0 0 1 0
2 0.090909 0.090909 0.818182 0
3 0 1 0 0
4 0 0.090909 0.909091 0
5 1 0 0 0
6 0.818182 0 0 0.181818
7 0 0.090909 0.727273 0.181818
8 0.272727 0 0.636364 0.090909
9 0 0.818182 0.181818 0 |