Bicluster 337 (zzz

GENES 2867:::H37Ra..7H9.shake.replicate.1 2885:::Strain.1254...replicate.1 2885:::Strain.1843..replicate.1 2885:::Strain.9800608..replicate.4 4060:::H37Rv.0.05..SDS.exposure.for.1h.rep.2 4060:::H37Rv.0.05..SDS.exposure.for.1h.rep.6 4060:::H37Rv.sigE.null.0.05..SDS.exposure.for.1h.rep.1 4060:::H37Rv.sigE.null.0.05..SDS.exposure.for.1h.rep.3 4060:::H37Rv.wild.type.Vs.H37Rv.sigE.null.mutant.rep.2 4060:::H37Rv.wild.type.Vs.H37Rv.sigE.null.mutant.rep.3 4062:::CDC1551.Ctrl.vs.0.05.mM.DETA.NO.40.min.rep.1 4062:::MTB.strain.1254.Ctrl.vs.0.005.mM.DETA.NO.40min.rep.2 4062:::MTB.strain.1254.Ctrl.vs.0.005.mM.DETA.NO.40min.rep.4 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.16hrs.rep.2 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.16hrs.rep.3 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.16hrs.rep.4 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.1hr.rep.1 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.1hr.rep.2 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.1hr.rep.3 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.1hr.rep.4 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.20min.rep.4 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.24hrs...0.5.mM.DNO.40min.rep.4 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.24hrs.rep.3 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.2hrs.rep.1 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.2hrs.rep.2 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.2hrs.rep.3 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.2hrs.rep.4 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.40min.rep.1 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.40min.rep.2 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.8hrs.rep.1 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.8hrs.rep.2 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.8hrs.rep.3 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.8hrs.rep.4 4062:::MTB.strain.1254.Ctrl.vs.1.0.mM.DETA.NO.40min.rep.1 4062:::MTB.strain.1254.Ctrl.vs.1.0.mM.DETA.NO.40min.rep.2 4062:::MTB.strain.1254.Ctrl.vs.1.0.mM.DETA.NO.40min.rep.4 4062:::MTB.strain.1254.Ctrl.vs.high.aeration...0.001.mM.DETA.NO.rep.2 4062:::MTB.strain.1254.Ctrl.vs.high.aeration...0.005.mM.DETA.NO.rep.3 4062:::MTB.strain.1254.Ctrl.vs.high.aeration...0.01.mM.DETA.NO.rep.2 4062:::MTB.strain.1254.Ctrl.vs.high.aeration...0.05.mM.DETA.NO.rep.3 4062:::MTB.strain.1254.Ctrl.vs.high.aeration.rep1 4062:::MTB.strain.1254.Ctrl.vs.high.aeration.rep2 4062:::MTB.strain.1254.Ctrl.vs.high.aeration.rep3 4062:::MTB.strain.1254.Ctrl.vs.low.aeration...0.001.mM.DETA.NO.rep.2 4062:::MTB.strain.1254.Ctrl.vs.low.aeration...0.005.mM.DETA.NO.rep.3 4062:::MTB.strain.1254.Ctrl.vs.low.aeration...0.01.mM.DETA.NO.rep.3 4062:::MTB.strain.1254.Ctrl.vs.low.aeration...0.05.mM.DETA.NO.rep.1 4062:::MTB.strain.1254.Ctrl.vs.low.aeration...0.05.mM.DETA.NO.rep.2 4062:::MTB.strain.1254.Ctrl.vs.low.aeration..0.2..oxygen..2hr.rep.2 4062:::MTB1254.Day.0.rep.1 4062:::MTB1254.Day.0.rep.2 4068:::H37Rv.delta.mprAB.mutant.vs..H37Rv.delta.mprAB.mutant.SDS.treated.rep.2 4068:::H37Rv.delta.mprAB.mutant.vs..H37Rv.delta.mprAB.mutant.SDS.treated.rep.6 4068:::H37Rv.vs..H37Rv.delta.mprAB.mutant.rep.5 4068:::H37Rv.vs..H37Rv.delta.mprAB.mutant.rep.6 4068:::H37Rv.vs..H37Rv.SDS.treated.rep.2 4082:::H37Rv.wild.type.Vs.Rv3676.null.1 4082:::H37Rv.wild.type.Vs.Rv3676.null.4 4082:::Rv3676.null.Vs.H37Rv.wild.type.1 4082:::Rv3676.null.Vs.H37Rv.wild.type.4 4084:::High.iron.wt.vs.high.iron.ideR.Complement.2a 4084:::High.iron.wt.vs.high.iron.ideR.Complement.2b 4084:::High.iron.wt.vs.low.iron.wt.3a 4089:::MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.2.hr..ref..rep.4 4089:::MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.24.hr..ref..rep.1 4089:::MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.24.hr..ref..rep.2 4089:::MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.24.hr..ref..rep.3 4089:::MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.24.hr..ref..rep.4 4089:::MTB1254.control.vs..100.ug.ml.Streptomycin.for.15.min.rep.1 4089:::MTB1254.ethanol.vs..0.5.ug.ml.Tetracyclin.for.30.min.rep.1 4089:::MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.15.min.rep.4 4089:::MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.2.hr.rep.2 4089:::MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.30.min.rep.3 4089:::MTB1254.ethanol.vs..5.0.ug.ml.Tetracyclin.for.15.min.rep.3 4089:::MTB1254.vs..MTB1254.rep3 4099:::H37.Rv3133c.DosR.mutant.2hr.rep.4 4099:::H37.Rv3133c.DosR.mutant.2hr.rep.5 4099:::H37Rv.hypoxia.2hr.rep.6 4101:::H37Rv.Day.0.rep.1 4101:::H37Rv.Day.0.rep.2 4101:::H37Rv.Day.0.rep.3 4101:::H37Rv.Day6.2 4101:::H37Rv.Day60.3 4101:::H37Rv.Day8.2 4101:::NRP.Day8..3 4107:::Palmitate.Glucose..2 4107:::pH4.8vspH6.8..6h. 4107:::pH4.8vspH6.8..7h. 4107:::UV.20J.vs.ctrl.8h.1 4107:::UV.40J.vs.ctrl.8h.1 4107:::X.109..1ug.mL..vs.DMSO..12h..replicate.1..GEO.ac.GSM28051. 4107:::X0.1mg.mL.TriclosanvsEtOH..6h 4107:::X0.1mg.mLTriclosanvsEtOH.6hC 4107:::X0.1mM.GSNOvsDMSO..4h 4107:::X0.1mM.GSNOvsDMSO..6h 4107:::X0.1mM.GSNOvsDMSO..6h.A 4107:::X0.1ug.mL.Mtmvsctrl..1.5h. 4107:::X0.2mg.mL.AmpvsEtOH..6hB 4107:::X0.5ug.mL.CervsEtOH..6hA 4107:::X1.2mg.mL.PZAvspH5.6..10.5h. 4107:::X1.2mg.mL.PZAvspH5.6..7h.A 4107:::X100ug.mL.Cphx.DMSO..6h 4107:::X10ug.mL..109vsDMSO..6h 4107:::X10ug.mL.ClotrimvsEtOH..6hA 4107:::X10ug.mL.LevovsEtOH..6h 4107:::X10ug.mL.LevovsEtOH..6hA 4107:::X10ug.mL.methoxatinvsDMSO..6h.A 4107:::X10ug.mL.OfloxvsDMSO..6hA 4107:::X10ug.mLMethoxatinvsDMSO.6h 4107:::X10uM.CCCP.DMSO..6h 4107:::X2.5mM.Dinitrophenol.DMSO..6h 4107:::X20ug.mL.methoxatinvsDMSO..6h 4107:::X25J.UVvs.ctrl..6h. 4107:::X2mM.DTNBvsDMSO 4107:::X2mMb.mercaptoethanolvsDMSO.6h 4107:::X4mM.H2O2vsctrl..4h.A 4107:::X50ug.mL.RoxvsEtOH..6hA 4107:::X50ug.mL.Triclosan.EtOH 4107:::X5ug.mL.TetvsEtOH..6h 4107:::X60J.UVvsctrl..6h. 4107:::X60ug.mL.ChlorprovsEtOH..6h 4363:::H37Rv.hypoxia.1.day.rep.10 4363:::H37Rv.hypoxia.1.day.rep.2 4363:::H37Rv.hypoxia.1.day.rep.3 4363:::H37Rv.hypoxia.1.day.rep.4 4363:::H37Rv.hypoxia.1.day.rep.5 4363:::H37Rv.hypoxia.1.day.rep.7 4363:::H37Rv.hypoxia.1.day.rep.9 4363:::H37Rv.hypoxia.4.day.rep.3 4363:::H37Rv.hypoxia.4.day.rep.4 4363:::H37Rv.hypoxia.4.day.rep.5 4363:::H37Rv.hypoxia.4.day.rep.7 4363:::H37Rv.hypoxia.4hr.rep.7 4363:::H37Rv.hypoxia.7.day.rep.1 4363:::H37Rv.hypoxia.7.day.rep.3 4363:::H37Rv.hypoxia.7.day.rep.5 4363:::H37Rv.hypoxia.7.day.rep.7 4363:::H37Rv.hypoxia.8hr.rep.2 4364:::H37dosR.mutant.hypoxia.1.day.rep.3 4364:::H37dosR.mutant.hypoxia.1.day.rep.6 4364:::H37dosR.mutant.hypoxia.12hr.rep.4 4364:::H37dosR.mutant.hypoxia.4hr.rep.1 4396:::Strain.32.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.1 4489:::MTB1254.WT.vs.Rv3662c.3665c.KO.in.7H9OADC..OD.1.0.2 4489:::MTB1254.WT.vs.Rv3662c.3665c.KO.in.7H9OADC..OD.1.0.4 4523:::H37Rv.sigB.null.mutant.control.vs.0.05..SDS.for.60.min.rep.1 4523:::H37Rv.sigB.null.mutant.control.vs.0.05..SDS.for.60.min.rep.2 4523:::H37Rv.sigB.null.mutant.control.vs.0.05..SDS.for.60.min.rep.3 4523:::H37Rv.sigB.null.mutant.control.vs.5mM.Diamide.for.60.min.rep.3 4523:::H37Rv.wild.type.control.vs.5mM.Diamide.for.60.min.rep.1 4523:::H37Rv.wild.type.vs.H37Rv.sigB.null.mutant.rep.2 4523:::H37Rv.wild.type.vs.H37Rv.sigB.null.mutant.rep.3 4523:::H37Rv.wild.type.vs.H37Rv.sigB.null.mutant.rep.4 4523:::H37Rv.wild.type.vs.H37Rv.sigB.null.mutant.rep.6 4523:::H37Rv.wild.type.Vs.H37Rv.wild.type.rep.1 4523:::H37Rv.wild.type.Vs.H37Rv.wild.type.rep.6 4570:::MTB.strain.TB294.Ctrl.vs.SigA.overexpression.rep2 4570:::MTB.strain.TB294.SigA.overexpression.va.Ctrl.DS..rep1 4599:::H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.1 4599:::H37Rv.vs.SigE.mutant.24hrs.after.macrophage.infection.rep.2 4599:::H37Rv.wild.type.vs.sigE.mutant.in.7H9.media..DS..rep.1 4599:::H37Rv.wild.type.vs.sigE.mutant.in.7H9.media.rep.2 4599:::H37Rv.wild.type.vs.sigE.mutant.in.RPMI.media.for.2.hrs..DS..rep.3 4599:::SigE.mutant.grown.in.7H9.vs.24hrs.after.infection.in.macrophages.rep.2 4615:::AA_30uM_1h_02 4615:::AA_30uM_1h_07 4615:::AA_30uM_1h_08 4615:::AA_30uM_2h_05 4615:::aceatate.induction.3 4615:::ETYA_30uM_10min.02 4615:::MDA_1254.pMV261_03 4615:::MDA_1254.pMV261.3524_04 4615:::MDG_1254.pMV261_02 4615:::MDG_1254.pMV261_03 4615:::MDG_1254.pMV261_04 4615:::MDG_1254.pMV261.3524_03 4615:::MTB1254_Pellicle_56D_01 4615:::MTB1254.B4.1.Compl._PA_30MIN_04 4615:::MTB1254vsMTB1254B4 4615:::OA_50uM_24h_01 4615:::OA_50uM_24h_04 4615:::OA_50uM_2h_04 4615:::OA_50uM_2h_08 4615:::OA_50uM_30min_07 4615:::PA_50uM_10.min_02 4615:::PA_50uM_10min_05 4615:::PA_50uM_1h_02 4615:::PA_50uM_3d_04 4615:::PA_50uM.OA_10uM_4h_04 4615:::Rv.MT71_100703_01 4615:::Rv.MT96_100503_02 4615:::Starvation_T0 4615:::TBD1137 4615:::TBD426 4615:::TBD663 4615:::TBD664 4615:::TBE283 4615:::WM_1254_10d_01 4615:::WM_1254_10d_02 4615:::WM_1254.whiB4._10d_01 4615:::WM_1254.whiB4._10d_03 4615:::WM_1254.whiB4._14d_01 4615:::WM_1254.whiB4._20d_01 4615:::X7H9_MTB1254.3524.1._OA50_10M_01 4630:::H37Rv.wild.type.Cy5.vs.Rv0485.Tn.mutant.Cy3..DS..rep.1 4637:::H37Rv.control.vs.1mg.ml.cholesterol.for.24.hrs.rep.1 4696:::H37Rv.wt.vs.dosS.null.nitric.oxide.treatment.1hr.rep.2 4696:::H37Rv.wt.vs.dosS.null.nitric.oxide.treatment.1hr.rep.3 4696:::H37Rv.wt.vs.dosT.null.anaerobic.Gaspak24hr.rep.1 4699:::CDC1551.Ctrl.vs.clinical.isolate.10514.01_Afri2.rep.2 4699:::CDC1551.Ctrl.vs.clinical.isolate.10517.01_Afri2.rep.2 4699:::CDC1551.Ctrl.vs.clinical.isolate.10517.01_Afri2.rep.3 4699:::CDC1551.Ctrl.vs.clinical.isolate.2169.99_Uganda.rep.1 4699:::CDC1551.Ctrl.vs.clinical.isolate.2333.99_Uganda.rep.1 4699:::CDC1551.Ctrl.vs.clinical.isolate.4130.02_Haarlem.rep.1 4699:::CDC1551.Ctrl.vs.clinical.isolate.4850.03_EAI.rep.3 4699:::CDC1551.Ctrl.vs.clinical.isolate.947.01_EAI.rep.2 4704:::Clinical.isolate.10514.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.1 4704:::Clinical.isolate.5468.02_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.2 4704:::H37Rv.extra.vs.intracellular.in.activated.macrophages.rep.1 4795:::CDC1551.ctrl.vs.10.ug.ml.Thioridazine.1hr.rep.1 4795:::CDC1551.ctrl.vs.10.ug.ml.Thioridazine.2hr.rep.2 4795:::CDC1551.ctrl.vs.10.ug.ml.Thioridazine.6hr.rep.2 4795:::CDC1551.ctrl.vs.40.ug.ml.Thioridazine.2hr.rep.1 4795:::CDC1551.ctrl.vs.40.ug.ml.Thioridazine.2hr.rep.2 4795:::CDC1551.ctrl.vs.40.ug.ml.Thioridazine.4hr.rep.1 4795:::CDC1551.ctrl.vs.40.ug.ml.Thioridazine.4hr.rep.2 4795:::CDC1551.ctrl.vs.ctrl.at.0.hr.rep.1 4799:::H37Rv.O2.depleted..ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.3 4802:::H37Rv.ctrl.vs.relE2.overexpression.72.hr.rep.4 4802:::H37Rv.ctrl.vs.relE2.overexpression.72.hr.rep.5 4815:::H37Rv.reaeration.for.24hrs.rep.1 4860:::CDC1551.nadABC.null.nicotinamide.starvation.rep.2 4860:::M..bovis.nadABC.null.nicotinamide.starvation.rep.3 Provvedi_Microbiology2009:::H37Rv.Control.vs.400.ug.ml.vancomycin.for.4.hrs.DS.rep.2 Provvedi_Microbiology2009:::H37Rv.Control.vs.subinhibitory.conc..5.ug.ml..vancomycin.rep.2 Rohde_CellHostMicrobe2007:::CDC1551.ctrl..vs.24.hr.after.macrophage.infection RV0846C -1.11799153283107 NA NA NA -0.170475686461118 0.889438364144961 0.696726718580219 0.474367127543979 -0.926498295984334 -0.696726718580219 0.269796303790638 -0.863348172130042 -1.01173613921489 2.91380008093889 3.61527047079455 3.21057601510859 1.13314447592068 2.14488061513557 1.65924726831242 3.75016862268987 0.539592607581276 3.804127883448 2.56306488601106 0.0269796303790637 0.863348172130042 0.350735194927829 1.68622689869149 1.10616484554162 2.61702414676919 0.714960205045191 0.28328611898017 0.687980574666127 1.64575745312289 0.0674490759476594 2.64400377714825 0.822878726561446 -0.445163901254553 -0.188857412653447 -0.323755564548766 0.418184270875489 -0.404694455685957 -0.310265749359234 -1.24106299743694 -0.472143531633617 -1.45690004046945 -0.472143531633617 3.23755564548766 3.06218804802374 -0.256306488601106 -0.795899096182382 -0.768919465803319 NA NA NA NA NA -0.524603924037352 -0.468396360747636 0.524603924037352 0.468396360747636 -0.385423291129483 NA -1.6380489873003 1.14663429111021 0.719456810108368 0.89932101263546 0.854354962003687 0.741939835424255 0.269796303790638 -0.584558658213049 -0.179864202527092 -0.719456810108368 -1.82112505058681 -2.1583704303251 0.539592607581276 -0.809388911371914 0 1.68622689869149 -1.41383639967209 -1.38789444738453 -1.56948811339746 -0.648548807189034 0.0907968330064645 -1.0765910199338 -0.259419522875614 -0.103767809150245 0.0691785394334969 0.605312220043098 -0.760963933768466 -0.44966050631773 -0.44966050631773 -0.0172946348583743 -1.00308882178571 NA -0.795553203485215 -0.0864731742918712 0.224830253158865 -0.588017585184724 -0.432365871459356 0.812847838343589 1.55651713725368 -0.259419522875614 0.536133680609601 -0.57072295032635 -0.57072295032635 -0.224830253158865 -0.830142473201963 1.12415126579433 -0.553428315467976 0.103767809150245 1.08956199607758 -0.709080029193344 -0.138357078866994 -0.380481966884233 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