Bicluster 380 (zzz

GENES 2867:::H37Ra..7H9.roll.replicate.4 2867:::H37Rv..Dubos.media.replicate.4 2885:::Strain.9700665..replicate.3 4055:::H37Rv.Vs.M.bovis.rep1 4062:::H37Rv.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.3 4062:::H37Rv.ctrl.vs.Rv3132.3134.KO..0.05.mM.DETA.NO.40min.rep.4 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.24hrs.rep.1 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.KCN.1hr.rep.2 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.KCN.20min...0.05.mM.DETA.NO.40min.rep.3 4062:::MTB1254.Day.0.rep.2 4062:::MTB1254.Day.0.vs.low.Oxygen.Day.4.rep.1 4068:::H37Rv.delta.mprAB.mutant.vs..H37Rv.delta.mprAB.mutant.SDS.treated.rep.3 4068:::H37Rv.delta.mprAB.mutant.vs..H37Rv.delta.mprAB.mutant.SDS.treated.rep.5 4068:::H37Rv.SDS.treated.vs..H37Rv.delta.mprAB.mutant.SDS.treated.rep.1 4068:::H37Rv.vs..H37Rv.delta.mprAB.mutant.rep.5 4068:::H37Rv.vs..H37Rv.SDS.treated.rep.2 4068:::H37Rv.vs..H37Rv.SDS.treated.rep.3 4068:::H37Rv.vs..H37Rv.SDS.treated.rep.4 4082:::H37Rv.wild.type.Vs.Rv3676.null.3 4082:::Rv3676.null.Vs.H37Rv.wild.type.3 4084:::High.iron.wt.vs.high.iron.ideR.Complement.2b 4084:::High.iron.wt.vs.high.iron.ideR.Complement.3b 4084:::High.iron.wt.vs.high.iron.ideR.KO.2a 4084:::High.iron.wt.vs.high.iron.ideR.KO.3a 4084:::High.iron.wt.vs.low.iron.wt.1b 4089:::H37Rv.wild.type.vs..H37Rv.whiB7.null.with.whiB7.over.expression.rep.2 4089:::MTB1254.control.vs..0.5.ug.ml.Streptomycin.for.15.min.rep.1 4089:::MTB1254.control.vs..0.5.ug.ml.Streptomycin.for.15.min.rep.5 4089:::MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.15.min.rep.4 4089:::MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.2.hr..ref..rep.1 4089:::MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.2.hr..ref..rep.3 4089:::MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.2.hr..ref..rep.4 4089:::MTB1254.control.vs..100.ug.ml.Streptomycin.for.15.min.rep.3 4089:::MTB1254.control.vs..25.ug.ml.Streptomycin.for.15.min.rep.4 4089:::MTB1254.control.vs..5.0.ug.ml.Streptomycin.for.15.min.rep.2 4089:::MTB1254.control.vs..5.0.ug.ml.Streptomycin.for.15.min.rep.3 4089:::MTB1254.ethanol.vs..0.5.ug.ml.Erythromycin.for.15.min.rep.4 4089:::MTB1254.ethanol.vs..0.5.ug.ml.Tetracyclin.for.15.min.rep.4 4089:::MTB1254.ethanol.vs..0.5.ug.ml.Tetracyclin.for.30.min.rep.3 4089:::MTB1254.ethanol.vs..1.0.ug.ml.Erythromycin.for.30.min.rep.2 4089:::MTB1254.ethanol.vs..1.0.ug.ml.Erythromycin.for.30.min.rep.3 4089:::MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.15.min.rep.4 4089:::MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.30.min.rep.1 4089:::MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.30.min.rep.3 4089:::MTB1254.ethanol.vs..100.ug.ml.Erythromycin.for.30.min.rep.4 4089:::MTB1254.ethanol.vs..100.ug.ml.Tetracyclin.for.15.min.rep.1 4089:::MTB1254.ethanol.vs..100.ug.ml.Tetracyclin.for.15.min.rep.3 4089:::MTB1254.ethanol.vs..100.ug.ml.Tetracyclin.for.30.min.rep.2 4089:::MTB1254.ethanol.vs..100.ug.ml.Tetracyclin.for.30.min.rep.3 4089:::MTB1254.ethanol.vs..100.ug.ml.Tetracyclin.for.30.min.rep.4 4089:::MTB1254.ethanol.vs..25.ug.ml.Erythromycin.for.15.min.rep.2 4089:::MTB1254.ethanol.vs..25.ug.ml.Tetracyclin.for.15.min.rep.1 4089:::MTB1254.ethanol.vs..25.ug.ml.Tetracyclin.for.15.min.rep.3 4089:::MTB1254.ethanol.vs..25.ug.ml.Tetracyclin.for.15.min.rep.4 4089:::MTB1254.ethanol.vs..25.ug.ml.Tetracyclin.for.30.min.rep.1 4089:::MTB1254.ethanol.vs..25.ug.ml.Tetracyclin.for.30.min.rep.3 4089:::MTB1254.ethanol.vs..25.ug.ml.Tetracyclin.for.30.min.rep.4 4089:::MTB1254.ethanol.vs..5.0.ug.ml.Erythromycin.for.15.min.rep.3 4089:::MTB1254.ethanol.vs..5.0.ug.ml.Erythromycin.for.30.min.rep.3 4089:::MTB1254.ethanol.vs..5.0.ug.ml.Tetracyclin.for.15.min.rep.1 4089:::MTB1254.ethanol.vs..5.0.ug.ml.Tetracyclin.for.15.min.rep.2 4089:::MTB1254.ethanol.vs..5.0.ug.ml.Tetracyclin.for.15.min.rep.3 4089:::MTB1254.ethanol.vs..5.0.ug.ml.Tetracyclin.for.30.min.rep.1 4089:::MTB1254.ethanol.vs..5.0.ug.ml.Tetracyclin.for.30.min.rep.2 4089:::MTB1254.ethanol.vs..5.0.ug.ml.Tetracyclin.for.30.min.rep.4 4089:::MTB1254.vs..MTB1254.rep1 4089:::MTB1254.vs..MTB1254.rep2 4089:::MTB1254.vs..MTB1254.rep3 4089:::MTB1254.vs..MTB1254.rep4 4089:::MTB1254.vs..MTB1254.rep5 4100:::H37Rv.0.2..Oxygen..2h..4 4101:::H37Rv.Day.0.vs.low.Oxygen.Day.4.rep.1 4101:::H37Rv.Day.0.vs.low.Oxygen.Day.4.rep.2 4101:::H37Rv.Day.0.vs.low.Oxygen.Day.4.rep.4 4101:::H37Rv.Day14.1 4101:::H37Rv.Day60.1 4101:::H37Rv.Day60.2 4101:::H37Rv.Day60.3 4101:::NRP.Day14..7 4101:::NRP.Day20..1 4101:::NRP.Day6..1 4101:::NRP.Day6..3 4101:::NRP.Day8..3 4107:::Palmitate.Glucose..2 4107:::X0.02mM.GSNOvsDMSO..6h 4107:::X0.05mM.Palmitate.10mM.Gluc..1 4107:::X0.12mg.mL.NamvspH5.6..5.5h. 4107:::X0.12mg.mL.PZAvspH5.6..11h. 4107:::X0.12mg.mL.PZAvspH5.6..5.5h. 4107:::X0.1mg.mL.TriclosanvsEtOH..6h 4107:::X0.1mM.GSNOvsDMSO..6h 4107:::X0.2mg.mL.AmpvsEtOH..6h 4107:::X0.2mg.mL.AmpvsEtOH..6hA 4107:::X0.2ug.mL.Mtmvsctrl..4h.A 4107:::X0.2ug.mL.RifvsDMSO..6hA 4107:::X0.5ug.mLRifapentinevsEtOH.6h 4107:::X10ug.mL..109vsDMSO..6h 4107:::X10ug.mL..59vsDMSO..6h 4107:::X10ug.mL..59vsDMSO..6hA 4107:::X10ug.mL.OfloxvsDMSO..6h 4107:::X10ug.mL.OfloxvsDMSO..6hA 4107:::X10ug.mLchlorpromazinevsctrl.6h 4107:::X1ug.mL..121940.DMSO..12h 4107:::X2.5mM.Dinitrophenol.DMSO..6h 4107:::X25J.UV.ctrl..2h. 4107:::X25ug.mL.TRZ.DMSO..6h 4107:::X2ug.mL..111895vsDMSO..6h 4107:::X2ug.mL..111895vsDMSO..6hA 4107:::X2ug.mL..111895vsDMSO..6hB 4107:::X4mM.H2O2.ctrl..2h...1 4107:::X4mM.H2O2.ctrl..2h...2 4107:::X4ug.mLNaturalcompoundvsDMSO.6h 4107:::X5ug.mL.OfloxvsEtOH..6hA 4107:::X5ug.mL.TetvsEtOH..6h 4363:::H37Rv.hypoxia.4hr.rep.4 4396:::H37Rv.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.2 4489:::MTB1254.Opp.KO.complemented.vs.Opp.KO.in.7H9OADC..OD..1.0.1 4489:::MTB1254.Opp.KO.complemented.vs.Opp.KO.in.7H9OADC..OD..1.0.3 4523:::H37Rv.sigB.null.mutant.control.vs.0.05..SDS.for.60.min.rep.6 4523:::H37Rv.wild.type.control.vs.0.05..SDS.for.60.min.rep.4 4523:::H37Rv.wild.type.control.vs.0.05..SDS.for.60.min.rep.5 4575:::Purified.Human.SP.A.Coated.2hrs.rep1 4575:::Purified.Human.SP.A.Uncoated.2hrs.rep3 4575:::Whole.Lung.Surfactant.30min.rep.1 4575:::Whole.Lung.Surfactant.30min.rep.2 4581:::H37Rv.Ctrl.vs.2.ug.ml.garlic.extract.6hrs.rep2 4583:::X0.5ug.mL.Cerulenin.vs.DMSO..6hrs.rep.4 4615:::AA_30uM_10.min_06 4615:::AA_30uM_2h_09 4615:::AA_30uM_30min_07 4615:::AA_3uM_10.min_01 4615:::Acetate.3mM.2h.04 4615:::Acetate.3mM.30m.08 4615:::CHP.AA.4h.1 4615:::CK.AA0.03.2h.02 4615:::CK.for.AA.NA.2h.2 4615:::CK.for.OA.4h.1 4615:::CK.for.OA.NA..2h 4615:::Glycerol_1._10M_01 4615:::L2A_30uM_10min_01 4615:::MTB1254_Bottom_10D_02 4615:::MTB1254_Bottom_42D_01 4615:::MTB1254_Bottom_42D_02 4615:::MTB1254_FA5_10min_03 4615:::MTB1254_FA5_10min_04 4615:::MTB1254.0485.1._OA_10m_03 4615:::MTB1254.0485.1._PA_10m_03 4615:::MTB1254.0485.1._PA_10m_04 4615:::MTB1254.0485.1._PA_30m_04 4615:::MTB1254.B4.1._OA_30MIN_03 4615:::MTB1254.B4.1._PA_10MIN_01 4615:::MTB1254.B4.1._PA_10MIN_02 4615:::MTB1254.B4.1._PA_30MIN_01 4615:::MTB1254.B4.1._PA_30MIN_02 4615:::MTB1254.B4.1._PA_30MIN_03 4615:::MTB1254.Rv3524.2._PA50.OA30_30m_01 4615:::MTB1254.Rv3524.2._PA50.OA30_30m_02 4615:::MTB1254TA1_OA.30min_04 4615:::OA_50uM_10min_07 4615:::OA_50uM_10min_08 4615:::OA_50uM_2h_05 4615:::OA_50uM_2h.1.5..BSA_30min_01 4615:::OA_50uM_30min_03 4615:::OA_50uM_4h_04 4615:::PA_100uM_24h_T0_01 4615:::PA_25uM_2h_T0_01 4615:::PA_5.uM_10min_02 4615:::PA_50uM_10min_T0_01 4615:::PA_50uM_1h_03 4615:::PA_50uM_1h_06 4615:::PA_50uM_1h_07 4615:::PA_50uM_1h_11 4615:::PA_50uM_24h_10 4615:::PA_50uM_24h_T0 4615:::PA_50uM_2h_02 4615:::PA_50uM_2h_08 4615:::PA_50uM_30min_09 4615:::PA_50uM_30min_11 4615:::PA_50uM_4h_01 4615:::PA_50uM_4h_05 4615:::PA_50uM_4h_T0_01 4615:::PA_50uM.AA_30uM_2h_01 4615:::PA_50uM.AA_30uM_2h_04 4615:::PA_50uM.AA_30uM_30min_03 4615:::PA_50uM.OA_10uM_12h_01 4615:::PA_50uM.OA_10uM_30min_01 4615:::PA_50uM.OA_10uM_30min_04 4615:::PA_50uM.OA_30uM_24h_02 4615:::PA_50uM.OA_30uM_30min_01 4615:::PA_50uM.OA_30uM_30min_02 4615:::PA_50uM.OA_30uM_4h_03 4615:::Rv.p0485.1._300uM.PA_10m 4615:::Rv.p0485.2._300uM.PA_4h 4615:::Starvation_1254_24h_03 4615:::Starvation_1254_6h_02 4615:::Starvation_1254_OA50_12h_04 4615:::Starvation_1254_OA50_3d_01 4615:::Starvation_1254_OA50_3d_02 4615:::Starvation_1254_OA50_3d_04 4615:::Starvation_1254_OA50_5d_03 4615:::Starvation_1254_PA50.OA30_24h_04 4615:::TBD042 4615:::TBD043 4615:::TBD098 4615:::TBD099 4615:::TBD1114 4615:::TBD819 4615:::TBE736 4615:::Test.3 4615:::Test.5 4615:::Test.6 4615:::Test.G.OA 4615:::Tet_5ug_30M_01 4615:::WM_1254_10d_02 4615:::WM_1254_14d_01 4615:::WM_1254_vs_1254whiB4_20day 4615:::WM_1254.whiB4._10d_03 4615:::WM_1254.whiB4._20d_01 4615:::X2.BA_500uM_30min_01 4615:::X7H9_MTB1254_OA100_10M_01 4630:::H37Rv.wild.type.Cy3.vs.Rv0485.Tn.mutant.Cy5.rep.1 4630:::H37Rv.wild.type.Cy5.vs.Rv0485.Tn.mutant.Cy3..DS..rep.2 4696:::H37Rv.wt.vs.dosS.dosT.null.anaerobic.Gaspak.4hr.rep.3 4696:::H37Rv.wt.vs.dosS.dosT.null.anaerobic.Gaspak24hr.rep.1 4696:::H37Rv.wt.vs.dosS.null.nitric.oxide.treatment.1hr.rep.1 4699:::CDC1551.Ctrl.vs.clinical.isolate.10514.01_Afri2.rep.2 4699:::CDC1551.Ctrl.vs.clinical.isolate.12954.03_Beijing.rep.1 4699:::CDC1551.Ctrl.vs.clinical.isolate.5468.02_Afri2.rep.3 4703:::Clinical.isolate.4850.03_EAI.extra.vs.intracellular.in.resting.macrophages.rep.1 4703:::Clinical.isolate.5468.02_Afri2.extra.vs.intracellular.in.resting.macrophages.rep.2 4704:::Clinical.isolate.2169.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.2 4704:::Clinical.isolate.2336.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.2 4704:::Clinical.isolate.5468.02_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.2 4704:::Clinical.isolate.947.01_EAI.extra.vs.intracellular.in.activated.macrophages.rep.2 4729:::H37Rv.wild.type.vs.PepD.null.mutant.rep.1 4735:::H37Rv.dosR.KO.vs.BCG.with.pMFdosR.at.OD.0.4.rep.1 4795:::CDC1551.ctrl.vs.10.ug.ml.Thioridazine.1hr.rep.1 4802:::H37Rv.ctrl.vs.relE3.overexpression.6.hr.rep.4 4815:::H37Rv.reaeration.for.12hrs.rep.2 Maciag_JBacteriol2007:::H37Rv.wild.type.vs.H37Rv.FurB.null.rep.3 Provvedi_Microbiology2009:::H37Rv.Control.vs.400.ug.ml.vancomycin.for.4.hrs.DS.rep.2 Schnappinger_JEM2003:::MTB.in.NOS2.null.macrophages...IFNg.for.24hrs Schnappinger_JEM2003:::MTB.in.Wild.type.macrophages.for.4hrs RV0114 0.0266246352424972 1.2158583427407 NA -0.969580466747606 -0.261093197216747 -0.217577664347289 -0.413397562259849 0.348124262955662 1.56655918330048 -0.326366496520933 -1.15316162104063 NA NA NA NA NA NA NA NA NA 0.905237598244904 0.905237598244904 -1.18923370749821 -1.01173613921489 0.834238570931578 0.277731489196245 0.700941377495285 0.251280871177555 0.198379635140175 0.489336433345765 0.515787051364455 3.45180565143905 NA 0.383533961271005 1.07125002975695 0.489336433345765 2.261527840598 -1.49445991805599 -0.198379635140175 1.75896609824289 -0.171929017121485 -1.78541671626158 -1.86476857031765 -0.171929017121485 -1.01834879371957 -0.806743849570045 -0.833194467588735 -1.22995373786909 -0.886095703626115 -3.21375008927084 1.62671300814944 -0.251280871177555 -1.91766980635503 -1.49445991805599 -2.92279329106525 -1.94412042437372 -3.24020070728953 0.886095703626115 0.277731489196245 -0.145478399102795 -1.49445991805599 -0.409984579289695 -1.7325154802242 -1.01834879371957 -1.09770064777564 1.65316362616813 -0.145478399102795 1.33575620994385 0.224830253158865 -0.409984579289695 -0.2 -0.460627835740114 -0.279666900270783 0 NA 1.11866760108313 1.77670736642615 1.16802058348386 NA 0.707392747743746 -0.559333800541567 -0.855451694945926 -1.72735438402543 -0.457690158216261 -1.80667167716945 NA 0.794935537954559 0.0240889556955926 0.433601202520668 0.529957025303039 0.072266867086778 -1.01173613921489 -0.819024493650151 -0.385423291129483 1.68622689869149 1.6380489873003 0.674490759476595 1.18035882908404 0.674490759476595 -0.891291360736929 -1.49351525312675 -0.120444778477964 -0.433601202520668 0.144533734173556 0 2.60160721512401 1.73440481008267 1.10809196199726 1.13218091769286 0.602223892389817 -0.457690158216261 0.578134936694224 -0.0240889556955927 -0.289067468347112 -0.179572215185327 0.890327802509105 -0.192711645564742 -1.87893854425623 NA -0.495949087850438 -0.47611112433642 0.816488814103247 0.0709990273133257 0.585741975334938 -0.674490759476595 0.797125443017795 0.775 NA 1.19667715391009 -1.283708219649 0.174062131477831 -0.500428627998764 -0.761521825215511 -1.21843492034482 0.630975226607138 1.02261502243226 0.718006292346053 -0.239335430782018 -1.54480141686575 -2.52390090642855 1.54480141686575 0.174062131477831 3.35069603094825 1.00085725599753 1.30546598608373 -2.41511207425491 -0.718006292346053 -0.805037358084968 -0.630975226607137 -1.32722375251846 -1.71886354834358 -1.43601258469211 -1.06613055530171 -1.10964608817117 -2.48038537355909 -0.630975226607137 -0.696248525911324 -0.304608730086204 -1.10964608817117 -1.37073928538792 1.15316162104063 0.152304365043102 -0.78327959165024 -0.870310657389155 2.13226111060343 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