Bicluster 397 (zzz

GENES 2867:::H37Rv..7H9.shake.replicate.1 2885:::Strain.9802826..replicate.3 4055:::H37Rv.Vs.M.bovis.rep1 4060:::H37Rv.sigE.null.0.05..SDS.exposure.for.1h.rep.2 4062:::CDC1551.Ctrl.vs.0.05.mM.DETA.NO.40.min.rep.3 4062:::H37Rv.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.1 4062:::H37Rv.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.3 4062:::MTB.strain.1254.Ctrl.vs.0.005.mM.DETA.NO.40min.rep.4 4062:::MTB.strain.1254.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.1 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.1hr.rep.2 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.1hr.rep.3 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.1hr.rep.4 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.20min.rep.3 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.2hrs.rep.2 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.2hrs.rep.4 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.40min.rep.2 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.8hrs.rep.1 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.8hrs.rep.2 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.8hrs.rep.4 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.KCN...2hr.hypoxia.rep.1 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.KCN...2hr.hypoxia.rep.2 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.KCN.1hr.rep.3 4062:::MTB.strain.1254.Ctrl.vs.1.0.mM.DETA.NO.40min.rep.1 4062:::MTB.strain.1254.Ctrl.vs.1.0.mM.DETA.NO.40min.rep.2 4062:::MTB.strain.1254.Ctrl.vs.1.0.mM.DETA.NO.40min.rep.3 4062:::MTB.strain.1254.Ctrl.vs.2hr.Hypoxia.rep.2 4062:::MTB.strain.1254.Ctrl.vs.5.0.mM.DETA.NO.40min.rep.1 4062:::MTB.strain.1254.Ctrl.vs.5.0.mM.DETA.NO.40min.rep.2 4062:::MTB.strain.1254.Ctrl.vs.5.0.mM.DETA.NO.40min.rep.3 4062:::MTB.strain.1254.Ctrl.vs.high.aeration...0.01.mM.DETA.NO.rep.1 4062:::MTB.strain.1254.Ctrl.vs.high.aeration...0.01.mM.DETA.NO.rep.3 4062:::MTB.strain.1254.Ctrl.vs.high.aeration...0.05.mM.DETA.NO.rep.1 4062:::MTB.strain.1254.Ctrl.vs.high.aeration...0.05.mM.DETA.NO.rep.3 4062:::MTB.strain.1254.Ctrl.vs.low.aeration...0.001.mM.DETA.NO.rep.1 4062:::MTB.strain.1254.Ctrl.vs.low.aeration...0.001.mM.DETA.NO.rep.3 4062:::MTB.strain.1254.Ctrl.vs.low.aeration...0.005.mM.DETA.NO.rep.1 4062:::MTB.strain.1254.Ctrl.vs.low.aeration...0.005.mM.DETA.NO.rep.2 4062:::MTB.strain.1254.Ctrl.vs.low.aeration...0.005.mM.DETA.NO.rep.3 4062:::MTB.strain.1254.Ctrl.vs.low.aeration...0.01.mM.DETA.NO.rep.3 4062:::MTB.strain.1254.Ctrl.vs.low.aeration..0.2..oxygen..2hr.rep.2 4062:::MTB1254.Day.0.rep.2 4062:::MTB1254.Day.0.rep.3 4089:::H37Rv.whiB7.null.vs..H37Rv.whiB7.null.with.whiB7.over.expression.rep.4 4089:::H37Rv.wild.type.vs..H37Rv.whiB7.null.rep.3 4089:::MTB1254.ethanol.vs..5.0.ug.ml.Erythromycin.for.30.min.rep.2 4099:::H37.Rv3133c.DosR.mutant.2hr.rep.5 4101:::NRP.Day20..1 4107:::DIPED.50ug.mL.vs.DMSO.12h.2 4107:::EMB..10ug.mL..DMSO..12h 4107:::EMB.10ug.mL.vs.DMSO.12h.2 4107:::H2O2.4mM.vs.ctrl.12h.1 4107:::H2O2.4mM.vs.ctrl.8h.1 4107:::Mtm.0.2ug.mL.vs.ctrl.12h.1 4107:::Mtm.0.2ug.mL.vs.ctrl.8h.1 4107:::Mtm.0.2ug.mL.vs.ctrl.8h.2 4107:::Palmitate.Glucose..2 4107:::pH4.8vspH6.8..11h. 4107:::pH4.8vspH6.8..4h.A 4107:::pH4.8vspH6.8..5.5h. 4107:::pH5.6vspH6.8..5h. 4107:::UV.20J.vs.ctrl.8h.1 4107:::UV.40J.vs.8h.2 4107:::UV.40J.vs.ctrl.8h.1 4107:::UV.60J.vs.ctrl.6h.1 4107:::X.109..0.1ug.mL..vs.DMSO..12h..GEO.acc.GSM28050. 4107:::X.109..10ug.mL..DMSO..12h..replicate.2..GEO.acc..GSM28054. 4107:::X.109..1ug.mL..vs.DMSO..12h..replicate.1..GEO.ac.GSM28051. 4107:::X.109..1ug.mL..vs.DMSO..12h..replicate.2..GEO.acc.GSM28052. 4107:::X.241..0.1ug.mL..DMSO..12h..1..GEO.acc.GSM28046. 4107:::X0.12mg.mL.BZAvspH5.6..11h. 4107:::X0.2mg.mL.AmpvsEtOH..6h 4107:::X0.2mg.mL.AmpvsEtOH..6hB 4107:::X0.2ug.mL.INH.EtOH..6h 4107:::X0.2ug.mL.Mtmvsctrl..4h.A 4107:::X0.32ug.mL.CervsEtOH..6h 4107:::X0.32ug.mL.CervsEtOH..6hA 4107:::X0.4ug.mL.INHvsEtOH..6hA 4107:::X0.4ug.mL.PA824.DMSO..6h..4 4107:::X0.5ug.mL..111891vsDMSO.6h 4107:::X0.5ug.mL..111891vsDMSO.6hA 4107:::X0.5ug.mL..111895vsDMSO.6h 4107:::X0.5ug.mL..124196vsDMSO..6h 4107:::X0.5ug.mL.CeruleninvsDMSO..6hC 4107:::X0.5ug.mL.CervsEtOH..6hA 4107:::X1.2mg.mL.PZAvspH5.6..7h. 4107:::X100ug.mL.Ceph.DMSO..6h 4107:::X100ug.mLCephalexinvsEtOH.6h 4107:::X100ug.mLCephalexinvsEtOH.6hA 4107:::X10mM.Succinate.10mM.Gluc..1 4107:::X10ug.mL.ChlorprovsEtOH..6h 4107:::X10ug.mL.EMBvsDMSO..6h 4107:::X10ug.mL.EMBvsDMSO..6hA 4107:::X10ug.mL.Nvb.DMSO..6h..3 4107:::X10ug.mL.OfloxvsDMSO..6h 4107:::X10ug.mL.TriclosanvsDMSO..6h 4107:::X10ug.mL.TriclosanvsDMSO..6hA 4107:::X10ug.mL.TriclosanvsDMSO..6hC 4107:::X10ug.mL.TRZ.DMSO..6h..1 4107:::X10ug.mLchlorpromazinevsctrl.6h 4107:::X12.5ug.mL.AntimycinvsDMSO..6h 4107:::X12ug.mLEthionamidevsEtOH.6h 4107:::X150uM.Deferroxaminevsctrl..6hB 4107:::X1mM.DTNBvsDMSO..6h 4107:::X1ug.mL..109vsDMSO..6h 4107:::X200uM.Dipyridylvsctrl..6hA 4107:::X20mJ.UVvsctrl..6h. 4107:::X20ug.mL.chlorprmz.DMSO..6h..2 4107:::X20ug.mL.CPZvsDMSO..6h 4107:::X20ug.mL.Prcp.6776.DMSO..6h..1 4107:::X20ug.mLProcept6778vsDMSO.6hA 4107:::X20ug.mLProcept6778vsDMSO.6hB 4107:::X250uM.DeferroxaminevsDMSO..6h 4107:::X25J.UVvs.ctrl..6h. 4107:::X25ug.mL.CPZvsDMSO..6h.A 4107:::X25ug.mLCPZ.0.1mMGSNO.DMSO..1 4107:::X2mM.DTNBvsDMSO 4107:::X2mM.DTTvsDMSO..6h 4107:::X2ug.mL..111895vsDMSO..6h 4107:::X2ug.mL..111895vsDMSO..6hA 4107:::X2ug.mL.PA824.DMSO..6h..1 4107:::X2ug.mL.PA824.DMSO..6h..2 4107:::X2ug.mL.SMvsEtOH..6hA 4107:::X40mJ.UV.ctrl..6h. 4107:::X40ug.mL.EtavsEtOH..6h 4107:::X40ug.mL.EtavsEtOH..6hA 4107:::X40ug.mLProcept6778vsDMSO.6h 4107:::X4ug.mLNaturalcompoundvsDMSO.6h 4107:::X50ug.mL.Triclosan.DMSO..6h 4107:::X50ug.mL.TriclosanvsEtOH..6h 4107:::X50ug.mL.TriclosanvsEtOH..6hA 4107:::X50uM.CCCPvsDMSO..6h 4107:::X5ug.mL.CFZ.0.1mM.GSNO.DMSO..1 4107:::X5ug.mLProcept.6778vsDMSO.6h 4107:::X60J.UV.ctrl..2h. 4107:::X60ug.mL.ChlorprovsEtOH..6h 4107:::X9ug.mLNaturalproductvsDMSO.6h 4363:::H37Rv.hypoxia.4.day.rep.2 4363:::H37Rv.hypoxia.4hr.rep.6 4365:::H37Rv.diamide.1h.rep.1 4396:::Strain.49.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.2 4523:::H37Rv.sigB.null.mutant.control.vs.5mM.Diamide.for.60.min.rep.2 4523:::H37Rv.sigB.null.mutant.control.vs.5mM.Diamide.for.60.min.rep.5 4523:::H37Rv.wild.type.vs.H37Rv.sigB.null.mutant.rep.1 4523:::H37Rv.wild.type.vs.H37Rv.sigB.null.mutant.rep.2 4575:::Purified.Human.SP.A.Coated.2hrs.rep2 4575:::Purified.Surfactant.Lipids.2hrs.rep.2 4575:::Whole.Lung.Surfactant.30min.rep.1 4583:::X0.2ug.ml.PA.824.vs.DMSO.6hrs.rep.1 4583:::X0.32ug.mL.Cerulenin.vs.Ethanol.6hrs.rep.1 4583:::X0.4ug.ml.PA.824.vs.DMSO.6hrs.rep.3 4583:::X0.4ug.ml.PA.824.vs.DMSO.6hrs.rep.4 4583:::X0.5ug.mL.Cerulenin.vs.DMSO..6hrs.rep.1 4583:::X0.5ug.mL.Cerulenin.vs.DMSO..6hrs.rep.3 4583:::X0.5ug.mL.Cerulenin.vs.Ethanol..6hrs.rep.2 4583:::X20ug.ml.KCN.vs.DMSO.6hrs 4583:::X2ug.ml.PA.824.vs.DMSO.6hrs.rep.2 4583:::X40ug.ml.Ethionamide.vs.Ethanol.6hrs.rep.1 4583:::X40ug.ml.Ethionamide.vs.Ethanol.6hrs.rep.2 4599:::H37Rv.grown.in.7H9.vs.H37Rv.24hrs.after.infection.in.macrophages.rep.5 4599:::H37Rv.vs.SigE.mutant.24hrs.after.macrophage.infection..DS..rep.3 4599:::H37Rv.wild.type.vs.sigE.mutant.in.RPMI.media.for.2hrs..DS..rep.1 4615:::AA_30uM_10m_01 4615:::AA_30uM_10min_02 4615:::AA_30uM_24h_04 4615:::AA_30uM_30min_01 4615:::AA_30uM_30min_02 4615:::AA_30uM_30min_07 4615:::AA_30uM_30min_08 4615:::AA_30uM_4h_02 4615:::AA_30uM_4h_04 4615:::AA_60uM_24h_02 4615:::Acetate.3mM.60m.04 4615:::CK.for.MDG.24h.PA.NA 4615:::ETYA_30uM_10min.04 4615:::L2A_30uM_10min_02 4615:::L2A_30uM_1h_02 4615:::L2A_30uM_1h_03 4615:::MTB1254_FA5_1h_01 4615:::MTB1254_Pellicle_21D_01 4615:::MTB1254.3524.1._OA_10min_04 4615:::MTB1254.B4.1._OA_30MIN_04 4615:::MTB1254.B4.1.Compl._OA_30MIN_02 4615:::MTB1254.B4.1.Compl._OA_30MIN_03 4615:::MTB1254vsMTB1254.0494.4. 4615:::MTB1370_PA50_1h_02 4615:::OA_50uM_10min_08 4615:::OA_50uM_1h_07 4615:::OA_50uM_2h.0.5.BSA_30min._01 4615:::OA_50uM_30min_04 4615:::OA_50uM_30min_07 4615:::OA_50uM.0.5.BSA_4h_01 4615:::OA50um_10min.10mM_G_20min 4615:::PA_50uM_10min_05 4615:::PA_50uM_1h_05 4615:::PA_50uM_30min_08 4615:::PA_50uM_3d_01 4615:::PA_50uM.OA_30uM_30min_04 4615:::Rv_OA30_30mim_01 4615:::Rv.MT71_100503_02 4615:::TBD1137 4615:::TBD426 4615:::Test_361.1 4615:::Test_ceramide_5uM 4615:::WT_WhiB4_PA_10min_01 4615:::X7H9_MTB1254.3524.1._OA50_10M_01 4615:::X7H9Cy3.MDGCy5.02 4615:::X7H9Cy3.MDGCy5.03 4630:::H37Rv.wild.type.Cy3.vs.Rv0485.Tn.mutant.Cy5.rep.3 4696:::H37Rv.wt.vs.dosS.dosT.null.anaerobic.Gaspak24hr.rep.3 4696:::H37Rv.wt.vs.dosS.null.anaerobic.Gaspak.24hr.rep.2 4696:::H37Rv.wt.vs.dosT.null.nitric.oxide.treatment.1hr.rep.2 4699:::CDC1551.Ctrl.vs.clinical.isolate.10517.01_Afri2.rep.1 4699:::CDC1551.Ctrl.vs.clinical.isolate.1934.03_Beijing.rep.2 4699:::CDC1551.Ctrl.vs.clinical.isolate.4850.03_EAI.rep.1 4699:::CDC1551.Ctrl.vs.clinical.isolate.4850.03_EAI.rep.3 4699:::CDC1551.Ctrl.vs.clinical.isolate.9532.03_Haarlem.rep.1 4699:::CDC1551.Ctrl.vs.H37Rv.rep.1 4699:::CDC1551.Ctrl.vs.H37Rv.rep.3 4703:::CDC1551.extra.vs.intracellular.in.resting.macrophages.rep.2 4703:::Clinical.isolate.12954.03_Beijing.extra.vs.intracellular.in.resting.macrophages.rep.2 4703:::Clinical.isolate.1934.03_Beijing.extra.vs.intracellular.in.resting.macrophages.rep.2 4731:::X2ug.ml.PA.824.vs.DMSO.6hrs.rep.1 4735:::BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.4.rep.2 4735:::BCG.wild.type.vs.BCG.with.pMFdosR.at.OD.0.2.rep.1 4735:::BCG.wild.type.vs.BCG.with.pMFdosR.at.OD.0.2.rep.3 4735:::BCG.wild.type.vs.BCG.with.pMFdosR.at.OD.0.2.rep.4 4735:::BCG.wild.type.vs.BCG.with.pMFdosR.at.OD.0.2.rep.5 4795:::CDC1551.ctrl.vs.10.ug.ml.Thioridazine.4hr.rep.1 4795:::CDC1551.ctrl.vs.10.ug.ml.Thioridazine.6hr.rep.2 4795:::CDC1551.ctrl.vs.40.ug.ml.Thioridazine.2hr.rep.1 4795:::CDC1551.ctrl.vs.40.ug.ml.Thioridazine.2hr.rep.2 4795:::CDC1551.ctrl.vs.40.ug.ml.Thioridazine.4hr.rep.1 4795:::CDC1551.ctrl.vs.ctrl.at.0.hr.rep.1 4799:::H37Rv.nutrient.starved..ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.2 4802:::H37Rv.ctrl.vs.relE3.overexpression.72.hr.rep.1 4802:::H37Rv.ctrl.vs.relE3.overexpression.72.hr.rep.2 4815:::H37Rv.reaeration.for.4hrs.rep.8 4860:::M..bovis.nadABC.null.nicotinamide.starvation.rep.3 Milano_Tuberculosis2009:::H37Rv.wild.type.vs.H37Rv.Bif1.mutant.rep.1 Provvedi_Microbiology2009:::H37Rv.Control.vs.400.ug.ml.vancomycin.for.1.hr.rep.1 Provvedi_Microbiology2009:::H37Rv.Control.vs.400.ug.ml.vancomycin.for.1.hr.rep.2 Rohde_CellHostMicrobe2007:::CDC1551.5.uM.cytochalasin.D.treatment.for.2hr.in.macrophages.vs.outside.macrophages RV0270 -0.805037358084968 -1.00262139922197 0.53199271169985 0.950418797444293 0 0.0562075632897163 0.196726471514007 -0.224830253158865 -0.44966050631773 1.43329286388776 0 0.533971851252305 -0.168622689869149 1.48950042717748 2.33261387652322 1.71433068033635 NA 0.281037816448581 0.674490759476595 2.24830253158865 2.38882143981294 1.57381177211206 1.18035882908404 1.5457079904672 0.927424794280318 -0.224830253158865 2.27640631323351 1.34898151895319 1.8829533702055 -0.815009667700886 -0.815009667700886 -0.477764287962588 -1.03983992085975 -0.983632357570035 -1.12415126579433 -0.533971851252305 -0.421556724672872 -0.365349161383156 -0.365349161383156 -0.590179414542021 0 0.0562075632897163 -0.790782269731181 -0.697749061527512 0.267470473585546 -1.05991405060608 0.80296518985309 -0.21583704303251 -0.890327802509106 -0.0809388911371914 -0.269796303790638 -0.0539592607581276 -0.782409280992851 0.512612977202212 0.512612977202212 0.404694455685957 0.0539592607581276 -0.56657223796034 0.728450020234723 -0.674490759476595 0.35073519492783 -0.0539592607581276 -0.242816673411574 -0.91730743288817 -0.512612977202212 -0.431674086065021 -0.107918521516255 -0.242816673411574 -0.0539592607581276 1.18710373667881 -0.674490759476595 -0.242816673411574 -0.593551868339404 -0.620531498718468 -1.37596114933225 -1.34898151895319 -0.0269796303790638 3.88506677458519 -0.728450020234723 -0.944287063267233 -0.242816673411574 -0.242816673411574 -0.269796303790638 -0.620531498718468 2.02347227842979 -0.458653716444085 0.107918521516255 0.21583704303251 0.674490759476595 0.728450020234723 -0.296775934169702 -0.134898151895319 2.61702414676919 0.161877782274383 3.04869823283421 2.67098340752732 0.107918521516255 1.21408336705787 -0.0539592607581276 -1.53783893160664 -1.29502225819506 -0.485633346823149 -0.890327802509106 -0.0269796303790638 0 0.323755564548766 1.75367597463915 0.593551868339404 0.35073519492783 -1.18710373667881 -0.944287063267233 -0.296775934169702 0.0269796303790638 2.37420747335762 0.78240928099285 -0.404694455685957 -0.35073519492783 1.67273708350196 2.2393093214623 3.77714825306893 4.20882233913395 0.0809388911371914 -0.512612977202212 -0.755429650613787 -0.35073519492783 2.10441116956698 -0.593551868339404 4.23580196951302 1.72669634426008 0.971266693646297 1.94253338729259 0.21583704303251 -0.323755564548766 0.269796303790638 2.85984082018076 0.296775934169702 0.00661265450467251 0.138865744598123 -1.21408336705787 -0.539592607581276 -0.85 NA 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