Bicluster 403 (zzz

GENES 2867:::H37Rv..7H9.shake.replicate.1 2867:::H37Rv..7H9.shake.replicate.2 2867:::H37Rv..7H9.shake.replicate.4 2867:::H37Rv..Dubos.media.replicate.1 2885:::H37Ra..7H9.roll.replicate.1 2885:::Strain.1006...replicate.2 2885:::Strain.3160..replicate.1 2885:::Strain.9700665..replicate.2 2885:::Strain.9802501..replicate.3 2885:::Strain.9802501..replicate.4 2885:::Strain.CDC1551..replicate.1 2885:::Strain.M3061a..replicate.1 4060:::H37Rv.0.05..SDS.exposure.for.1h.rep.1 4060:::H37Rv.0.05..SDS.exposure.for.1h.rep.4 4060:::H37Rv.sigE.null.0.05..SDS.exposure.for.1h.rep.4 4060:::H37Rv.sigE.null.0.05..SDS.exposure.for.1h.rep.5 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.5min.rep.2 4062:::MTB.strain.1254.Ctrl.vs.5.0.mM.DETA.NO.40min.rep.2 4062:::MTB.strain.1254.Ctrl.vs.low.aeration...0.01.mM.DETA.NO.rep.1 4068:::H37Rv.delta.mprAB.mutant.vs..H37Rv.delta.mprAB.mutant.SDS.treated.rep.1 4068:::H37Rv.SDS.treated.vs..H37Rv.delta.mprAB.mutant.SDS.treated.rep.4 4068:::H37Rv.vs..H37Rv.SDS.treated.rep.3 4068:::H37Rv.vs..H37Rv.SDS.treated.rep.6 4082:::H37Rv.wild.type.Vs.Rv3676.null.2 4082:::H37Rv.wild.type.Vs.Rv3676.null.4 4082:::H37Rv.wild.type.Vs.Rv3676.null.5 4082:::Rv3676.null.Vs.H37Rv.wild.type.2 4082:::Rv3676.null.Vs.H37Rv.wild.type.4 4082:::Rv3676.null.Vs.H37Rv.wild.type.5 4084:::High.iron.wt.vs.high.iron.ideR.KO.2a 4089:::H37Rv.whiB7.null.ethanol.vs..1.0.ug.ml.Tetracyclin.for.15.min.rep.1 4089:::H37Rv.whiB7.null.ethanol.vs..1.0.ug.ml.Tetracyclin.for.15.min.rep.4 4089:::H37Rv.whiB7.null.ethanol.vs..1.0.ug.ml.Tetracyclin.for.2.hr.rep.2 4089:::H37Rv.whiB7.null.ethanol.vs..1.0.ug.ml.Tetracyclin.for.2.hr.rep.3 4089:::H37Rv.wild.type.vs..H37Rv.whiB7.null.rep.4 4089:::H37Rv.wild.type.vs..H37Rv.whiB7.null.rep.6 4089:::H37Rv.wild.type.vs..H37Rv.whiB7.null.with.whiB7.over.expression.rep.6 4089:::MTB1254.control.vs..1.0.ug.ml.Erythromycin.for.24.hr..ref..rep.3 4089:::MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.15.min.rep.1 4089:::MTB1254.control.vs..100.ug.ml.Streptomycin.for.15.min.rep.3 4089:::MTB1254.control.vs..5.0.ug.ml.Streptomycin.for.15.min.rep.2 4089:::MTB1254.ethanol.vs..0.5.ug.ml.Erythromycin.for.15.min.rep.3 4089:::MTB1254.ethanol.vs..25.ug.ml.Erythromycin.for.30.min.rep.2 4089:::MTB1254.ethanol.vs..25.ug.ml.Erythromycin.for.30.min.rep.4 4089:::MTB1254.ethanol.vs..5.0.ug.ml.Tetracyclin.for.15.min.rep.1 4101:::H37Rv.Day.0.rep.1 4101:::H37Rv.Day.0.vs.low.Oxygen.Day.4.rep.2 4101:::H37Rv.Day.0.vs.low.Oxygen.Day.4.rep.3 4101:::NRP.Day10..2 4107:::DIPED.10ug.mL.vs.DMSO.12h.2 4107:::H2O2.4mM.vs.ctrl.8h.1 4107:::Mtm.0.2ug.mL.vs.ctrl.8h.2 4107:::pH4.8vspH6.8..2h.A 4107:::pH5.2vspH6.8..16h. 4107:::pH5.6vspH6.8..16h. 4107:::UV.20J.vs.ctrl.8h.1 4107:::UV.40J.vs.ctrl.8h.1 4107:::UV.60J.vs.ctrl.6h.1 4107:::X0.02mM.GSNOvsDMSO..6h 4107:::X0.12mg.mL.BZA.pH5.6..4h..1 4107:::X0.12mg.mL.BZAvspH5.6..11h. 4107:::X0.12mg.mL.PZA.pH5.6..4h..1 4107:::X0.12mg.mL.PZAvspH5.6..4h. 4107:::X0.12mg.mL.PZAvspH5.6..4h.A 4107:::X0.12mg.mL.PZAvspH5.6..5.5h. 4107:::X0.1mg.mL.TriclosanvsEtOH..6hA 4107:::X0.1mg.mLTriclosanvsEtOH.6hC 4107:::X0.1mMGSNO.10ug.mLmdvsDMSO.6hA 4107:::X0.2ug.mL.Mtmvsctrl..2h.A 4107:::X0.2ug.mL.Mtmvsctrl..4h.B 4107:::X0.2ug.mL.Mtmvsctrl..6h. 4107:::X0.5ug.mL.CervsEtOH..6h 4107:::X100uM.Dipyridylvsctrl..6h 4107:::X10ug.mL..59vsDMSO..6h 4107:::X10ug.mL.Nvb.DMSO..6h..3 4107:::X10ug.mL.OfloxvsDMSO..6hA 4107:::X10ug.mLchlorpromazinevsctrl.6h 4107:::X10ug.mLmnd.Dubos.vsDMSO.6h 4107:::X150uM.Deferroxaminevsctrl..6hB 4107:::X200uM.Dipyridylvsctrl..6h 4107:::X20ug.mL.ethambutol.DMSO 4107:::X20uM.DCCD.DMSO..6h..1 4107:::X24ug.mL.cltrmazole.DMS..6h..1 4107:::X24ug.mL.cltrmazole.DMS..6h..2 4107:::X24ug.mL.cltrmazole.DMS..6h..3 4107:::X24ug.mL.Econazole.DMSO..6h..1 4107:::X24ug.mL.Econazole.DMSO..6h..2 4107:::X25J.UVvs.ctrl..6h. 4107:::X2ug.mL..111891vsDMSO..6h 4107:::X2ug.mL..121940vsDMSO..6h 4107:::X40ug.mL.5CL.pH5.6..4h..1 4107:::X4mM.H2O2vsctrl..2h. 4107:::X4mM.H2O2vsctrl..4h. 4107:::X50uM.NigericinvsDMSO..6h 4107:::X5ug.mL.OfloxvsEtOH..6hA 4107:::X5ug.mLStreptomycinvsEtOH.6hA 4364:::H37dosR.mutant.hypoxia.4hr.rep.2 4365:::H37Rv.diamide.1h.rep.5 4365:::H37Rv.diamide.1h.rep.6 4365:::H37Rv.sigma.H.null.mutant.diamide.1h.rep.3 4365:::H37Rv.sigma.H.null.mutant.diamide.1h.rep.4 4396:::Strain.27.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.1 4396:::Strain.49.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.1 4489:::MTB1254.WT.vs.Rv3662c.3665c.KO.in.7H9OADC..OD.1.0.5 4489:::MTB1254.WT.vs.Rv3662c.3665c.KO.in.7H9OADC..OD.1.0.6 4489:::MTB1254.WT.vs.Rv3662c.3665c.KO.in.7H9OADC.Exp2..OD.0.3.1 4489:::MTB1254.WT.vs.Rv3662c.3665c.KO.in.7H9OADC.Exp2..OD.0.3.4 4489:::MTB1254.WT.vs.Rv3662c.3665c.KO.in.7H9OADC.Exp2..OD1.5.1 4489:::MTB1254.WT.vs.Rv3662c.3665c.KO.in.7H9OADC.Exp2..OD1.5.4 4523:::H37Rv.sigB.null.mutant.control.vs.0.05..SDS.for.60.min.rep.3 4523:::H37Rv.wild.type.control.vs.0.05..SDS.for.60.min.rep.2 4523:::H37Rv.wild.type.control.vs.5mM.Diamide.for.60.min.rep.3 4523:::H37Rv.wild.type.control.vs.5mM.Diamide.for.60.min.rep.4 4523:::H37Rv.wild.type.vs.H37Rv.sigB.null.mutant.rep.5 4523:::H37Rv.wild.type.Vs.H37Rv.wild.type.rep.2 4523:::H37Rv.wild.type.Vs.H37Rv.wild.type.rep.4 4575:::Purified.Human.SP.A.Uncoated.2hrs.rep4 4581:::H37Rv.Ctrl.vs.2.ug.ml.garlic.extract.6hrs.rep.1 4581:::H37Rv.Ctrl.vs.5.ug.ml.garlic.extract.6hrs 4583:::X0.2mg.ml.TLM.vs.Ethanol.6hrs.rep.1 4583:::X0.2mg.ml.TLM.vs.Ethanol.6hrs.rep.2 4583:::X0.2ug.ml.PA.824.vs.DMSO.6hrs.rep.1 4583:::X0.2ug.ml.PA.824.vs.DMSO.6hrs.rep.2 4583:::X0.5ug.mL.Cerulenin.vs.DMSO..6hrs.rep.2 4583:::X0.5ug.mL.Cerulenin.vs.Ethanol..6hrs.rep.1 4583:::X20ug.ml.KCN.vs.DMSO.6hrs 4583:::X40ug.ml.Ethionamide.vs.Ethanol.6hrs.rep.2 4583:::X5ug.ml.KCN.vs.DMSO.6hrs.rep.1 4596:::H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.6 4615:::AA_30uM_10.min_05 4615:::AA_30uM_10min_03 4615:::AA_30uM_24h_04 4615:::AA_30uM_2h_08 4615:::AA_30uM_2h_09 4615:::AA_30uM_30min_05 4615:::AA_30uM_30min_09 4615:::AA_30uM_4h_02 4615:::AA_3uM_10.min_01 4615:::AA_60uM_2h_T0_03 4615:::CK_PA.Na.24h.1 4615:::CK.AA0.03.2h.02 4615:::CK.for.OA.PA.Na.4h 4615:::CK.PA.Na.4h.2 4615:::ETYA_3uM_1h_02 4615:::L2A_30uM_1h_07 4615:::L2A_30uM_2h_05 4615:::L2A_30uM_4h_06 4615:::MDA_1254.pMV261_04 4615:::MTB1254_Bottom_14D_02 4615:::MTB1254_Pellicle_14D_02 4615:::MTB1254_Pellicle_14D_03 4615:::MTB1254_Pellicle_21D_01 4615:::MTB1254_SDS_90MIN_01 4615:::MTB1254_SDS_90MIN_03 4615:::MTB1254_SDS_90MIN_04 4615:::MTB1254.0485.1._OA_10m_02 4615:::MTB1254.0485.1._OA_10m_03 4615:::MTB1254.B4.1._PA_10MIN_01 4615:::MTB1254.B4.1.Compl._PA_30MIN_01 4615:::MTB1254vsMTB1254.0494.4. 4615:::MTB1254whiB4_SDS_90MIN_01 4615:::MTB1254whiB4_SDS_90MIN_03 4615:::MTB1254whiB4_SDS_90MIN_04 4615:::OA_50uM_10min_04 4615:::OA_50uM_1h_02 4615:::OA_50uM_1h_03 4615:::OA_50uM_1h_06 4615:::OA_50uM_2h_01 4615:::OA_50uM_2h_06 4615:::OA_50uM_2h..1.0..BSA.10mMGlu._30.min._01 4615:::OA_50uM_30min_04 4615:::PA_100uM_24h_T0_01 4615:::PA_50uM_10min_05 4615:::PA_50uM_10min_06 4615:::PA_50uM_10min_09 4615:::PA_50uM_12h_01 4615:::PA_50uM_24h_03 4615:::PA_50uM_30min_02 4615:::PA_50uM.OA_10uM_4h_02 4615:::Rv_OA30_30mim_01 4615:::Rv.p0485.1. 4615:::Rv.p0485.1._OK 4615:::SDS_3h_01 4615:::SDS_60min_01 4615:::Starvation_1254_OA50_6h_03 4615:::Starvation_OA50_6h_02 4615:::Starvation_OA50_6h_03 4615:::TBD041 4615:::TBD1111 4615:::TBD426 4615:::TBD817 4615:::TBE734 4615:::Test.3 4615:::WM_1254.whiB4._20d_01 4615:::X2.BA_100uM_30min_01 4630:::H37Rv.wild.type.Cy3.vs.Rv0485.Tn.mutant.Cy5.rep.3 4638:::CDC1551.wild.type.vs.kstR.null.in.1mg.ml.cholesterol.for.24.hrs.rep.2 4638:::CDC1551.wild.type.vs.kstR.null.in.1mg.ml.cholesterol.for.24.hrs.rep.3 4638:::CDC1551.wild.type.vs.kstR.null.rep.2 4696:::H37Rv.wt.vs.dosS.dosT.null.dosT.complemented.rapid.anaerobic.dormancy.day.6.rep.3 4696:::H37Rv.wt.vs.dosS.null.nitric.oxide.treatment.1hr.rep.3 4696:::H37Rv.wt.vs.dosS.null.rapid.anaerobic.dormancy.day.6.rep.2 4699:::CDC1551.Ctrl.vs.clinical.isolate.10517.01_Afri2.rep.3 4699:::CDC1551.Ctrl.vs.clinical.isolate.1500.03_Beijing.rep.1 4699:::CDC1551.Ctrl.vs.clinical.isolate.2169.99_Uganda.rep.3 4699:::CDC1551.Ctrl.vs.clinical.isolate.2333.99_Uganda.rep.3 4699:::CDC1551.Ctrl.vs.clinical.isolate.4130.02_Haarlem.rep.1 4699:::CDC1551.Ctrl.vs.clinical.isolate.4130.02_Haarlem.rep.2 4699:::CDC1551.Ctrl.vs.clinical.isolate.9532.03_Haarlem.rep.3 4699:::CDC1551.Ctrl.vs.H37Rv.rep.1 4703:::Clinical.isolate.10514.01_Afri2.extra.vs.intracellular.in.resting.macrophages.rep.1 4703:::Clinical.isolate.1934.03_Beijing.extra.vs.intracellular.in.resting.macrophages.rep.1 4703:::Clinical.isolate.2169.99_Uganda.extra.vs.intracellular.in.resting.macrophages.rep.2 4703:::H37Rv.extra.vs.intracellular.in.resting.macrophages.rep.1 4704:::Clinical.isolate.1934.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.1 4704:::Clinical.isolate.2191.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.2 4704:::Clinical.isolate.2333.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.1 4704:::Clinical.isolate.2336.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.1 4704:::Clinical.isolate.9532.03_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.2 4729:::H37Rv.wild.type.vs.PepD.null.mutant.rep.1 4729:::H37Rv.wild.type.vs.PepD.null.mutant.rep.3 4731:::X0.2mg.ml.Ampicillin.vs.Ethanol.6hrs 4735:::H37Rv.dosR.KO.vs.BCG.with.pMFdosR.at.OD.0.4.rep.1 4735:::H37Rv.dosR.KO.vs.BCG.with.pMFdosR.at.OD.0.4.rep.4 4795:::CDC1551.ctrl.vs.ctrl.at.0.hr.rep.1 4799:::H37Rv.ctrl.vs.1ug.ml.Isoniazid.for.6hrs.rep.3 4802:::H37Rv.ctrl.vs.relE1.overexpression.6.hr.rep.3 4802:::H37Rv.ctrl.vs.relE2.overexpression.6.hr.rep.2 4802:::H37Rv.ctrl.vs.relE3.overexpression.72.hr.rep.2 4802:::H37Rv.ctrl.vs.relE3.overexpression.72.hr.rep.4 4802:::H37Rv.ctrl.vs.relE3.overexpression.72.hr.rep.5 4815:::H37Rv.reaeration.for.1hrs.rep.8 4815:::H37Rv.reaeration.for.4hrs.rep.2 4815:::H37Rv.reaeration.for.4hrs.rep.4 4815:::H37Rv.reaeration.for.4hrs.rep.6 4815:::H37Rv.reaeration.for.4hrs.rep.8 Provvedi_Microbiology2009:::H37Rv.Control.vs.400.ug.ml.vancomycin.for.1.hr.rep.2 Raghavan_Nature2008:::espR.mutant..R...rep2 Rohde_CellHostMicrobe2007:::CDC1551.in.ctrl.vs.100.nM.Concanamycin.A.treated.macrophages.for.2.hr Rohde_CellHostMicrobe2007:::M..bovis.ctrl..vs.24.hr.after.macrophage.infection RV0438C NA NA NA NA NA NA NA NA NA NA NA NA -0.674490759476595 0.89932101263546 -1.12415126579433 -1.84360807590269 0.760595962814033 -0.530982087247532 1.50684105840516 NA NA 0.05 -1.7 0.743669298910092 -0.155651713725368 0.674490759476595 -0.743669298910092 0.155651713725368 -0.674490759476595 -0.112415126579432 3.58323215971941 2.02347227842979 1.77053824362606 3.11951976257925 -0.337245379738298 -1.55975988128963 -2.06562795089707 -1.05389181168218 0.379401052205585 0.885269121813031 0.0843113449345744 -0.337245379738298 0.0421556724672872 0.632335087009308 1.51760420882234 0.551856075935396 -0.470099620241263 -0.756247215170728 0.83800367086486 0.377714825306893 0.161877782274383 0.458653716444085 0.620531498718468 0.188857412653447 0.809388911371914 NA 0.377714825306893 0.21583704303251 -0.431674086065021 2.34722784297855 0.458653716444085 NA 3.77714825306893 2.80588155942264 0.863348172130042 0.971266693646297 0.0269796303790638 -0.539592607581276 1.13314447592068 1.10616484554162 0.647511129097531 1.07918521516255 1.21408336705787 0 -2.67098340752732 0.0809388911371914 0.674490759476595 -0.323755564548766 0.863348172130042 -2.13139079994604 -0.620531498718468 -2.29326858222042 -1.16012410629974 -2.15837043032511 -0.56657223796034 -0.539592607581276 -1.16012410629974 0.431674086065021 0.107918521516255 -1.53783893160664 1.99649264805072 0.998246324025361 1.91555375691353 0.890327802509106 0.377714825306893 -0.539592607581276 1.02948589604322 -0.824377594915839 -0.711962468336406 1.23656639237376 0.337245379738298 0.840349142954447 -0.928806947475967 NA NA 0.2 0 -3.2 0.05 -1.08956199607758 -0.847437108060337 NA -0.086473174291871 0.674490759476595 NA 0.743669298910092 1.28875912971421 -0.677985530251085 0.782828653485789 0.674490759476595 -0.128474430376494 0 -0.353304683535359 0.224830253158865 1.47745594932968 -4.27177481001844 0.546016329100101 -2.11982810121216 -0.0481779113911854 2.22875207479223 -1.43695857453709 1.64223837089954 NA 0.0293256851946346 1.05572466700684 -1.08505035220148 0.381233907530249 0.879770555839037 0.557188018698057 0.997073296617575 0.879770555839037 0.0586513703892691 2.3753805007654 -0.0879770555839037 2.66863735271175 0.586513703892691 0.469210963114153 0.938421926228306 -1.34898151895319 -0.791793500255134 -0.938421926228306 -0.293256851946346 -2.43403187115467 -2.11144933401369 -1.73021542648344 -0.762467815060499 -2.99121988985273 -0.645165074281961 2.2874034451815 0.586513703892691 -0.527862333503422 -1.524935630121 -1.40763288934246 -0.205279796362442 0.439885277919519 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