Bicluster 433 (zzz

GENES 2867:::H37Rv..7H9.shake.replicate.3 2885:::Strain.9802501..replicate.3 2885:::Strain.9802501..replicate.4 4055:::H37Rv.Vs.M.bovis.rep2 4055:::H37Rv.Vs.M.bovis.rep4 4060:::H37Rv.0.05..SDS.exposure.for.1h.rep.4 4060:::H37Rv.sigE.null.0.05..SDS.exposure.for.1h.rep.6 4062:::H37.Rv3132.34.KO.0.days.vs.Rv3132.34.KO..complemented..hypoxia.4.day.rep.3 4062:::MTB.strain.1254.Ctrl.vs.2hr.Hypoxia.rep.2 4062:::MTB.strain.1254.Ctrl.vs.high.aeration...0.01.mM.DETA.NO.rep.3 4062:::MTB1254.Day.0.vs.low.Oxygen.Day.4.rep.5 4068:::H37Rv.delta.mprAB.mutant.vs..H37Rv.delta.mprAB.mutant.SDS.treated.rep.2 4068:::H37Rv.vs..H37Rv.delta.mprAB.mutant.rep.5 4068:::H37Rv.vs..H37Rv.SDS.treated.rep.4 4089:::MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.24.hr..ref..rep.3 4089:::MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.24.hr..ref..rep.4 4089:::MTB1254.control.vs..100.ug.ml.Streptomycin.for.15.min.rep.1 4089:::MTB1254.ethanol.vs..0.5.ug.ml.Erythromycin.for.30.min.rep.2 4089:::MTB1254.ethanol.vs..0.5.ug.ml.Erythromycin.for.30.min.rep.4 4089:::MTB1254.ethanol.vs..0.5.ug.ml.Tetracyclin.for.15.min.rep.2 4089:::MTB1254.ethanol.vs..0.5.ug.ml.Tetracyclin.for.30.min.rep.1 4089:::MTB1254.ethanol.vs..1.0.ug.ml.Erythromycin.for.30.min.rep.2 4089:::MTB1254.ethanol.vs..5.0.ug.ml.Erythromycin.for.30.min.rep.1 4100:::H37Rv.0.2..Oxygen..2h..2 4101:::NRP.Day14..5 4107:::DIPED..100ug.mL..DMSO..12h..3 4107:::Mtm.0.2ug.mL.vs.ctrl.12h.1 4107:::pH4.8vspH6.8..2h.B 4107:::pH5.6vspH6.8..7h. 4107:::X0.2ug.mL.Mtmvsctrl..2h.B 4107:::X0.32ug.mL.CervsEtOH..6h 4107:::X0.5ug.mL..111895vsDMSO..6h 4107:::X0.5ug.mL.CeruleninvsDMSO..6hB 4107:::X0.5ug.mL.CeruleninvsDMSO..6hC 4107:::X0.5ug.mL.CervsEtOH..6hA 4107:::X100uM.DipyridylvsCtrl..6hA 4107:::X10ug.mL.clotrimvsEtOH..6h 4107:::X10ug.mL.LevovsEtOH..6h 4107:::X10ug.mL.OfloxvsDMSO..6h 4107:::X12.5ug.mL.AntimycinvsDMSO..6h 4107:::X24ug.mL.cltrmazole.DMS..6h..1 4107:::X24ug.mL.cltrmazole.DMS..6h..2 4107:::X2ug.mL..121940vsDMSO..6h 4107:::X2ug.mL..121940vsDMSO..6hA 4107:::X40mJ.UV.ctrl..6h. 4107:::X40ug.mL.5CL.pH5.6..4h..3 4107:::X5ug.mL.OfloxvsEtOH..6h 4107:::X5ug.mL.OfloxvsEtOH..6hA 4363:::H37Rv.hypoxia.1.day.rep.2 4363:::H37Rv.hypoxia.1.day.rep.7 4363:::H37Rv.hypoxia.12hr.rep.2 4363:::H37Rv.hypoxia.4.day.rep.1 4363:::H37Rv.hypoxia.8hr.rep.2 4364:::H37dosR.mutant.hypoxia.1.day.rep.1 4364:::H37dosR.mutant.hypoxia.4hr.rep.4 4365:::H37Rv.diamide.1h.rep.3 4365:::H37Rv.diamide.1h.rep.6 4396:::H37Rv.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.1 4396:::Strain.27.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.1 4396:::Strain.32.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.2 4523:::H37Rv.sigB.null.mutant.control.vs.0.05..SDS.for.60.min.rep.6 4523:::H37Rv.sigB.null.mutant.control.vs.5mM.Diamide.for.60.min.rep.4 4523:::H37Rv.wild.type.control.vs.0.05..SDS.for.60.min.rep.3 4523:::H37Rv.wild.type.control.vs.5mM.Diamide.for.60.min.rep.2 4523:::H37Rv.wild.type.vs.H37Rv.sigB.null.mutant.rep.5 4523:::H37Rv.wild.type.Vs.H37Rv.wild.type.rep.5 4575:::Extracted.Lung.Surfactant.30min.rep.1 4575:::Purified.Human.SP.A.Coated.2hrs.rep1 4575:::Purified.Human.SP.A.Coated.2hrs.rep2 4575:::Purified.Human.SP.A.Uncoated.2hrs.rep1 4575:::Whole.Lung.Surfactant.2hrs.rep.1 4575:::Whole.Lung.Surfactant.30min.rep.3 4575:::Whole.Lung.Surfactant.30min.rep.4 4575:::Whole.Lung.Surfactant.30min.rep.5 4583:::X0.32ug.mL.Cerulenin.vs.Ethanol.6hrs.rep.1 4583:::X0.32ug.mL.Cerulenin.vs.Ethanol.6hrs.rep.2 4583:::X0.5ug.mL.Cerulenin.vs.DMSO..6hrs.rep.2 4583:::X0.5ug.mL.Cerulenin.vs.DMSO..6hrs.rep.3 4583:::X0.5ug.mL.Cerulenin.vs.Ethanol..6hrs.rep.2 4599:::H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.3 4599:::H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.5 4599:::H37Rv.wild.type.vs.sigE.mutant.in.RPMI.media.for.2.hrs.rep.1 4599:::SigE.mutant.grown.in.7H9.vs.24hrs.after.infection.in.macrophages..DS..rep.3 4615:::AA_30uM_10.min_05 4615:::AA_30uM_1h_05 4615:::AA_30uM_1h_07 4615:::AA_30uM_24h_04 4615:::AA_30uM_30min_08 4615:::AA_3uM_10.min_01 4615:::Acetate.3mM.10m.01 4615:::Acetate.3mM.30m.01 4615:::Acetate.3mM.30m.04 4615:::Acetate.3mM.60m.02 4615:::CA_50uM_10min_01 4615:::CK.AA.2h 4615:::CK.AA0.03.2h.02 4615:::CK.for.OA.4h.1 4615:::CK.PA.Na.2h.01 4615:::CK.PA.NA.2h.3..101801 4615:::CK.PA.Na.4h.2 4615:::Glycerol_1._30M_01 4615:::L2A_30uM_10min_04 4615:::L2A_30uM_10min_06 4615:::L2A_30uM_2h_02 4615:::L2A_30uM_2h_04 4615:::L2A_30uM_30min_01 4615:::MAPP_5uM_30m_01 4615:::MAPP_5uM_4h_01 4615:::MTB1254_FA5_10min_04 4615:::MTB1254_INH_20MIN 4615:::MTB1254_Pellicle_42D_01 4615:::MTB1254.0465.4._SDS_60MIN_01 4615:::MTB1254.0485.1._OA_10m_01 4615:::MTB1254.0485.1._OA_10m_02 4615:::MTB1254.0485.1._PA_10m_01 4615:::MTB1254.0485.1._PA_12h_02 4615:::MTB1254.0485.1._PA_30m_02 4615:::MTB1254.0485.1._PA_30m_03 4615:::MTB1254.0485.1._PA_30m_04 4615:::MTB1254.0485.1._PA_4h_03 4615:::MTB1254.3219.1._01 4615:::MTB1254.3524.1._OA_10min_03 4615:::MTB1254.3524.1._PA_12h_05 4615:::MTB1254.3524.2._INH_20MIN 4615:::MTB1254.B4.1._OA_10MIN_02 4615:::MTB1254.B4.1._OA_30MIN_01 4615:::MTB1254.B4.1._OA_30MIN_03 4615:::MTB1254.B4.1._OA_30MIN_04 4615:::MTB1254.B4.1._PA_4h_02 4615:::MTB1254.B4.1._PA_4h_04 4615:::MTB1254.B4.1.Compl._OA_30MIN_01 4615:::MTB1254.B4.1.Compl._OA_30MIN_02 4615:::MTB1254.B4.1.Compl._OA_30MIN_03 4615:::MTB1254.B4.1.Compl._OA_30MIN_04 4615:::MTB1254.Rv3524.2._PA50.OA30_30m_02 4615:::MTB1254TA1_OA.30min_04 4615:::MTB1254whiB4_SDS_90MIN_02 4615:::MTB1254whiB4_SDS_90MIN_03 4615:::MTB1370_PA50_1h_02 4615:::MTB1370_PA50_1h_04 4615:::OA_50uM_1h_01 4615:::OA_50uM_2h_04 4615:::OA_50uM_2h_09 4615:::OA_50uM_2h..1.0..BSA.10mMGlu._30.min._01 4615:::OA_50uM_2h..1.5.BSA.10mMGlu._30.min_01 4615:::OA_50uM_2h.0.5.BSA_30min._01 4615:::OA_50uM_2h.1.5..BSA_30min_01 4615:::OA_50uM_30min_08 4615:::OA_50uM_4h_02 4615:::PA_50uM_10.min_03 4615:::PA_50uM_10min_06 4615:::PA_50uM_10min_10 4615:::PA_50uM_1h_05 4615:::PA_50uM_1h_07 4615:::PA_50uM_24h_08 4615:::PA_50uM_24h.PA_50uM_1h_01 4615:::PA_50uM_2h_01 4615:::PA_50uM_2h_06 4615:::PA_50uM_30.min_04 4615:::PA_50uM.AA_30uM_2h_01 4615:::PA_50uM.OA_10uM_30min_02 4615:::PA_50uM.OA_30uM_24h_02 4615:::Rv_OA30_30mim_03 4615:::Rv_Rv3524.1 4615:::Rv_TA_OA30_30mim_03 4615:::Rv.MT71_100503_01 4615:::Rv.MT90_100503_01 4615:::Rv.MT96_100503_01 4615:::Rv.p0485.1. 4615:::Rv.p0485.1._OK 4615:::Rv.pMV0481.1. 4615:::Rv.pMV0481.2. 4615:::Starvation_1254_5d_02 4615:::TBD044 4615:::TBD094 4615:::TBD097 4615:::TBD1114 4615:::TBD1267 4615:::TBD1268 4615:::TBD1276 4615:::TBD426 4615:::TBD817 4615:::TBE059 4615:::Test_361.3 4615:::Test.6 4615:::Tet_500ng_30M_01 4615:::WT_65.4_SDS_01 4615:::WT_85.1_OA_10min_02 4615:::WT_WhiB4_PA_10min_01 4615:::X7H9_MTB1254_OA100_10M_01 4615:::X7H9_MTB1254.3524.1._OA100_10M_01 4615:::X7H9Cy3.MDGCy5.01 4630:::H37Rv.wild.type.Cy3.vs.Rv0485.Tn.mutant.Cy5.rep.2 4696:::H37Rv.wt.vs.dosS.dosT.null.dosT.complemented.rapid.anaerobic.dormancy.day.6.rep.2 4696:::H37Rv.wt.vs.dosS.null.anaerobic.Gaspak.24hr.rep.1 4696:::H37Rv.wt.vs.dosT.null.rapid.anaerobic.dormancy.day.6.rep.1 4696:::H37Rv.wt.vs.dosT.null.rapid.anaerobic.dormancy.day.6.rep.2 4699:::CDC1551.Ctrl.vs.clinical.isolate.1500.03_Beijing.rep.1 4699:::CDC1551.Ctrl.vs.clinical.isolate.1500.03_Beijing.rep.3 4699:::CDC1551.Ctrl.vs.clinical.isolate.1934.03_Beijing.rep.1 4699:::CDC1551.Ctrl.vs.clinical.isolate.2336.02_Haarlem.rep.1 4699:::CDC1551.Ctrl.vs.clinical.isolate.2336.02_Haarlem.rep.2 4699:::CDC1551.Ctrl.vs.clinical.isolate.4850.03_EAI.rep.2 4699:::CDC1551.Ctrl.vs.clinical.isolate.5468.02_Afri2.rep.3 4699:::CDC1551.Ctrl.vs.clinical.isolate.9532.03_Haarlem.rep.1 4699:::CDC1551.Ctrl.vs.H37Rv.rep.3 4703:::CDC1551.extra.vs.intracellular.in.resting.macrophages.rep.1 4703:::Clinical.isolate.10514.01_Afri2.extra.vs.intracellular.in.resting.macrophages.rep.2 4703:::Clinical.isolate.12954.03_Beijing.extra.vs.intracellular.in.resting.macrophages.rep.1 4703:::Clinical.isolate.12954.03_Beijing.extra.vs.intracellular.in.resting.macrophages.rep.2 4703:::Clinical.isolate.1500.03_Beijing.extra.vs.intracellular.in.resting.macrophages.rep.1 4703:::Clinical.isolate.1934.03_Beijing.extra.vs.intracellular.in.resting.macrophages.rep.1 4703:::Clinical.isolate.2333.99_Uganda.extra.vs.intracellular.in.resting.macrophages.rep.1 4703:::Clinical.isolate.2336.02_Haarlem.extra.vs.intracellular.in.resting.macrophages.rep.1 4703:::Clinical.isolate.2336.02_Haarlem.extra.vs.intracellular.in.resting.macrophages.rep.2 4703:::Clinical.isolate.5468.02_Afri2.extra.vs.intracellular.in.resting.macrophages.rep.1 4703:::Clinical.isolate.5468.02_Afri2.extra.vs.intracellular.in.resting.macrophages.rep.2 4703:::Clinical.isolate.947.01_EAI.extra.vs.intracellular.in.resting.macrophages.rep.1 4703:::Clinical.isolate.9532.03_Haarlem.extra.vs.intracellular.in.resting.macrophages.rep.1 4703:::H37Rv.extra.vs.intracellular.in.resting.macrophages.rep.2 4704:::CDC1551.extra.vs.intracellular.in.activated.macrophages.rep.2 4704:::Clinical.isolate.12954.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.1 4704:::Clinical.isolate.1500.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.1 4704:::Clinical.isolate.2333.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.2 4704:::Clinical.isolate.2336.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.2 4704:::Clinical.isolate.4130.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.1 4704:::Clinical.isolate.4130.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.2 4704:::Clinical.isolate.4850.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.1 4704:::Clinical.isolate.5468.02_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.2 4704:::Clinical.isolate.9532.03_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.1 4704:::Clinical.isolate.9532.03_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.2 4704:::H37Rv.extra.vs.intracellular.in.activated.macrophages.rep.2 4731:::X0.4ug.ml.PA.824.vs.DMSO.6hrs.rep.2 4731:::X5ug.ml.Capreomycin.vs.Ethanol.6hrs.A 4735:::BCG.wild.type.vs.BCG.with.pMFdosR.at.OD.0.4.rep.1 4735:::BCG.wild.type.vs.BCG.with.pMFdosR.at.OD.0.4.rep.4 4799:::H37Rv.ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.2 4799:::H37Rv.O2.depleted..ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.1 4802:::H37Rv.ctrl.vs.relE1.overexpression.24.hr.rep.1 4802:::H37Rv.ctrl.vs.relE1.overexpression.6.hr.rep.3 4802:::H37Rv.ctrl.vs.relE2.overexpression.6.hr.rep.2 4802:::H37Rv.ctrl.vs.relE3.overexpression.24.hr.rep.1 4928:::Mtb.Erdman.strain.2000.ppm.CO.rep.1 Rohde_CellHostMicrobe2007:::CDC1551.5.uM.cytochalasin.D.treatment.for.2hr.in.macrophages.vs.outside.macrophages Rohde_CellHostMicrobe2007:::CDC1551.ctrl..vs.24.hr.after.macrophage.infection RV0293C 0 -0.262301962018676 -0.824377594915839 1.0931401963931 -1.20943170664769 0.854354962003687 -1.88857412653447 -1.07255087982344 -0.276430639129752 -0.143743932347471 -1.07255087982344 -0.0177497568283315 -0.425994163879955 0.780989300446584 -0.175954111167807 0.117302740778538 -1.23167877817465 0.909096241033672 0.410559592724884 0.498536648308788 1.43695857453709 0.674490759476595 -0.909096241033672 1.10048492335655 0 0 -2.24027287969012 -0.168622689869149 0.457690158216261 -1.68622689869149 -0.698579715172188 -0.409512246825076 -0.722668670867781 -0.216800601260334 -0.0963558227823708 -0.0963558227823708 0.337245379738298 -0.144533734173556 -0.529957025303039 -1.01173613921489 NA NA 0.313156424042705 -0.963558227823707 -1.01173613921489 -0.289067468347112 0.192711645564742 -0.36133433543389 NA -0.658431455679533 -0.17665234176768 0.297097120245643 0.337245379738298 0.609006219721586 0.111323717583516 0.709990273133258 1.10048492335655 0.430924651887825 0.168622689869149 -0.430924651887825 -2.02347227842979 -0.581457551272927 -3.18638738097564 1.18617340459677 -0.39539113486559 0.674490759476595 -1.5661904075982 0.880267601350811 2.25211321384558 0.697354853018175 0.331529356352903 0.0571602338539488 -1.74910315593083 -1.97774409134663 -1.17411354427407 -0.799396455675965 -1.19909468351395 -0.674490759476595 -0.549585063277226 2.84459146387955 1.05572466700684 0 -1.46628425973173 1.61007471616994 -1.19667715391009 -0.174062131477831 0.979099489562799 -1.65359024903939 -0.217577664347289 -0.19581989791256 1.45777035112683 0.0217577664347288 0.456913095129306 0.19581989791256 0.39163979582512 0.0435155328694577 0.848552890954426 0.19581989791256 0.478670861564035 1.1314038546059 2.08874557773397 1.76237908121304 1.06613055530172 -0.413397562259849 -1.63183248260467 -0.174062131477831 0.674490759476595 0.957341723128071 0.739764058780782 0.522186394433493 -1.37073928538792 -0.565701927302951 -0.456913095129306 -0.826795124519697 -0.348124262955662 -0.78327959165024 -2.85026740294948 -1.32722375251846 -1.89292567982141 -0.0435155328694578 -0.718006292346053 -0.739764058780782 -0.478670861564035 0.19581989791256 -0.19581989791256 -1.43601258469211 -1.54480141686575 -1.97995674556033 -0.0217577664347289 -0.152304365043102 -0.58745969373768 0.0217577664347288 -0.892068423823884 -0.565701927302951 -1.63183248260467 -1.10964608817117 0.826795124519697 0.478670861564035 -1.63183248260467 -1.65359024903939 -1.43601258469211 -1.65359024903939 -1.19667715391009 0.39163979582512 0.174062131477831 0.152304365043102 -0.456913095129306 -2.00171451199506 -0.630975226607138 0.0870310657389155 0.935583956693342 -1.78413684764777 NA -2.30632324208126 0.152304365043102 -0.326366496520933 -2.08874557773397 NA NA -1.19667715391009 -1.76237908121304 0.152304365043102 NA 1.06613055530172 -2.63268973860219 0.522186394433493 0.413397562259849 0.282850963651475 -0.108788832173644 -0.108788832173644 0.152304365043102 0.435155328694578 0.0870310657389155 0.39163979582512 -0.152304365043102 -0.130546598608373 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