Bicluster 436 (zzz

GENES 2867:::H37Rv..Dubos.media.replicate.4 2885:::H37Rv..7H9.roll.replicate.3 2885:::Strain.1843...replicate.3 2885:::Strain.1843..replicate.4 2885:::Strain.CDC1551..replicate.2 2885:::Strain.CDC1551..replicate.3 2885:::Strain.H37Ra..replicate.4 4055:::H37Rv.Vs.M.bovis.rep1 4060:::H37Rv.sigE.null.0.05..SDS.exposure.for.1h.rep.6 4062:::H37Rv.0.day.ctrl.vs.Rv3132.34.KO.hypoxia.4.day.rep.1 4062:::H37Rv.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.1 4062:::H37Rv.ctrl.vs.Rv3132.3134.KO..0.05.mM.DETA.NO.40min.rep.2 4062:::MTB.strain.1254.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.6 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.20min.rep.1 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.5min.rep.4 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.KCN...2hr.hypoxia.rep.1 4062:::MTB.strain.1254.Ctrl.vs.high.aeration...0.001.mM.DETA.NO.rep.2 4062:::MTB.strain.1254.Ctrl.vs.high.aeration...0.001.mM.DETA.NO.rep.3 4062:::MTB.strain.1254.Ctrl.vs.high.aeration...0.005.mM.DETA.NO.rep.1 4062:::MTB.strain.1254.Ctrl.vs.high.aeration...0.05.mM.DETA.NO.rep.1 4082:::H37Rv.wild.type.Vs.Rv3676.null.3 4082:::Rv3676.null.Vs.H37Rv.wild.type.3 4084:::High.iron.wt.vs.high.iron.ideR.KO.1a 4084:::High.iron.wt.vs.high.iron.ideR.KO.2a 4084:::High.iron.wt.vs.high.iron.ideR.KO.3b 4084:::High.iron.wt.vs.low.iron.wt.1b 4089:::MTB1254.control.vs..0.5.ug.ml.Streptomycin.for.15.min.rep.2 4089:::MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.15.min.rep.2 4089:::MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.15.min.rep.5 4089:::MTB1254.control.vs..25.ug.ml.Streptomycin.for.15.min.rep.2 4089:::MTB1254.control.vs..5.0.ug.ml.Streptomycin.for.15.min.rep.4 4089:::MTB1254.ethanol.vs..0.5.ug.ml.Tetracyclin.for.30.min.rep.3 4089:::MTB1254.ethanol.vs..1.0.ug.ml.Erythromycin.for.15.min.rep.2 4089:::MTB1254.ethanol.vs..25.ug.ml.Erythromycin.for.15.min.rep.1 4089:::MTB1254.ethanol.vs..5.0.ug.ml.Erythromycin.for.15.min.rep.2 4089:::MTB1254.ethanol.vs..5.0.ug.ml.Erythromycin.for.15.min.rep.4 4089:::MTB1254.ethanol.vs..5.0.ug.ml.Erythromycin.for.30.min.rep.4 4089:::MTB1254.ethanol.vs..5.0.ug.ml.Tetracyclin.for.15.min.rep.3 4099:::H37.Rv3133c.DosR.mutant.2hr.rep.2 4099:::H37.Rv3133c.DosR.mutant.2hr.rep.3 4099:::H37.Rv3133c.DosR.mutant.2hr.rep.4 4099:::H37.Rv3133c.DosR.mutant.2hr.rep.5 4099:::H37Rv.hypoxia.2hr.rep.2 4099:::H37Rv.hypoxia.2hr.rep.3 4101:::H37Rv.Day24.3 4101:::H37Rv.Day60.2 4101:::NRP.Day10..1 4101:::NRP.Day8..1 4107:::EMB..10ug.mL..DMSO..12h 4107:::pH4.8vspH6.8..11h. 4107:::Succinate.7H9.based.medium..1 4107:::X.109..0.1ug.mL..vs.DMSO..12h..GEO.acc.GSM28050. 4107:::X.241..0.1ug.mL..DMSO..12h..1..GEO.acc.GSM28046. 4107:::X.241..1ug.mL..DMSO..12h..1 4107:::X0.13mg.mL.TLMvsDMSO..6h 4107:::X0.15mg.mL.TricvsEtOH..6h 4107:::X0.1mM.GSNO.DMSO..3.5h 4107:::X0.1mMGSNO.20ug.mLCPZvsDMSO.6hA 4107:::X0.2mg.mL.AmpvsEtOH..6hA 4107:::X0.32ug.mL.CervsEtOH..6h 4107:::X0.4mM.NaN3.DMSO 4107:::X1.2mg.mL.PZAvspH5.6..6h. 4107:::X1.ug.mL..111891vsDMSO..6h 4107:::X10ug.mL.methoxatinvsDMSO..6h.A 4107:::X10ug.mL.Nvb.DMSO..6h..1 4107:::X10ug.mL.Nvb.DMSO..6h..2 4107:::X10ug.mL.Nvb.DMSO..6h..3 4107:::X10ug.mL.TriclosanvsDMSO..6h 4107:::X10ug.mLMethoxatinvsDMSO.6h 4107:::X12.5ug.mL.AntimycinvsDMSO..6h 4107:::X12ug.mLEthionamidevsEtOH.6h 4107:::X1mM.DNP.DMSO..6h..2 4107:::X1mM.DTNBvsDMSO..6h 4107:::X1ug.mL..121940.DMSO..12h 4107:::X20mJ.UVvsctrl..6h. 4107:::X20ug.mL.Cephalexin.Ctrl..6h..2 4107:::X20ug.mL.CPZvsDMSO..6h 4107:::X20ug.mL.Prcp.6778.DMSO..6h..2 4107:::X20uM.DCCD.DMSO..6h..1 4107:::X250uM.DeferroxaminevsDMSO..6h 4107:::X25ug.mL.AntimycinvsDMSO..6h 4107:::X25ug.mL.CPZvsDMSO..6h.A 4107:::X25ug.mLCPZ.0.1mMGSNO.DMSO..1 4107:::X2ug.mL..111891vsDMSO..6h 4107:::X2ug.mL..111895vsDMSO..6hB 4107:::X2ug.mL..121940vsDMSO..6hA 4107:::X30ug.mLProcept6776vsDMSO.6hA 4107:::X40mJ.UV.ctrl..6h. 4107:::X50ug.mL.Triclosan.EtOH 4107:::X50ug.mLAntimycinAvsDMSO..6hA 4107:::X50uM.CCCP.DMSO..6h..1 4107:::X50uM.CCCPvsDMSO..6h 4107:::X5ug.mL.CFZ.0.1mM.GSNO.DMSO..1 4107:::X5ug.mLCFZ.0.1mMGSNOvsDMSO.A 4107:::X5ug.mLProcept.6778vsDMSO.6h 4107:::X60J.UVvsctrl..6h. 4107:::X9ug.mLAscidideminNpvsDMSO.6h 4107:::X9ug.mLNaturalproductvsDMSO.6h 4363:::H37Rv.hypoxia.1.day.rep.10 4363:::H37Rv.hypoxia.4hr.rep.3 4364:::H37dosR.mutant.hypoxia.1.day.rep.2 4364:::H37dosR.mutant.hypoxia.12hr.rep.1 4364:::H37dosR.mutant.hypoxia.4hr.rep.5 4396:::H37Rv.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.3 4396:::Strain.27.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.1 4396:::Strain.27.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.1 4396:::Strain.49.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.1 4489:::MTB1254.WT.vs.Rv3662c.3665c.KO.in.7H9OADC..OD.1.5.5 4489:::MTB1254.WT.vs.Rv3662c.3665c.KO.in.7H9OADC..OD.1.5.6 4523:::H37Rv.sigB.null.mutant.control.vs.0.05..SDS.for.60.min.rep.5 4523:::H37Rv.wild.type.control.vs.5mM.Diamide.for.60.min.rep.3 4523:::H37Rv.wild.type.control.vs.5mM.Diamide.for.60.min.rep.4 4523:::H37Rv.wild.type.control.vs.5mM.Diamide.for.60.min.rep.5 4575:::Purified.Surfactant.Lipids.30min.rep.1 4575:::Whole.Lung.Surfactant.2hrs.rep.3 4575:::Whole.Lung.Surfactant.30min.rep.4 4583:::X12ug.ml.Ethionamide.vs.Ethanol.6hrs.rep.2 4599:::H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.3 4599:::H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.4 4599:::H37Rv.wild.type.vs.sigE.mutant.in.7H9.media..DS..rep.2 4599:::H37Rv.wild.type.vs.sigE.mutant.in.7H9.media..DS..rep.3 4615:::AA_30uM_1h_01 4615:::AA_30uM_24h_02 4615:::AA_30uM_24h_04 4615:::AA_30uM_30min_01 4615:::AA_30uM_30min_06 4615:::AA_30uM_4h_04 4615:::AA_30uM_4h_06 4615:::AA_30uM_4h_09 4615:::aceatate.induction.2 4615:::Acetate.3mM.10m.01 4615:::Acetate.3mM.10m.03 4615:::Acetate.3mM.10m.06 4615:::Acetate.3mM.60m.02 4615:::Acetate.3mM.60m.03 4615:::ETYA_30uM_10min.01 4615:::Glucose_20mM_1h.OA_50uM_10min 4615:::Glucose_40mM_1h.OA_50uM_10min 4615:::L2A_30uM_10min_01 4615:::L2A_30uM_10min_03 4615:::L2A_30uM_10min_04 4615:::L2A_30uM_1h_02 4615:::L2A_30uM_2h_02 4615:::L2A_30uM_4h_07 4615:::MAPP_5uM_4h_01 4615:::MDA_1254.pMV261_01 4615:::MDA_1254.pMV261_02 4615:::MDA_1254.pMV261_04 4615:::MDG_1254.pMV261_01 4615:::MDG_1254.pMV261_02 4615:::MDG_1254.pMV261_04 4615:::MDG_1254.pMV261.3524_03 4615:::MTB1254_Bottom_10D_01 4615:::MTB1254_Bottom_10D_02 4615:::MTB1254_Bottom_14D_01 4615:::MTB1254_Bottom_14D_04 4615:::MTB1254_Bottom_21D_01 4615:::MTB1254_Bottom_42D_01 4615:::MTB1254_Bottom_42D_03 4615:::MTB1254_Pellicle_42D_02 4615:::MTB1254.0485.1._Act_2h_01 4615:::MTB1254.0485.1._OA_10m_02 4615:::MTB1254.3524.1.T0_WtT0_01 4615:::MTB1254.Rv3524.2._PA50.OA30_2h_02 4615:::MTB1254vsMTB1254.0485.1. 4615:::OA_100uM_2h_T0_01 4615:::OA_50uM_10min_04 4615:::OA_50uM_10min.Glu_40mM_20min_01 4615:::OA_50uM_1h_02 4615:::OA_50uM_24h_04 4615:::OA_50uM_24h_05 4615:::OA_50uM_2h_09 4615:::OA_50uM_30min_01 4615:::OA_50uM_30min_09 4615:::OA_50uM_4h_06 4615:::OA_50uM_4h_07 4615:::OA50um_10min.10mM_G_20min 4615:::PA_50uM_12h_06 4615:::PA_50uM_1h_02 4615:::PA_50uM_24h_04 4615:::PA_50uM.OA_10uM_12h_01 4615:::PA_50uM.OA_10uM_24h_01 4615:::PA_50uM.OA_10uM_24h_02 4615:::PA_50uM.OA_10uM_30min_01 4615:::PA_50uM.OA_10uM_4h_04 4615:::PA_50uM.OA_30uM_24h_02 4615:::Rv.MT71_100503_01 4615:::Rv.MT96_100503_01 4615:::Strain95.OA.10M.01 4615:::TBD1115 4615:::TBD662 4615:::Test.5 4615:::WT_65.4_SDS_02 4615:::WT_85.1_OA_10min_01 4615:::WT_85.1_PA_10min_01 4615:::WT_85.1_PA_10min_02 4615:::X2.BA_100uM_30min_01 4615:::X7H9_MTB1254_OA100_10M_01 4615:::X7H9_MTB1254.3524.1._OA100_10M_01 4630:::H37Rv.wild.type.Cy3.vs.Rv0485.Tn.mutant.Cy5.rep.1 4630:::H37Rv.wild.type.Cy5.vs.Rv0485.Tn.mutant.Cy3..DS..rep.3 4638:::CDC1551.wild.type.vs.kstR.null.in.1mg.ml.cholesterol.for.24.hrs.rep.1 4638:::CDC1551.wild.type.vs.kstR.null.in.1mg.ml.cholesterol.for.24.hrs.rep.2 4638:::CDC1551.wild.type.vs.kstR.null.in.1mg.ml.cholesterol.for.24.hrs.rep.3 4638:::CDC1551.wild.type.vs.kstR.null.rep.1 4696:::H37Rv.wt.vs.dosS.dosT.null.anaerobic.Gaspak.4hr.rep.1 4696:::H37Rv.wt.vs.dosS.null.nitric.oxide.treatment.1hr.rep.1 4696:::H37Rv.wt.vs.dosS.null.nitric.oxide.treatment.1hr.rep.4 4699:::CDC1551.Ctrl.vs.clinical.isolate.1500.03_Beijing.rep.2 4699:::CDC1551.Ctrl.vs.clinical.isolate.2169.99_Uganda.rep.2 4699:::CDC1551.Ctrl.vs.clinical.isolate.2333.99_Uganda.rep.2 4699:::CDC1551.Ctrl.vs.clinical.isolate.4850.03_EAI.rep.1 4699:::CDC1551.Ctrl.vs.clinical.isolate.947.01_EAI.rep.2 4699:::CDC1551.Ctrl.vs.clinical.isolate.9532.03_Haarlem.rep.2 4703:::CDC1551.extra.vs.intracellular.in.resting.macrophages.rep.2 4703:::Clinical.isolate.1500.03_Beijing.extra.vs.intracellular.in.resting.macrophages.rep.2 4703:::Clinical.isolate.1797.03_EAI.extra.vs.intracellular.in.resting.macrophages.rep.2 4703:::Clinical.isolate.2336.02_Haarlem.extra.vs.intracellular.in.resting.macrophages.rep.2 4703:::Clinical.isolate.5468.02_Afri2.extra.vs.intracellular.in.resting.macrophages.rep.2 4703:::Clinical.isolate.9532.03_Haarlem.extra.vs.intracellular.in.resting.macrophages.rep.1 4704:::CDC1551.extra.vs.intracellular.in.activated.macrophages.rep.2 4704:::Clinical.isolate.12954.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.1 4704:::Clinical.isolate.1500.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.1 4704:::Clinical.isolate.1934.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.1 4704:::Clinical.isolate.1934.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.2 4704:::Clinical.isolate.2336.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.2 4704:::Clinical.isolate.4130.02_Haarlem.extra.vs.intracellular.in.activated.macrophages.rep.2 4704:::Clinical.isolate.4850.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.1 4704:::Clinical.isolate.5468.02_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.1 4735:::BCG.wild.type.vs.BCG.with.empty.pMV361.at.OD.0.4.rep.3 4799:::H37Rv.O2.depleted..ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.1 4799:::H37Rv.O2.depleted..ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.3 4802:::H37Rv.ctrl.vs.relE2.overexpression.72.hr.rep.4 4802:::H37Rv.ctrl.vs.relE3.overexpression.6.hr.rep.1 4815:::H37Rv.reaeration.for.4hrs.rep.2 4928:::Mtb.Erdman.strain.200.ppm.CO.rep.1 Provvedi_Microbiology2009:::H37Rv.Control.vs.400.ug.ml.vancomycin.for.1.hr.rep.2 Provvedi_Microbiology2009:::H37Rv.Control.vs.subinhibitory.conc..5.ug.ml..vancomycin.DS.rep.2 Raghavan_Nature2008:::espR.mutant..R...rep2 Raghavan_Nature2008:::espR.mutant.complemented.with.N.terminal.Flag.espR..RFL..rep1 Raghavan_Nature2008:::WT.rep2 Rohde_CellHostMicrobe2007:::CDC1551.ctrl..vs.24.hr.after.macrophage.infection Schnappinger_JEM2003:::MTB.in.NOS2.null.macrophages.for.24hrs Schnappinger_JEM2003:::MTB.in.Wild.type.macrophages.for.24hrs Schnappinger_JEM2003:::MTB.in.Wild.type.macrophages.for.48hrs RV0863 1.01173613921489 0.0182294799858536 -1.47658787885417 -1.65888267871271 -0.309901159759518 -1.25783411902392 -0.546884399575619 0.770195529402328 -1.63434299411637 1.73440481008267 -1.67934433992132 -0.550604701613547 0.137651175403387 -0.825907052420321 -1.54169316451793 3.90929338145618 0.302832585887451 0.137651175403387 0.385423291129483 0.495544231452192 0.887487841416573 -0.887487841416573 1.84360807590269 2.23331384804473 1.51385703793636 -1.27403810123357 -0.602736423362064 -1.43508672229063 -0.688841626699502 -0.832350298928564 -0.143508672229063 0.459227751133001 -0.172210406674875 -0.545332954470439 -0.344420813349751 -0.0574034688916252 0.574034688916251 1.20547284672413 1.675 1.375 -0.125 -0.675 2.375 0.0750000000000001 -4.77331922091129 -5.53428315467976 0.691785394334969 0.760963933768466 0.364589599717078 -0.83855607934928 NA -0.145835839886831 0.309901159759517 0.309901159759517 0.947932959264404 2.16930811831662 NA NA 0.200524279844393 0.0182294799858539 NA -2.55212719801955 0.729179199434157 NA NA NA NA 0.255212719801955 -0.127606359900977 -0.0911473999292696 0.455736999646348 NA -0.638031799504887 NA 0.674490759476595 0 -0.255212719801955 NA NA -0.0729179199434157 -0.656261279490741 NA NA 0.0729179199434157 -1.13022775912294 0.528654919589764 0.41927803967464 0.145835839886831 NA -0.109376879915124 NA -0.0546884399575618 NA NA 0.401048559688786 -0.200524279844393 0.0546884399575618 -1.23960463903807 -1.20698346432654 0.627158074601045 1.98492994931684 0.32760979746006 0.23125397467769 -1.19332980522782 0.415071236600982 -1.11550394836514 1.32303956666563 -1.125 -1.125 0.674490759476595 -0.310479873409861 -0.931439620229584 0.524603924037352 -0.685547985041785 0.729776887302545 -2.27778846642916 0 1.58831694973521 -1.1314038546059 -0.848552890954426 0.217577664347289 -1.02522595440442 1.16012410629974 0.647511129097532 -1.24106299743694 -0.755429650613787 0.242816673411574 0.134898151895319 -0.269796303790638 1.51085930122757 0.971266693646297 0.701470389855659 0.485633346823149 1.32200188857413 0.512612977202212 0.377714825306893 0.782409280992851 0.998246324025361 -0.485633346823149 -0.809388911371914 0.539592607581276 -1.21408336705787 -0.620531498718468 -0.188857412653447 1.24106299743694 1.67273708350196 1.64575745312289 1.67273708350196 1.75367597463915 1.18710373667881 0.134898151895319 1.18710373667881 -1.78065560501821 -1.94253338729259 0.0809388911371914 -1.13314447592068 -3.53433157965736 -3.4264130581411 -1.37596114933225 -0.512612977202212 0.91730743288817 -0.971266693646297 0.998246324025361 -0.0809388911371914 0.674490759476595 -1.72669634426008 -0.458653716444085 0.998246324025361 -1.37596114933225 0.701470389855659 1.13314447592068 -1.02522595440442 -1.37596114933225 -1.53783893160664 0.134898151895319 0.404694455685957 1.5648185619857 0.890327802509106 1.67273708350196 1.75367597463915 1.72669634426008 1.75367597463915 0.971266693646297 -0.485633346823149 -0.21583704303251 0.674490759476595 1.53783893160664 0.728450020234723 0.620531498718468 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