GENES 2885:::Strain.CDC1551..replicate.2 4060:::H37Rv.wild.type.Vs.H37Rv.sigE.null.mutant.rep.1 4060:::H37Rv.wild.type.Vs.H37Rv.sigE.null.mutant.rep.2 4062:::H37Rv.ctrl.vs.Rv3132.3134.KO..0.05.mM.DETA.NO.40min.rep.1 4062:::H37Rv.ctrl.vs.Rv3132.3134.KO..0.05.mM.DETA.NO.40min.rep.4 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.24hrs.rep.1 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.24hrs.rep.2 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.24hrs.rep.3 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.24hrs.rep.4 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.2hrs.rep.1 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.2hrs.rep.2 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.40min.rep.3 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.8hrs.rep.3 4062:::MTB.strain.1254.Ctrl.vs.5.0.mM.DETA.NO.40min.rep.2 4062:::MTB.strain.1254.Ctrl.vs.5.0.mM.DETA.NO.40min.rep.4 4062:::MTB.strain.1254.Ctrl.vs.high.aeration...0.001.mM.DETA.NO.rep.2 4062:::MTB.strain.1254.Ctrl.vs.high.aeration...0.05.mM.DETA.NO.rep.2 4062:::MTB.strain.1254.Ctrl.vs.low.aeration...0.01.mM.DETA.NO.rep.1 4062:::MTB1254.Day.0.rep.1 4062:::MTB1254.Day.0.vs.low.Oxygen.Day.4.rep.5 4101:::NRP.Day10..1 4107:::DIPED..100ug.mL..DMSO..12h..2 4107:::DIPED.50ug.mL.vs.DMSO.12h.1 4107:::DIPED.50ug.mL.vs.DMSO.12h.2 4107:::DIPED.5ug.mL.vs.DMSO.12h.1 4107:::DIPED.5ug.mL.vs.DMSO.12h.2 4107:::pH5.6vspH6.8..2h.A 4107:::pH5.6vspH6.8..4h. 4107:::X.109..10ug.mL..DMSO..12h..replicate.2..GEO.acc..GSM28054. 4107:::X.241..0.1ug.mL..DMSO..12h..1..GEO.acc.GSM28046. 4107:::X.241..1ug.mL..DMSO..12h..1 4107:::X0.05mM.palmitatevs10mM.gluc 4107:::X0.1mg.mLTriclosanvsEtOH.6hB 4107:::X0.1mg.mLTriclosanvsEtOH.6hC 4107:::X0.1mM.GSNO.DMSO..6h 4107:::X0.1mMGSNO.10ug.mLmdvsDMSO.6h 4107:::X0.1mMGSNO.10ug.mLmdvsDMSO.6hA 4107:::X0.1ug.mL.Mtmvsctrl..1.5h. 4107:::X0.5ug.mL..111891vsDMSO.6hA 4107:::X0.5ug.mL..111895vsDMSO..6h 4107:::X0.5uMValinomycin.70mMKClvsDMSO.6h 4107:::X0.5uMValinomycinvsDMSO.6h 4107:::X1.2mg.mL.PZAvspH5.6..16h. 4107:::X1.ug.mL..111891vsDMSO..6h 4107:::X100ug.mLCephalexinvsEtOH.6h 4107:::X100uM.DCCD.DMSO..6h 4107:::X10mM.succinatevs10mM.glucose 4107:::X10ug.mL..241vsDMSO..6h 4107:::X10ug.mL.capreomycinvsEtOH..6h 4107:::X10ug.mL.clotrimvsEtOH..6h 4107:::X10ug.mL.ClotrimvsEtOH..6hA 4107:::X10ug.mL.EMBvsDMSO..6hA 4107:::X10ug.mL.PA.21vsDMSO..6hA 4107:::X10ug.mL.TriclosanvsDMSO..6h 4107:::X10ug.mL.TriclosanvsDMSO..6hA 4107:::X10ug.mLchlorpromazinevsctrl.6h 4107:::X10ug.mLchlorpromazinevsctrl.6hA 4107:::X10ug.mLmnd.Dubos.vsDMSO.6h 4107:::X10uM.ValinomycinvsDMSO..6h 4107:::X1mM.DNP.DMSO..6h..1 4107:::X1mM.DNP.DMSO..6h..2 4107:::X1ug.mL..109vsDMSO..6hA 4107:::X1ug.mL..59vsDMSO..6h 4107:::X1uM.ValinomycinvsDMSO..6h 4107:::X1uM.ValinomycinvsDMSO..6h.A 4107:::X1uM.ValinomycinvsDMSO..6h.B 4107:::X2.5mM.Dinitrophenol.DMSO..6h 4107:::X20uM.DCCD.DMSO..6h..2 4107:::X25ug.mL.AntimycinvsDMSO..6h 4107:::X25ug.mL.TRZ.DMSO..6h 4107:::X2mM.DTTvsDMSO..6h 4107:::X2mM.ZnSO4.DMSO..6h 4107:::X2ug.mL..111895vsDMSO..6hA 4107:::X2ug.mL..121940vsDMSO..6h 4107:::X2ug.mL..121940vsDMSO..6hA 4107:::X30ug.mL.RoxvsEtOH..6h 4107:::X4mM.H2O2vsctrl..2h.A 4107:::X50ug.mL.Thioridazine.DMSO..6h 4107:::X50ug.mL.Triclosan.DMSO..6h 4107:::X50ug.mL.Triclosan.EtOH 4107:::X50uM.CCCP.DMSO..6h..1 4107:::X50uM.CCCP.DMSO..6h..2 4107:::X50uM.CCCPvsDMSO..6h 4107:::X50uM.NigericinvsDMSO..6h.A 4107:::X5ug.mLProcept.6778vsDMSO.6h 4107:::X60ug.mL.ChlorprovsEtOH..6h 4364:::H37dosR.mutant.hypoxia.8hr.rep.2 4365:::H37Rv.sigma.H.null.mutant.diamide.1h.rep.1 4523:::H37Rv.sigB.null.mutant.control.vs.0.05..SDS.for.60.min.rep.1 4523:::H37Rv.sigB.null.mutant.control.vs.0.05..SDS.for.60.min.rep.3 4523:::H37Rv.sigB.null.mutant.control.vs.5mM.Diamide.for.60.min.rep.6 4523:::H37Rv.wild.type.control.vs.0.05..SDS.for.60.min.rep.2 4523:::H37Rv.wild.type.control.vs.0.05..SDS.for.60.min.rep.3 4523:::H37Rv.wild.type.control.vs.0.05..SDS.for.60.min.rep.4 4523:::H37Rv.wild.type.control.vs.0.05..SDS.for.60.min.rep.6 4523:::H37Rv.wild.type.vs.H37Rv.sigB.null.mutant.rep.3 4523:::H37Rv.wild.type.Vs.H37Rv.wild.type.rep.2 4575:::Purified.Surfactant.Lipids.30min.rep.1 4575:::Whole.Lung.Surfactant.2hrs.rep.1 4575:::Whole.Lung.Surfactant.30min.rep.3 4615:::AA_30uM_24h_02 4615:::AA_30uM_24h_03 4615:::AA_30uM_4h_08 4615:::AA_3uM_10.min_01 4615:::Acetate.3mM.10m.01 4615:::Acetate.3mM.30m.03 4615:::Acetate.3mM.30m.04 4615:::CHP25uM_24h.50uMOA_30min_01 4615:::CK_OA_NA_2h.02 4615:::CK.for.OA.4h.1 4615:::ETYA_30uM_10min.01 4615:::Glucose_40mM_1h.OA_50uM_10min 4615:::Glucose_5mM_10min_01 4615:::L2A_30uM_1h_05 4615:::L2A_30uM_4h_04 4615:::L2A_30uM_4h_06 4615:::L2A_30uM_4h_08 4615:::LAA_50uM_10min_01 4615:::MAPP_5uM_4h_01 4615:::MDGCy3.7H9Cy5.03 4615:::MTB1254_Bottom_10D_03 4615:::MTB1254_Bottom_10D_04 4615:::MTB1254_Bottom_42D_02 4615:::MTB1254_Bottom_42D_03 4615:::MTB1254_Pellicle_21D_02 4615:::MTB1254_Pellicle_42D_02 4615:::MTB1254_Pellicle_42D_04 4615:::MTB1254_Pellicle_56D_02 4615:::MTB1254_SDS_90MIN_01 4615:::MTB1254_SDS_90MIN_02 4615:::MTB1254_SDS_90MIN_03 4615:::MTB1254.0465.4._SDS_60MIN_01 4615:::MTB1254.0485.1._PA_12h_02 4615:::MTB1254.0485.1._PA_12h_04 4615:::MTB1254.0485.1._PA_4h_01 4615:::MTB1254.0485.1._PA_4h_04 4615:::MTB1254.3219.1._01 4615:::MTB1254.3219.2._01 4615:::MTB1254.3524.1._OA_10min_01 4615:::MTB1254.3524.1._PA_12h_02 4615:::MTB1254.B4.1._PA_30MIN_03 4615:::MTB1254.B4.1._PA_4h_04 4615:::MTB1254.B4.1.Compl._PA_4h_03 4615:::MTB1254whiB4_SDS_90MIN_01 4615:::MTB1254whiB4_SDS_90MIN_02 4615:::MTB1254whiB4_SDS_90MIN_03 4615:::MTB1254whiB4_SDS_90MIN_04 4615:::MTB6548_PA50_1h_02 4615:::MTB889_PA50_1h_02 4615:::OA_50uM_10min.Glu_40mM_20min_01 4615:::OA_50uM_1h_01 4615:::OA_50uM_2h_01 4615:::OA_50uM_2h..1.5.BSA.10mMGlu._30.min_01 4615:::PA_100uM_24h_01 4615:::PA_100uM_2h_T0_01 4615:::PA_100uM_4h_T0_01 4615:::PA_50uM_1h_07 4615:::PA_50uM_2h_07 4615:::PA_50uM_3d_05 4615:::PA_50uM_3d_06 4615:::PA_50uM.MAPP_30m_01 4615:::PA_50uM.OA_10uM_24h_01 4615:::PA_50uM.OA_10uM_24h_02 4615:::Rv.MT106_100503_01 4615:::Rv.MT71_100503_02 4615:::Rv.MT71_100703_01 4615:::Rv.MT90_100603_01 4615:::Rv.MT90_100703_01 4615:::Rv.MT90_100803_01 4615:::Rv.MT90_100903_01 4615:::SDS_3h_01 4615:::SDS_60min_01 4615:::Starvation_1254_12h_01 4615:::Starvation_1254_12h_04 4615:::Starvation_1254_24h_01 4615:::Starvation_1254_24h_04 4615:::Starvation_1254_24h_05 4615:::Starvation_1254_3d_02 4615:::Starvation_1254_5d_02 4615:::Starvation_1254_5d_03 4615:::Starvation_1254_5d_04 4615:::Starvation_1254_6h_01 4615:::Starvation_1254_6h_03 4615:::Starvation_1254_6h_05 4615:::Starvation_1254_OA50_12h_01 4615:::Starvation_1254_OA50_12h_03 4615:::Starvation_1254_OA50_12h_04 4615:::Starvation_1254_OA50_24h_01 4615:::Starvation_1254_OA50_5d_04 4615:::Starvation_1254_OA50_6h_01 4615:::Starvation_1254_OA50_6h_03 4615:::Starvation_1254_OA50_6h_04 4615:::Starvation_1254_PA50_24h_01 4615:::Starvation_1254_PA50_24h_02 4615:::Starvation_1254_PA50_6h_02 4615:::Starvation_1254_PA50_6h_03 4615:::Starvation_1254_PA50_6h_04 4615:::Starvation_1254_PA50.OA30_24h_01 4615:::Starvation_1254_PA50.OA30_24h_02 4615:::Starvation_1254_PA50.OA30_24h_03 4615:::Starvation_1254_PA50.OA30_24h_04 4615:::Starvation_OA50_24h_02 4615:::Starvation_OA50_6h_01 4615:::Succinate_10mM_30min_01 4615:::TBD1276 4615:::TBD425 4615:::TBD817 4615:::TBD819 4615:::TBE055 4615:::TBE056 4615:::X2.BA.OA.1 4615:::X7H9_MTB1254.3524.1._OA100_10M_01 4615:::X7H9MTB1254_SDS_90MIN_01 4630:::H37Rv.wild.type.Cy3.vs.Rv0485.Tn.mutant.Cy5.rep.2 4696:::H37Rv.wt.vs.dosT.null.nitric.oxide.treatment.1hr.rep.2 4696:::H37Rv.wt.vs.dosT.null.rapid.anaerobic.dormancy.day.6.rep.3 4699:::CDC1551.Ctrl.vs.clinical.isolate.12954.03_Beijing.rep.2 4699:::CDC1551.Ctrl.vs.clinical.isolate.1500.03_Beijing.rep.3 4699:::CDC1551.Ctrl.vs.clinical.isolate.1797.03_EAI.rep.3 4699:::CDC1551.Ctrl.vs.clinical.isolate.2199.99_Uganda.rep.3 4699:::CDC1551.Ctrl.vs.clinical.isolate.947.01_EAI.rep.1 4699:::CDC1551.Ctrl.vs.H37Rv.rep.2 4699:::CDC1551.Ctrl.vs.H37Rv.rep.3 4703:::CDC1551.extra.vs.intracellular.in.resting.macrophages.rep.1 4703:::Clinical.isolate.10517.01_Afri2.extra.vs.intracellular.in.resting.macrophages.rep.2 4703:::Clinical.isolate.1934.03_Beijing.extra.vs.intracellular.in.resting.macrophages.rep.2 4703:::Clinical.isolate.2333.99_Uganda.extra.vs.intracellular.in.resting.macrophages.rep.1 4704:::Clinical.isolate.2333.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.1 4704:::Clinical.isolate.4850.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.1 4799:::H37Rv.ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.3 4799:::H37Rv.O2.depleted..ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.2 4799:::H37Rv.O2.depleted..ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.3 4802:::H37Rv.ctrl.vs.relE1.overexpression.24.hr.rep.1 4802:::H37Rv.ctrl.vs.relE1.overexpression.72.hr.rep.2 4802:::H37Rv.ctrl.vs.relE2.overexpression.6.hr.rep.1 4802:::H37Rv.ctrl.vs.relE3.overexpression.24.hr.rep.1 4802:::H37Rv.ctrl.vs.relE3.overexpression.72.hr.rep.3 RV0479C -0.134898151895319 0.869738084588241 0.283996109253303 0.505868069607446 0.385423291129483 -0.481779113911854 -2.79431886068875 -0.867202405041337 -1.10809196199726 -1.20444778477963 -2.57751825942842 -0.650401803781003 -2.48116243664605 -0.578134936694225 -1.15626987338845 0.915380316432522 0.313156424042705 0.674490759476595 0.722668670867781 0.529957025303039 -0.909096241033672 0.66442373321575 0.402681050433788 0.34227889286872 0.8556972321718 0.8556972321718 0.34227889286872 0.17113944643436 0.604021575650682 -0.110737288869292 0.66442373321575 NA 0.624155628172372 0.734892917041663 NA NA -0.885898310954334 0.775161022085042 0.291943761564496 0.372479971651254 -1.38924962399657 -0.775161022085042 -0.624155628172372 1.05703775738869 0.68455778573744 NA NA 1.81206472695205 -2.19461172486415 0.875831284693489 0.755026969563353 0.473150234259701 0.8556972321718 0.181206472695205 -0.0604021575650682 0.734892917041663 0.68455778573744 -0.51341833930308 -1.18790909877967 0.956367494780247 NA 0.0906032363476023 -0.100670262608447 -0.865764258432644 -0.785228048345887 NA NA NA 0 NA NA NA 0.0402681050433788 -2.54695764399371 -0.573820496868148 -3.35231974486129 -1.20804315130136 NA NA NA NA NA 0.503351313042235 0.0906032363476023 0.302010787825341 -1.58052312295262 -0.812847838343589 1 -2.18085345564099 -2.65299698727461 0.314762354422411 -2.20333648095688 -4.76640136696794 -1.3264984936373 -3.95701245559602 0 0.562075632897163 -0.924302151875334 1.02422670883483 -0.674490759476595 0.836368541750978 0.620531498718468 0.656504339223886 -0.260803093664284 0.386708035433248 0.422680875938666 0.818382121498269 -0.35073519492783 0.602545078465758 -0.314762354422411 0.908314222761815 0.818382121498269 0.854354962003687 0.314762354422411 0.78240928099285 0.56657223796034 0.710463599982014 0.674490759476595 0.584558658213049 0.764422860740141 -0.422680875938666 -0.044966050631773 -2.52709204550564 -1.48387967084851 0.80039570124556 0.278789513916993 0.548585817707631 -2.52709204550564 -0.836368541750978 -0.242816673411574 0.11691173164261 -0.386708035433248 -1.21408336705787 -1.19609694680516 -1.91555375691353 -1.35797472907954 0.908314222761815 0.998246324025361 0.80039570124556 -1.17811052655245 -0.224830253158865 -1.6637438733756 -2.16736364045146 -1.96951301767166 -1.68173029362831 -1.268042627816 -1.17811052655245 -3.82211430370071 -2.11340437969333 0.818382121498269 -0.152884572148028 0.494626556949503 -0.440667296191376 -2.4371599442421 -1.16012410629974 -2.11340437969333 -1.17811052655245 -7.18557489095733 0.188857412653447 -0.692477179729304 -0.0809388911371914 0.584558658213049 0.476640136696794 0.980259903772652 1.03421916453078 2.65299698727461 1.08817842528891 2.72494266828544 0.224830253158865 1.23206978731058 -0.674490759476595 -0.800395701245559 -2.2393093214623 -1.71770313413373 -2.85084761005441 -2.38320068348397 -1.23206978731058 -2.76091550879086 -2.38320068348397 -1.16012410629974 -2.58105130626377 -1.59179819236476 -1.35797472907954 -0.35073519492783 -1.93354017716624 -0.962273483519942 -1.64575745312289 -0.656504339223886 NA -2.41917352398939 -1.51985251135393 -1.68173029362831 -1.68173029362831 -0.998246324025361 -3.55231799991007 -2.76091550879086 -2.07743153918791 -1.42992041009038 -1.03421916453078 0.0989253113899006 -1.14213768604703 1.60978461261747 0.602545078465758 0.314762354422411 0.458653716444085 0.188857412653447 0.710463599982014 -0.440667296191376 0.818382121498269 0.56657223796034 -1.50186609110122 -0.11691173164261 -0.944287063267233 0.997073296617576 0.189905165289527 -0.674490759476595 -0.838003670864861 0.919760126558994 0.592734303782462 -1.00151658225313 0.797125443017794 -0.633612531629529 0.797125443017794 1.79385840286329 -1.96606880953816 -0.588385556139158 0.875402900597283 -1.39715943034438 3.37245379738298 -1.30246491485136 NA 3.04683756867014 NA NA 0.720478765804545 1.07305348098549 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