[+] Show/hide bicluster #569 rows and columns.
bicluster 569
Mycobacterium tuberculosis H37Rv
14x242
[+] Show/hide bicluster #569 rows (genes).
bicluster 569 genes
Mycobacterium tuberculosis H37Rv
14
[+] Show/hide bicluster #569 rows (short gene names).
bicluster 569 short names
Mycobacterium tuberculosis H37Rv
14
short_name
[+] Show/hide bicluster #569 rows (long gene names).
bicluster 569 long names
Mycobacterium tuberculosis H37Rv
14
long_name
[+] Show/hide bicluster #569 rows (NCBI RefSeq gene IDs).
bicluster 569 NCBI RefSeq IDs
Mycobacterium tuberculosis H37Rv
26
[+] Show/hide bicluster #569 gene upstream sequences.
bicluster 569 upstream sequences
Mycobacterium tuberculosis H37Rv
14
upstream
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bicluster 569 arrays
Mycobacterium tuberculosis H37Rv
242
[+] Show/hide bicluster #569 ratios.
bicluster 569 ratios
Mycobacterium tuberculosis H37Rv
14x242
GENES 2867:::H37Ra..Sauton.s.media.replicate.4 2885:::H37Rv..7H9.roll.replicate.4 2885:::Strain.M3061a..replicate.4 4060:::H37Rv.sigE.null.0.05..SDS.exposure.for.1h.rep.6 4062:::H37.Rv3132.34.KO.0.days.vs.Rv3132.34.KO..complemented..hypoxia.4.day.rep.4 4062:::H37Rv.0.day.ctrl.vs.Rv3132.34.KO.hypoxia.4.day.rep.1 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.16hrs.rep.2 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.24hrs.rep.1 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.24hrs.rep.4 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.2hrs.rep.4 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.40min.rep.2 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.5min.rep.3 4062:::MTB.strain.1254.Ctrl.vs.high.aeration...0.001.mM.DETA.NO.rep.2 4062:::MTB.strain.1254.Ctrl.vs.high.aeration...0.005.mM.DETA.NO.rep.2 4062:::MTB.strain.1254.Ctrl.vs.high.aeration...0.01.mM.DETA.NO.rep.2 4062:::MTB.strain.1254.Ctrl.vs.high.aeration...0.01.mM.DETA.NO.rep.3 4062:::MTB1254.Day.0.rep.1 4068:::H37Rv.delta.mprAB.mutant.vs..H37Rv.delta.mprAB.mutant.SDS.treated.rep.6 4068:::H37Rv.SDS.treated.vs..H37Rv.delta.mprAB.mutant.SDS.treated.rep.4 4068:::H37Rv.vs..H37Rv.SDS.treated.rep.4 4089:::H37Rv.whiB7.null.ethanol.vs..1.0.ug.ml.Tetracyclin.for.15.min.rep.3 4089:::H37Rv.whiB7.null.ethanol.vs..1.0.ug.ml.Tetracyclin.for.2.hr.rep.1 4089:::H37Rv.whiB7.null.ethanol.vs..1.0.ug.ml.Tetracyclin.for.2.hr.rep.2 4089:::H37Rv.whiB7.null.ethanol.vs..1.0.ug.ml.Tetracyclin.for.2.hr.rep.3 4089:::H37Rv.whiB7.null.ethanol.vs..1.0.ug.ml.Tetracyclin.for.2.hr.rep.4 4089:::H37Rv.whiB7.null.ethanol.vs..1.0.ug.ml.Tetracyclin.for.24.hr.rep.2 4089:::H37Rv.whiB7.null.vs..H37Rv.whiB7.null.with.whiB7.over.expression.rep.2 4089:::H37Rv.wild.type.vs..H37Rv.whiB7.null.with.whiB7.over.expression.rep.2 4089:::MTB1254.control.vs..0.5.ug.ml.Streptomycin.for.15.min.rep.1 4089:::MTB1254.control.vs..0.5.ug.ml.Streptomycin.for.15.min.rep.3 4089:::MTB1254.control.vs..0.5.ug.ml.Streptomycin.for.15.min.rep.5 4089:::MTB1254.control.vs..1.0.ug.ml.Erythromycin.for.2.hr..ref..rep.1 4089:::MTB1254.control.vs..1.0.ug.ml.Erythromycin.for.2.hr..ref..rep.4 4089:::MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.15.min.rep.2 4089:::MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.15.min.rep.3 4089:::MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.15.min.rep.4 4089:::MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.2.hr..ref..rep.2 4089:::MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.2.hr..ref..rep.3 4089:::MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.24.hr..ref..rep.2 4089:::MTB1254.control.vs..100.ug.ml.Streptomycin.for.15.min.rep.4 4089:::MTB1254.control.vs..25.ug.ml.Streptomycin.for.15.min.rep.4 4089:::MTB1254.control.vs..5.0.ug.ml.Streptomycin.for.15.min.rep.2 4089:::MTB1254.ethanol.vs..0.5.ug.ml.Erythromycin.for.15.min.rep.1 4089:::MTB1254.ethanol.vs..0.5.ug.ml.Erythromycin.for.15.min.rep.3 4089:::MTB1254.ethanol.vs..0.5.ug.ml.Erythromycin.for.15.min.rep.4 4089:::MTB1254.ethanol.vs..0.5.ug.ml.Erythromycin.for.30.min.rep.4 4089:::MTB1254.ethanol.vs..0.5.ug.ml.Tetracyclin.for.30.min.rep.2 4089:::MTB1254.ethanol.vs..1.0.ug.ml.Erythromycin.for.15.min.rep.1 4089:::MTB1254.ethanol.vs..1.0.ug.ml.Erythromycin.for.15.min.rep.2 4089:::MTB1254.ethanol.vs..1.0.ug.ml.Erythromycin.for.15.min.rep.4 4089:::MTB1254.ethanol.vs..1.0.ug.ml.Erythromycin.for.30.min.rep.1 4089:::MTB1254.ethanol.vs..1.0.ug.ml.Erythromycin.for.30.min.rep.2 4089:::MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.2.hr.rep.3 4089:::MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.24.hr.rep.3 4089:::MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.30.min.rep.1 4089:::MTB1254.ethanol.vs..100.ug.ml.Erythromycin.for.15.min.rep.1 4089:::MTB1254.ethanol.vs..100.ug.ml.Erythromycin.for.15.min.rep.2 4089:::MTB1254.ethanol.vs..100.ug.ml.Erythromycin.for.15.min.rep.3 4089:::MTB1254.ethanol.vs..100.ug.ml.Tetracyclin.for.15.min.rep.1 4089:::MTB1254.ethanol.vs..100.ug.ml.Tetracyclin.for.15.min.rep.2 4089:::MTB1254.ethanol.vs..100.ug.ml.Tetracyclin.for.15.min.rep.4 4089:::MTB1254.ethanol.vs..100.ug.ml.Tetracyclin.for.30.min.rep.1 4089:::MTB1254.ethanol.vs..100.ug.ml.Tetracyclin.for.30.min.rep.2 4089:::MTB1254.ethanol.vs..100.ug.ml.Tetracyclin.for.30.min.rep.4 4089:::MTB1254.ethanol.vs..25.ug.ml.Erythromycin.for.15.min.rep.1 4089:::MTB1254.ethanol.vs..25.ug.ml.Erythromycin.for.15.min.rep.2 4089:::MTB1254.ethanol.vs..25.ug.ml.Erythromycin.for.30.min.rep.3 4089:::MTB1254.ethanol.vs..25.ug.ml.Tetracyclin.for.15.min.rep.1 4089:::MTB1254.ethanol.vs..25.ug.ml.Tetracyclin.for.15.min.rep.2 4089:::MTB1254.ethanol.vs..25.ug.ml.Tetracyclin.for.15.min.rep.3 4089:::MTB1254.ethanol.vs..25.ug.ml.Tetracyclin.for.15.min.rep.4 4089:::MTB1254.ethanol.vs..25.ug.ml.Tetracyclin.for.30.min.rep.2 4089:::MTB1254.ethanol.vs..25.ug.ml.Tetracyclin.for.30.min.rep.3 4089:::MTB1254.ethanol.vs..25.ug.ml.Tetracyclin.for.30.min.rep.4 4089:::MTB1254.ethanol.vs..5.0.ug.ml.Erythromycin.for.15.min.rep.2 4089:::MTB1254.ethanol.vs..5.0.ug.ml.Erythromycin.for.15.min.rep.4 4089:::MTB1254.ethanol.vs..5.0.ug.ml.Tetracyclin.for.15.min.rep.2 4089:::MTB1254.ethanol.vs..5.0.ug.ml.Tetracyclin.for.15.min.rep.3 4089:::MTB1254.ethanol.vs..5.0.ug.ml.Tetracyclin.for.15.min.rep.4 4089:::MTB1254.ethanol.vs..5.0.ug.ml.Tetracyclin.for.30.min.rep.2 4089:::MTB1254.ethanol.vs..5.0.ug.ml.Tetracyclin.for.30.min.rep.4 4089:::MTB1254.vs..MTB1254.rep3 4099:::H37Rv.hypoxia.2hr.rep.1 4099:::H37Rv.hypoxia.2hr.rep.5 4101:::H37Rv.Day.0.vs.low.Oxygen.Day.4.rep.2 4101:::H37Rv.Day14.1 4101:::H37Rv.Day14.2 4101:::H37Rv.Day24.2 4101:::H37Rv.Day60.1 4101:::H37Rv.Day60.2 4101:::H37Rv.Day60.3 4101:::NRP.Day10..2 4101:::NRP.Day10..3 4101:::NRP.Day14..3 4101:::NRP.Day30..1 4101:::NRP.Day6..3 4101:::NRP.Day8..3 4107:::DIPED..100ug.mL..DMSO..12h..3 4107:::DIPED.50ug.mL.vs.DMSO.12h.2 4107:::EMB..10ug.mL..DMSO..12h 4107:::EMB.10ug.mL.vs.DMSO.12h.3 4107:::EMB.10ug.mL.vs.DMSO.12h.4 4107:::pH4.8vspH6.8..4h.B 4107:::pH5.6vspH6.8..2h.A 4107:::Rif.0.5ug.mL.vsDMSO.2.5hA 4107:::Rif.5ug.mL.vsDMSO.2.5h 4107:::UV.40J.vs.ctrl.8h.1 4107:::X.109..0.1ug.mL..vs.DMSO..12h..GEO.acc.GSM28050. 4107:::X.109..10ug.mL..vs.DMSO..12h..replicate.1..GEO.acc..GSM28053. 4107:::X.109..1ug.mL..vs.DMSO..12h..replicate.1..GEO.ac.GSM28051. 4107:::X.241..0.1ug.mL..DMSO..12h..1..GEO.acc.GSM28046. 4107:::X.241..10ug.mL..DMSO..12h..2 4107:::X0.12mg.mL.BZA.pH5.6..4h..1 4107:::X0.12mg.mL.PZAvspH5.6..4h. 4107:::X0.2ug.mL.PA824.DMSO..6h..1 4107:::X0.4ug.mL.PA824.DMSO..6h..3 4107:::X0.4ug.mL.PA824.DMSO..6h..4 4107:::X0.5ug.mL.CeruleninvsDMSO..6hB 4107:::X0.5ug.mL.CeruleninvsDMSO..6hC 4107:::X0.5ug.mLRifapentinevsEtOH.6h 4107:::X10ug.mL.Amikacin.EtOH..6h 4107:::X10ug.mL.TetvsEtOH..6hA 4107:::X1ug.mL..111891vsDMSO..6h 4107:::X1ug.mL..124196vsDMSO..6hA 4107:::X1ug.mL..59vsDMSO..6h 4107:::X200uM.Dipyridylvsctrl..6h 4107:::X24ug.mL.cltrmazole.DMS..6h..3 4107:::X2mM.DTTvsDMSO..6h.A 4107:::X50ug.mL.Thioridazine.DMSO..6h 4107:::X5ug.mL.AmivsEtOH..6hA 4107:::X5ug.mL.OfloxvsEtOH..6h 4363:::H37Rv.hypoxia.12hr.rep.3 4363:::H37Rv.hypoxia.4hr.rep.6 4363:::H37Rv.hypoxia.4hr.rep.7 4364:::H37dosR.mutant.hypoxia.4.day.rep.1 4364:::H37dosR.mutant.hypoxia.4hr.rep.2 4489:::MTB1254.Opp.KO.complemented.vs.Opp.KO.in.7H9OADC..OD..1.0.3 4489:::MTB1254.WT.vs.Rv3662c.3665c.KO.in.7H9OADC.Exp2..OD1.4 4523:::H37Rv.sigB.null.mutant.control.vs.5mM.Diamide.for.60.min.rep.3 4523:::H37Rv.wild.type.Vs.H37Rv.wild.type.rep.6 4570:::MTB.strain.TB294.Ctrl.vs.SigA.overexpression.rep2 4575:::Extracted.Lung.Surfactant.30min.rep.4 4575:::Whole.Lung.Surfactant.2hrs.rep.1 4583:::X0.32ug.mL.Cerulenin.vs.Ethanol.6hrs.rep.2 4583:::X0.5ug.mL.Cerulenin.vs.DMSO..6hrs.rep.3 4615:::AA_30uM_1h_07 4615:::AA_30uM_2h_04 4615:::AA_30uM_2h_07 4615:::AA_30uM_4h_01 4615:::AA_3uM_10min_02 4615:::AA_3uM_2h_T0_01 4615:::aceatate.induction.2 4615:::Acetate.3mM.2h.06 4615:::CK_LA_2h.2 4615:::CK.4h.for.OA.NA.0.05mM 4615:::CK.for.AA.NA.4h 4615:::CK.for.OA.NA..2h 4615:::CK.MDG.AA.Na.2h 4615:::ETYA_10uM_1h_02 4615:::L2A_30uM_10min_04 4615:::MDA_1254.pMV261_03 4615:::MDG_1254.pMV261.3524_04 4615:::MTB1254_Pellicle_10D_01 4615:::MTB1254_Pellicle_42D_04 4615:::MTB1254_SDS_90MIN_02 4615:::MTB1254_SDS_90MIN_03 4615:::MTB1254.0485.1._PA_12h_02 4615:::MTB1254.0485.1._PA_12h_03 4615:::MTB1254.0485.1._PA_4h_04 4615:::MTB1254.3524.1._OA_10min_02 4615:::MTB1254.3524.1._PA_12h_03 4615:::MTB1254.3524.1._PA_12h_04 4615:::MTB1254.3524.1._PA_12h_05 4615:::MTB1254.3524.2._INH_20MIN 4615:::MTB1254.B4.1.Compl._OA_30MIN_01 4615:::MTB1254.B4.1.Compl._OA_30MIN_04 4615:::MTB6548_PA50_1h_01 4615:::MTB6548_PA50_1h_02 4615:::OA_50uM_10min_08 4615:::OA_50uM_1h_08 4615:::OA_50uM.0.5.BSA_1h_01 4615:::PA_10uM_10min_02 4615:::PA_50uM_10.min_03 4615:::PA_50uM_10min_07 4615:::PA_50uM_10min_09 4615:::PA_50uM_12h_01 4615:::PA_50uM_12h_02 4615:::PA_50uM_1h_11 4615:::PA_50uM_24h_07 4615:::PA_50uM_24h_08 4615:::PA_50uM_2h_03 4615:::PA_50uM_30min_09 4615:::PA_50uM_3d_04 4615:::PA_50uM_8h_01 4615:::PA_50uM_8h_04 4615:::Rv.MT90_100803_01 4615:::Rv.p0485.1._300uM.PA_10m 4615:::Starvation_1254_PA50.OA30_24h_03 4615:::Strain95.OA.10M.01 4615:::TBD816 4615:::TBD818 4615:::Tet_100uM_30M_01 4615:::Tet_20uM_30M_01 4615:::WT_85.1_OA_10min_01 4615:::WT_85.1_PA_10min_01 4615:::X2.2..Dipyridyl_1mM_20min_01 4615:::X2.2..Dipyridyl_1mM.Dpd.AA_50uM_01 4615:::X7h9.control.4h 4630:::H37Rv.wild.type.Cy3.vs.Rv0485.Tn.mutant.Cy5.rep.3 4696:::H37Rv.wt.vs.dosS.dosT.null.rapid.anaerobic.dormancy.day.6.rep.1 4696:::H37Rv.wt.vs.dosS.null.nitric.oxide.treatment.1hr.rep.1 4696:::H37Rv.wt.vs.dosT.null.anaerobic.Gaspak24hr.rep.2 4699:::CDC1551.Ctrl.vs.clinical.isolate.1934.03_Beijing.rep.2 4699:::CDC1551.Ctrl.vs.clinical.isolate.9532.03_Haarlem.rep.2 4699:::CDC1551.Ctrl.vs.H37Rv.rep.1 4699:::CDC1551.Ctrl.vs.H37Rv.rep.2 4704:::Clinical.isolate.10514.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.2 4704:::Clinical.isolate.4850.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.2 4704:::Clinical.isolate.947.01_EAI.extra.vs.intracellular.in.activated.macrophages.rep.2 4735:::BCG.wild.type.vs.BCG.with.pMFdosR.at.OD.0.4.rep.2 4735:::H37Rv.dosR.KO.vs.BCG.with.pMFdosR.at.OD.0.4.rep.2 4795:::CDC1551.ctrl.vs.40.ug.ml.Thioridazine.4hr.rep.2 4795:::CDC1551.ctrl.vs.ctrl.at.0.hr.rep.1 4799:::H37Rv.ctrl.vs.1ug.ml.Isoniazid.for.6hrs.rep.3 4802:::H37Rv.ctrl.vs.relE1.overexpression.6.hr.rep.4 4802:::H37Rv.ctrl.vs.relE2.overexpression.24.hr.rep.2 4802:::H37Rv.ctrl.vs.relE2.overexpression.72.hr.rep.1 4802:::H37Rv.ctrl.vs.relE3.overexpression.6.hr.rep.1 4802:::H37Rv.ctrl.vs.relE3.overexpression.72.hr.rep.2 4815:::H37Rv.reaeration.for.12hrs.rep.4 4815:::H37Rv.reaeration.for.4hrs.rep.2 4815:::H37Rv.reaeration.for.4hrs.rep.4 4860:::CDC1551.nadABC.null.nicotinamide.starvation.rep.1 4860:::CDC1551.nadABC.null.nicotinamide.starvation.rep.2 4860:::M..bovis.nadABC.null.nicotinamide.starvation.rep.2 4928:::Mtb.Erdman.strain.20.ppm.CO.rep.1 4928:::Mtb.Erdman.strain.2000.ppm.CO.rep.1 Maciag_JBacteriol2007:::H37Rv.wild.type.vs.H37Rv.FurB.null.rep.5 Provvedi_Microbiology2009:::H37Rv.Control.vs.400.ug.ml.vancomycin.for.1.hr.DS.rep.1 Provvedi_Microbiology2009:::H37Rv.Control.vs.400.ug.ml.vancomycin.for.1.hr.DS.rep.2 Raghavan_Nature2008:::Complemented.espR.mutant..R...rep3 Raghavan_Nature2008:::espR.mutant.complemented.with.WT.espR..R...rep2
RV0189C -0.735808101247195 0.242124888017239 -1.00308882178571 -1.94253338729259 -0.550242461678275 0.337245379738298 -2.99970890398802 0.195247325111646 -1.75722592600481 0.337245379738298 1.72172641234815 0.0532492704849943 0.0177497568283315 -0.337245379738298 -0.621241488991601 -0.692240516304927 0.798739057274915 -0.25 0.3 -1.45 -0.944287063267233 -2.11340437969333 -2.60803093664283 -0.764422860740141 -1.12415126579433 -2.69796303790638 0.629524708844822 0.809388911371914 1.12415126579433 -0.269796303790638 -0.314762354422411 -3.19258959485588 -2.96775934169702 0.44966050631773 0.224830253158865 0.224830253158865 -0.224830253158865 -0.134898151895319 -0.404694455685957 0.494626556949503 0.674490759476595 -0.584558658213049 2.42816673411574 0.179864202527092 1.1691173164261 0.134898151895319 0.224830253158865 -2.11340437969333 1.79864202527092 0.89932101263546 1.07918521516255 -0.359728405054184 -0.359728405054184 0.134898151895319 -1.07918521516255 3.23755564548766 2.29326858222042 0.404694455685957 -1.84360807590269 -1.52884572148028 -2.29326858222042 -2.92279329106525 -2.1583704303251 -2.24830253158865 3.5073519492783 -0.809388911371914 -2.29326858222042 -0.719456810108368 -1.12415126579433 -1.52884572148028 NA -0.674490759476595 -0.674490759476595 -2.20333648095688 1.57381177211206 0.314762354422411 0.629524708844822 -0.944287063267233 0.179864202527092 -1.30401546832142 -0.674490759476595 0.314762354422411 -0.6 -0.1 -1.2205070885767 0.546016329100101 0.931439620229584 3.08338632903586 3.4045724049771 2.79431886068875 2.50525139234164 -0.160593037970618 0.481779113911854 0.546016329100101 -1.02779544301195 -0.674490759476595 0.192711645564741 0.532492704849944 0.85198832775991 0.816488814103247 0.354995136566629 0.922987355073235 -0.354995136566629 0.283996109253303 0.745489786789921 1.27798249163986 0.0354995136566629 0.319495622909966 2.16547033305644 0.922987355073235 0.780989300446584 0.212997081939977 1.02948589604322 0.816488814103247 -0.425994163879955 0.709990273133258 -1.9169737374598 0.780989300446584 0.603491732163269 0.283996109253303 -0.24849659559664 -2.66246352424972 0.0709990273133259 0.106498540969989 0.603491732163269 -2.80446157887637 -0.745489786789921 -0.319495622909966 2.16547033305644 -1.31348200529653 -0.177497568283314 -0.802097119377573 -0.747408679420011 -0.291671679773663 -1.8829533702055 0.674490759476595 NA NA 1.0997131947988 -1.39297004674514 0.35 -2.24830253158865 0.786905886056028 0.0843113449345744 -0.210778362336436 1.05389181168218 0.800957776878457 0.210778362336436 3.75185484958856 -0.379401052205585 -0.75880210441117 0.843113449345744 -0.252934034803723 -2.69796303790638 -0.0421556724672872 NA 0.168622689869149 1.43329286388776 1.43329286388776 2.48718467556995 -0.126467017401862 -0.548023742074734 -1.18035882908404 -0.716646431943882 -0.126467017401862 -0.590179414542021 -0.29508970727101 -0.505868069607447 -0.252934034803723 0.29508970727101 -0.800957776878457 -2.3185619857008 -0.885269121813031 0.505868069607447 0.126467017401862 -0.0421556724672872 -1.60191555375691 -2.44502900310266 0.0421556724672872 -1.47544853635505 0.632335087009308 0.29508970727101 0.126467017401862 -0.0421556724672872 -0.168622689869149 -2.19209496829893 0.0421556724672872 -2.86658572777553 -0.252934034803723 0 -1.68622689869149 NA -0.168622689869149 -1.93916093349521 0.505868069607447 1.47544853635505 0.29508970727101 -1.13820315661675 2.9508970727101 0.885269121813031 0.800957776878457 -2.52934034803723 -3.16167543504654 0.885269121813031 0.168622689869149 -3.962633211925 -1.01173613921489 1.60191555375691 0.958710136111387 -2.7498469424815 -0.830142473201963 2.07535618300491 -0.775 0.225 0.425 -0.125 -0.820630424029858 0.0112415126579433 1.0904267278205 -1.3 0 -2.00778644681405 -0.0941149896944086 -0.454889116856309 NA -0.352810551110834 NA 0.809388911371914 0.249042741960589 0.54163651897363 -0.970857911367826 -0.398562721508897 NA NA NA NA NA -0.5485463325 0.16548044 0.507220295 -0.7025 -0.5875
RV0356C 0.4 NA -1.15060188381302 -3.03520841764468 -1.85995936704152 -1.53293354426499 0.347464936700064 0.224830253158865 0.224830253158865 -0.265708481005931 -1.28766417718259 1.00151658225313 -0.0613173417705996 0.38834316454713 -0.388343164547131 NA 0.306586708852998 NA NA NA 0.674490759476595 -0.674490759476595 -0.299773670878487 0.424679367077856 0.349735949358235 0.0499622784797478 0.399698227837982 -0.199849113918991 0.224830253158865 0.374717088598109 0.924302151875334 0.44966050631773 0.249811392398739 0 0.174867974679117 0.474641645557604 0.249811392398739 1.07418898731458 -0.149886835439243 1.59879291135193 0.474641645557604 1.07418898731458 2.14837797462916 0.149886835439243 0.399698227837982 -0.349735949358235 -0.674490759476595 1.39894379743294 1.54883063287218 0.499622784797478 0.12490569619937 0.374717088598109 -0.549585063277226 0.524603924037352 -1.37396265819306 2.02347227842979 1.27403810123357 0.974264430355082 -1.17411354427407 0.499622784797478 -0.824377594915839 -1.22407582275382 -1.1491324050342 -0.824377594915839 1.92354772147029 0.699471898716469 -0.174867974679117 -1.29901924047344 -2.14837797462916 -0.824377594915839 -2.2982648100684 -0.599547341756974 -1.09917012655445 -0.774415316436091 2.02347227842979 1.09917012655445 -0.649509620236721 -0.349735949358235 -2.2982648100684 0.549585063277226 -0.549585063277226 0.274792531638613 0.175 1.375 -0.887001546708947 0.055437596669309 0.277187983346546 1.05331433671687 0.887001546708947 0.997876740047565 0.68373035892148 0.0739167955590788 -0.813084751149868 0.739167955590789 0.942439143378256 0.628292762252171 -0.0369583977795395 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA -0.620959746819723 -0.107062025313745 -1.07062025313745 -0.749434177196217 -0.24356610758877 1.7 0.3 1.22634683541199 -0.613173417705996 NA -0.469210963114153 1.34898151895319 1.34898151895319 1.59425088603559 0.363187332025859 1.34898151895319 0.622606854901472 NA -0.172946348583742 -0.380481966884233 0.172946348583742 -1.40086542352831 -1.76405275555417 1.38357078866994 NA 0.847437108060337 2.7498469424815 1.36627615381156 1.71216885097905 0.432365871459356 -0.0518839045751227 -0.795553203485215 -0.743669298910092 -0.760963933768466 -0.830142473201963 -1.76405275555417 -0.622606854901472 -1.55651713725368 -0.639901489759847 -1.00308882178571 -1.38357078866994 -0.847437108060337 0.709080029193344 0.951204917210583 0.674490759476595 -1.41816005838669 -1.69487421612068 -1.15874053551107 NA 1.15874053551107 0.207535618300491 0.830142473201963 0.622606854901472 -2.19641862701353 -1.95429373899629 -1.6775795812623 NA -0.89932101263546 -1.2106244400862 -0.311303427450736 NA -0.103767809150245 -1.1414459006527 -1.72946348583742 2.50772205446426 0.778258568626841 -1.66028494640393 1.7467581206958 0.588017585184724 1.12415126579433 -1.2106244400862 -1.81593666012929 0.44966050631773 0.32859806230911 -2.819025481915 -0.432365871459356 1.24521370980294 0.657196124618221 -2.95419416441146 -0.211013868886533 0.195941449680352 -1.53127631881173 -0.583343359547326 -0.291671679773663 -2.00524279844393 0.0683028617191489 0.42689288574468 0.358590024025532 -1.62671300814944 0.039675927028035 -0.79901213045689 -0.197158837385466 0 NA NA NA NA NA NA NA NA NA NA NA -0.075 0.075 -1.30162429800428 1.44027743118026 1.05266143227768 -0.540327747373621 0.363894197210806
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RV1430 -0.463712397140159 0.6 0.45 -3.33498208852316 -0.357083343252315 0.47611112433642 -1.19027781084105 -0.833194467588735 -3.1740741622428 -2.53925932979424 -1.78541671626158 0.833194467588735 0.833194467588735 0.991898175700875 0.39675927028035 0.15870370811214 0.674490759476595 NA NA NA -0.520321443024802 -1.56096432907441 -1.86930296197799 -1.36825268350966 -0.770846582258966 -1.56096432907441 1.42606617717909 1.32971035439672 0.46250794935538 0.346880962016535 0.46250794935538 -1.59950665818735 -2.04274344298626 1.0406428860496 0.828660075928388 0.501050278468328 0.674490759476595 0.905744734154285 -1.21408336705787 0.115626987338845 0.963558227823707 0.693761924033069 1.67659131641325 0.0770846582258966 0.0578134936694224 0.751575417702492 -0.674490759476595 1.46460850629204 0.404694455685957 -0.770846582258966 0.481779113911854 0.982829392380182 -1.0406428860496 -0.443236784798905 -0.616677265807173 1.1948122025014 0.211982810121216 0.173440481008267 -2.08128577209921 0.404694455685957 -1.58023549363088 -1.56096432907441 -2.02347227842979 -1.46460850629204 0.925015898710759 0.481779113911854 0 -0.674490759476595 -2.06201460754273 0.154169316451793 -0.867202405041337 -1.54169316451793 -1.58023549363088 -1.50315083540498 1.88857412653447 0.366152126573009 -0.847931240484863 -0.269796303790638 -0.867202405041337 -0.173440481008267 -1.46460850629204 0.905744734154285 0.805641740485933 0.318509525308392 -0.274369122498954 1.55475836082741 1.16606877062055 1.82912748332636 2.21781707353321 2.21781707353321 1.14320467707897 -1.05174830291266 -3.04092444103007 0.411553683748431 2.74369122498954 NA -2.9037398797806 NA NA 0.782409280992851 1.268042627816 -0.0809388911371914 0.56657223796034 0.674490759476595 0.593551868339404 0.674490759476595 -0.404694455685957 0.512612977202212 0.674490759476595 1.40294077971132 0.971266693646297 NA 0.647511129097532 0.56657223796034 -2.61702414676919 -2.45514636449481 -2.91380008093889 0.620531498718468 -0.21583704303251 0.836368541750978 0.0809388911371914 -2.75192229866451 0.161877782274383 1.02522595440442 0.809388911371914 NA -0.56657223796034 0.0539592607581276 0.296775934169702 -1.07918521516255 -0.620531498718468 NA NA NA -1.87155994521434 0.486119466289438 0.735808101247195 0.613173417705996 2.125 NA NA -0.803437522317709 0.565381960149499 -0.112415126579432 0.544780998038789 0.0481779113911854 -0.216800601260334 -0.867202405041337 NA -0.602223892389817 -1.25262569617082 1.99938332273419 -0.578134936694224 -0.602223892389817 0.192711645564741 NA 1.46942629743115 3.17974215181823 0.62631284808541 3.32427588599179 0.216800601260334 0.433601202520668 -1.30080360756201 0 0.819024493650151 1.18035882908404 -0.313156424042705 -0.746757626563373 0.216800601260334 2.91476363916671 -0.216800601260334 -0.62631284808541 -0.867202405041337 0.0963558227823707 0.554045980998632 0.505868069607446 -2.36071765816808 -3.25200901890501 -1.15626987338845 -0.698579715172188 -0.433601202520668 -0.650401803781002 0.770846582258966 3.13156424042705 0.26497851265152 0.433601202520668 -0.867202405041337 -1.80667167716945 -1.01173613921489 0.650401803781003 -0.891291360736929 NA -0.433601202520668 -0.216800601260334 -0.746757626563373 -0.192711645564741 -0.674490759476595 -1.15626987338845 1.6621379429959 0.433601202520668 0 -0.62631284808541 -1.22853674047523 0.62631284808541 0.457690158216261 -2.6256961708196 -0.529957025303039 3.32427588599179 0.814250106034809 -2.40889556955927 0.554045980998632 1.03582509491049 -0.930332082036683 -1.34898151895319 0.790782269731181 -2.00021397637887 0.815916241302333 0.206698781129924 0.88118954060652 -0.05 1.2 0.543944160868222 0.0652732993041867 -0.376921306766333 -0.579640496425199 -0.980119384864428 -0.93796371239714 0.790418858761635 0.790418858761635 0.07935185405607 -0.138865744598123 -0.198379635140175 -0.744836421507897 0.215174966213392 1.32415363823626 NA NA 0.306141953002141 -0.0599358950000001 NA -0.51 -0.13
RV1835C 0.524603924037352 0.885269121813031 -0.927424794280319 -4.78670861564035 0.0224830253158865 -1.59629479742794 -2.09092135437744 -0.427177481001844 -1.28153244300553 -1.05670218984667 -0.696973784792482 1.01173613921489 0.247313278474751 0.562075632897163 0.112415126579432 -0.831871936687801 -0.696973784792482 NA NA NA -0.039675927028035 -0.499916680553241 -0.484046309742027 -0.611009276231739 -0.372953714063529 -0.690361130287809 0.087287039461677 0.166638893517747 1.75367597463915 -0.817324096777521 NA NA NA NA 1.83302782869522 1.37278707517001 -0.325342601629887 0.134898151895319 -1.10299077137937 NA 0.896675950833591 NA 1.69019449139429 0.214250005951389 1.21408336705787 0.134898151895319 -0.388824084874743 0.769712984343879 1.88063894112886 1.51562041247094 0.944287063267233 0.674490759476595 -2.10282413248586 -0.674490759476595 -1.18234262543544 0.833194467588735 1.817157457884 1.43626855841487 -1.88063894112886 -1.78541671626158 -3.21375008927084 -1.26169447949151 -2.19804635735314 NA 1.08712040056816 1.45213892922608 0.230120376762603 NA -4.35641678767824 -1.95999079518493 -2.53132414438863 -2.59480562763349 NA NA 1.29343522111394 0.817324096777521 NA -1.67432412058308 -2.05521302005221 -0.817324096777521 NA 0.579268534609311 0.337245379738298 0.936792721495271 NA NA NA NA NA NA NA NA NA NA NA NA NA 0.177497568283314 0.354995136566629 0 -0.674490759476595 0.461493677536618 -0.816488814103247 -0.638991245819932 0.958486868729898 0.319495622909966 0.177497568283314 0.212997081939977 -0.0354995136566629 -0.106498540969989 0.24849659559664 0.283996109253303 1.70397665551982 NA NA NA NA 1.10048492335655 1.06498540969989 1.20698346432654 0.638991245819932 NA 1.38448103260985 0.638991245819932 NA NA NA NA NA -0.496993191193281 -0.24849659559664 NA NA NA 0.674490759476595 0.505868069607446 1.43329286388776 -0.632335087009308 NA NA NA -0.706609367070719 0.503191518974603 0.219209496829893 1.02859840820181 0.117302740778538 0.821119185449768 NA NA -0.205279796362442 -0.117302740778538 4.48682983477909 -0.293256851946346 NA 0.527862333503422 1.40763288934246 NA 0.0293256851946346 0.117302740778538 1.6129126857049 0.527862333503422 0.117302740778538 0.850444870644403 -0.70381644467123 -1.64223837089954 -1.67156405609417 -0.293256851946346 -0.997073296617576 -0.527862333503422 0.439885277919519 -0.439885277919519 -0.586513703892691 -0.0879770555839037 0.410559592724884 0 -0.175954111167807 -0.615839389087326 NA -0.557188018698057 NA 0.175954111167807 -0.791793500255134 0.117302740778538 0.117302740778538 -0.293256851946346 0.0879770555839037 -0.439885277919519 -2.55133461193321 -0.410559592724884 -0.410559592724884 -0.527862333503422 NA 0.0293256851946346 -0.557188018698057 0.205279796362442 NA 0.32258253714098 -0.586513703892691 NA 0.586513703892691 1.43695857453709 -0.938421926228306 -1.20235309298002 0.674490759476595 0.293256851946346 -0.967747611422941 -0.0293256851946346 2.43403187115467 -0.0201340525216894 -3.63285845768723 0.115261079151064 0.960508992925531 0.102195569617666 0.224830253158865 0.756247215170728 -1.49205531641792 0.660725641936256 0.52307446653287 0.0275302350806774 0.475 0.225 0.165441129682938 0.114536166703573 -1.34898151895319 NA NA NA NA NA NA NA NA -1.02414315987416 0.0451164387609763 0.568467128388301 0.25 -0.3 0.59357813 -0.653776959956551 NA -0.256176778839668 -0.395614772385311
RV3727 -0.172063969254233 -0.107918521516255 -1.69971671388102 -5.32098265809314 0.312568888537934 0.427725847472963 -1.06931461868241 -0.822549706678774 -0.608686782942293 -1.71090338989185 -1.62864841922397 -0.312568888537934 0.723843741877322 0.970608653880954 0.592235788808718 0.477078829873689 0.888353683213077 NA NA NA -0.582514746820696 -1.13437082275609 -0.674490759476595 -1.56359221515029 -0.367904050623597 -1.68622689869149 1.37964018983849 0.459880063279497 0.643832088591295 0.797125443017794 1.31832284806789 -2.17676563285628 -2.05413094931509 0.950418797444293 1.22634683541199 0.429221392394197 0.582514746820696 0.0613173417705994 -1.99281360754449 NA 0.827784113903094 0.337245379738298 -0.582514746820696 0.582514746820696 1.41029886072379 0.183952025311799 0.0613173417705994 1.65556822780619 0.643832088591295 1.19568816452669 0.950418797444293 0.735808101247195 -0.551856075935396 -1.04239481010019 -1.59425088603559 1.10371215187079 1.22634683541199 0.183952025311799 -0.735808101247195 -0.0919760126558994 -1.01173613921489 -0.766466772132495 -1.74754424046209 -4.04694455685957 1.01173613921489 1.53293354426499 -0.275928037967698 -2.51401101259458 -0.245269367082398 -0.275928037967698 -0.551856075935396 -1.41029886072379 -6.53029689856885 -3.89365120243307 0.674490759476595 0.919760126558994 -0.521197405050096 -0.551856075935396 -1.41029886072379 -0.367904050623597 -2.82059772144758 3.21916044295648 0.805037358084969 0.674490759476595 -0.19581989791256 NA 0.652732993041866 0.402518679042484 0.859431774171791 0.989978372780164 0.957341723128071 -1.41425481825738 -0.837674007737062 0.0979099489562799 1.03349390564962 -0.630975226607137 -1.03349390564962 -0.458653716444085 0.0269796303790638 0.917307432888169 0.863348172130042 0.0539592607581276 -0.512612977202212 0.0269796303790638 1.05220558478349 1.07918521516255 1.21408336705787 0.485633346823149 0.890327802509106 -0.0269796303790638 0.728450020234723 1.10616484554162 0.56657223796034 0.647511129097532 0.21583704303251 -0.485633346823149 -0.323755564548766 NA 0.0809388911371914 0.404694455685957 -0.107918521516255 -0.890327802509106 0.944287063267233 1.16012410629974 0.674490759476595 -1.59179819236476 -0.836368541750978 1.64575745312289 2.34722784297855 -0.323755564548766 -0.620531498718468 NA NA NA -0.697354853018175 0.651626665935016 0.2 -0.05 0.551856075935396 NA NA -0.114970015819874 0.973412800608268 0.433601202520668 0.433601202520668 0.674490759476595 0.281037816448581 NA NA -0.786905886056028 -1.57381177211206 1.40518908224291 0.112415126579433 NA -0.224830253158865 NA NA 1.65812311704663 0.196726471514007 1.23656639237376 0.730698322766311 0.730698322766311 -0.477764287962588 -1.5457079904672 -0.983632357570035 -0.843113449345744 -1.43329286388776 0.477764287962588 -1.15225504743918 1.68622689869149 1.29277395566347 -0.505868069607446 -0.140518908224291 0.702594541121453 -0.0281037816448581 -0.112415126579433 -0.927424794280318 -2.4169252214578 -0.815009667700886 NA 1.48950042717748 -1.5457079904672 0.337245379738298 0.393452943028014 -1.51760420882234 1.03983992085975 0.871217230990602 -3.93452943028014 -0.44966050631773 0.0843113449345744 0.252934034803723 NA NA 0.618283196186879 1.32087773730833 NA 0.590179414542021 -2.22019874994379 0.44966050631773 -0.0562075632897163 0.168622689869149 0.309141598093439 0.0843113449345744 0.646386977831737 1.2084626107289 NA -0.252934034803723 1.60191555375691 -0.77868038898924 -2.34296790133975 -0.638991245819932 1.15373419384154 0.112415126579433 -0.936792721495271 0.187358544299054 -1.63001933540177 NA NA NA 0.493529824007265 1.21737356588459 0.289067468347112 -0.192711645564741 -0.075 0.50228035280172 -0.645789025030783 0.157859539451969 0.817999431705658 2.5114017640086 NA 0.0381787222345243 -0.0381787222345242 NA NA NA 0.990658302981249 -0.0632335087009308 NA NA NA -0.815614979920929 0.184706700287437
[+] Show/hide bicluster #569 motif PSSM #1. bicluster 569 motif PSSM #1 Mycobacterium tuberculosis H37Rv 11x4
POSITION A C G T
1 1 0 0 0
2 0 0 0 1
3 0 1 0 0
4 1 0 0 0
5 0 0 0 1
6 0.25 0.25 0 0.5
7 0 0.5 0.25 0.25
8 0 0.75 0.25 0
9 0 0 0 1
10 0 0 0 1
11 0 0 1 0 [+] Show/hide bicluster #569 motif PSSM #2. bicluster 569 motif PSSM #2 Mycobacterium tuberculosis H37Rv 15x4
POSITION A C G T
1 0.111111 0 0 0.888889
2 0 0.111111 0.111111 0.777778
3 0 0 0.222222 0.777778
4 0.111111 0.333333 0.333333 0.222222
5 0.222222 0.444444 0.222222 0.111111
6 0.111111 0.888889 0 0
7 0 0 0.888889 0.111111
8 0 0.333333 0 0.666667
9 0.444444 0.333333 0.222222 0
10 0 0 0.111111 0.888889
11 0.444444 0 0.555556 0
12 0 1 0 0
13 0.444444 0.111111 0 0.444444
14 0.333333 0.444444 0 0.222222
15 0.222222 0 0.777778 0 |