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[+] Show/hide bicluster #578 rows and columns.
bicluster 578
Mycobacterium tuberculosis H37Rv
6x237
[+] Show/hide bicluster #578 rows (genes).
bicluster 578 genes
Mycobacterium tuberculosis H37Rv
6
[+] Show/hide bicluster #578 rows (short gene names).
bicluster 578 short names
Mycobacterium tuberculosis H37Rv
6
short_name
[+] Show/hide bicluster #578 rows (long gene names).
bicluster 578 long names
Mycobacterium tuberculosis H37Rv
6
long_name
[+] Show/hide bicluster #578 rows (NCBI RefSeq gene IDs).
bicluster 578 NCBI RefSeq IDs
Mycobacterium tuberculosis H37Rv
12
[+] Show/hide bicluster #578 gene upstream sequences.
bicluster 578 upstream sequences
Mycobacterium tuberculosis H37Rv
6
upstream
[+] Show/hide bicluster #578 columns (arrays; conditions).
bicluster 578 arrays
Mycobacterium tuberculosis H37Rv
237
[+] Show/hide bicluster #578 ratios.
bicluster 578 ratios
Mycobacterium tuberculosis H37Rv
6x237
GENES 2867:::H37Ra..7H9.shake.replicate.4 2867:::H37Ra..Sauton.s.media.replicate.4 2867:::H37Ra..Youman.media.replicate.4 2867:::H37Rv..7H9.shake.replicate.2 2867:::H37Rv..7H9.shake.replicate.4 2867:::H37Rv..Dubos.media.replicate.1 2867:::H37Rv..Dubos.media.replicate.2 2867:::H37Rv..Youman.media.replicate.2 2885:::H37Ra..7H9.roll.replicate.2 2885:::H37Rv..7H9.roll.replicate.4 2885:::Strain.1006...replicate.2 2885:::Strain.1006...replicate.3 2885:::Strain.1254...replicate.3 2885:::Strain.3160..replicate.4 2885:::Strain.9700665..replicate.2 2885:::Strain.9802501..replicate.2 2885:::Strain.9802501..replicate.3 2885:::Strain.9802826..replicate.3 2885:::Strain.M3061a..replicate.1 2885:::Strain.M3061a..replicate.3 4055:::H37Rv.Vs.M.bovis.rep3 4060:::H37Rv.0.05..SDS.exposure.for.1h.rep.4 4060:::H37Rv.sigE.null.0.05..SDS.exposure.for.1h.rep.3 4060:::H37Rv.wild.type.Vs.H37Rv.sigE.null.mutant.rep.1 4062:::H37Rv.ctrl.vs.Rv3132.34.KO..complemented...0.05.mM.DETA.NO.40min.rep.3 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.24hrs.rep.2 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.2hrs.rep.3 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.5min.rep.4 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.KCN...2hr.hypoxia.rep.3 4062:::MTB.strain.1254.Ctrl.vs.1.0.mM.DETA.NO.40min.rep.2 4062:::MTB.strain.1254.Ctrl.vs.1.0.mM.DETA.NO.40min.rep.3 4062:::MTB.strain.1254.Ctrl.vs.5.0.mM.DETA.NO.40min.rep.2 4062:::MTB.strain.1254.Ctrl.vs.5.0.mM.DETA.NO.40min.rep.4 4062:::MTB.strain.1254.Ctrl.vs.high.aeration...0.001.mM.DETA.NO.rep.2 4062:::MTB.strain.1254.Ctrl.vs.low.aeration...0.001.mM.DETA.NO.rep.3 4062:::MTB.strain.1254.Ctrl.vs.low.aeration...0.005.mM.DETA.NO.rep.1 4062:::MTB.strain.1254.Ctrl.vs.low.aeration...0.01.mM.DETA.NO.rep.1 4068:::H37Rv.SDS.treated.vs..H37Rv.delta.mprAB.mutant.SDS.treated.rep.1 4068:::H37Rv.SDS.treated.vs..H37Rv.delta.mprAB.mutant.SDS.treated.rep.2 4068:::H37Rv.vs..H37Rv.delta.mprAB.mutant.rep.2 4068:::H37Rv.vs..H37Rv.delta.mprAB.mutant.rep.3 4068:::H37Rv.vs..H37Rv.SDS.treated.rep.2 4082:::H37Rv.wild.type.Vs.Rv3676.null.6 4082:::H37Rv.wild.type.Vs.Rv3676.null.7 4082:::Rv3676.null.Vs.H37Rv.wild.type.6 4082:::Rv3676.null.Vs.H37Rv.wild.type.7 4084:::High.iron.wt.vs.high.iron.ideR.KO.2b 4089:::H37Rv.whiB7.null.ethanol.vs..1.0.ug.ml.Tetracyclin.for.15.min.rep.2 4089:::H37Rv.whiB7.null.ethanol.vs..1.0.ug.ml.Tetracyclin.for.2.hr.rep.3 4089:::H37Rv.whiB7.null.ethanol.vs..1.0.ug.ml.Tetracyclin.for.24.hr.rep.1 4089:::H37Rv.whiB7.null.ethanol.vs..1.0.ug.ml.Tetracyclin.for.24.hr.rep.4 4089:::H37Rv.wild.type.vs..H37Rv.whiB7.null.rep.4 4089:::H37Rv.wild.type.vs..H37Rv.whiB7.null.rep.6 4089:::MTB1254.control.vs..0.5.ug.ml.Streptomycin.for.15.min.rep.3 4089:::MTB1254.control.vs..1.0.ug.ml.Erythromycin.for.24.hr..ref..rep.1 4089:::MTB1254.control.vs..1.0.ug.ml.Erythromycin.for.24.hr..ref..rep.2 4089:::MTB1254.control.vs..1.0.ug.ml.Erythromycin.for.24.hr..ref..rep.3 4089:::MTB1254.control.vs..1.0.ug.ml.Erythromycin.for.24.hr..ref..rep.4 4089:::MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.24.hr..ref..rep.2 4089:::MTB1254.control.vs..1.0.ug.ml.Streptomycin.for.24.hr..ref..rep.4 4089:::MTB1254.control.vs..5.0.ug.ml.Streptomycin.for.15.min.rep.2 4089:::MTB1254.ethanol.vs..0.5.ug.ml.Erythromycin.for.15.min.rep.3 4089:::MTB1254.ethanol.vs..0.5.ug.ml.Tetracyclin.for.30.min.rep.3 4089:::MTB1254.ethanol.vs..1.0.ug.ml.Erythromycin.for.15.min.rep.3 4089:::MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.15.min.rep.2 4089:::MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.15.min.rep.3 4089:::MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.2.hr.rep.3 4089:::MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.2.hr.rep.4 4089:::MTB1254.ethanol.vs..25.ug.ml.Tetracyclin.for.15.min.rep.1 4089:::MTB1254.ethanol.vs..5.0.ug.ml.Erythromycin.for.15.min.rep.4 4089:::MTB1254.ethanol.vs..5.0.ug.ml.Tetracyclin.for.15.min.rep.1 4089:::MTB1254.vs..MTB1254.rep1 4089:::MTB1254.vs..MTB1254.rep3 4089:::MTB1254.vs..MTB1254.rep4 4099:::H37Rv.hypoxia.2hr.rep.1 4099:::H37Rv.hypoxia.2hr.rep.2 4100:::H37Rv.0.2..Oxygen..2h..1 4100:::H37Rv.0.2..Oxygen..2h..2 4101:::H37Rv.Day14.2 4101:::H37Rv.Day24.1 4101:::H37Rv.Day60.3 4101:::NRP.Day10..1 4101:::NRP.Day12..1 4101:::NRP.Day8..2 4101:::NRP.Day8..3 4107:::pH5.6vspH6.8..16h. 4107:::pH5.6vspH6.8..2h. 4107:::pH5.6vspH6.8..4h. 4107:::WT.t.6h.WT.t.0h..1 4107:::WT.t.6h.WT.t.0h..2 4107:::X.109..1ug.mL..vs.DMSO..12h..replicate.2..GEO.acc.GSM28052. 4107:::X0.2ug.mL.PA824.DMSO..6h..1 4107:::X0.2ug.mL.PA824.DMSO..6h..2 4107:::X0.2ug.mL.RifvsDMSO..6h 4107:::X0.4ug.mL.PA824.DMSO..6h..1 4107:::X0.4ug.mL.PA824.DMSO..6h..4 4107:::X0.5ug.mL..124196vsDMSO..6hA 4107:::X0.5ug.mL.CeruleninvsDMSO..6hB 4107:::X0.5uMValinomycinvsDMSO.6h 4107:::X100uM.DCCD.DMSO..6h 4107:::X100uM.Dipyridylvsctrl..6h 4107:::X10mM.Succinate.10mM.Gluc..1 4107:::X10ug.mL.EconazolevsEtOH..6h 4107:::X10ug.mL.menadionevsDMSO..6h 4107:::X10ug.mL.PA.1vsDMSO..6hB 4107:::X10ug.mLmnd.Dubos.vsDMSO.6h 4107:::X10uM.ValinomycinvsDMSO..6h 4107:::X1ug.mL..111891.DMSO..12h..2 4107:::X1ug.mL..111895vsDMSO..6hA 4107:::X2.5mM.Dinitrophenol.DMSO..6h 4107:::X20ug.mL.ethambutol.DMSO 4107:::X20ug.mL.Prcp.6776.DMSO..6h..1 4107:::X20ug.mL.Prcp.6778.DMSO..6h..2 4107:::X25ug.mL.AntimycinvsDMSO..6h 4107:::X40ug.mL.5CL.pH5.6..2h..1 4107:::X4mM.H2O2vsctrl..4h. 4107:::X50uM.NigericinvsDMSO..6h.A 4364:::H37dosR.mutant.hypoxia.12hr.rep.1 4365:::H37Rv.sigma.H.null.mutant.diamide.1h.rep.3 4396:::H37Rv.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.2 4396:::H37Rv.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.2 4396:::Strain.49.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.3 4396:::Strain.49.cDNA.Cy5.vs.H37Rv.gDNA.Cy3.rep.1 4489:::MTB1254.Opp.KO.complemented.vs.Opp.KO.in.7H9OADC..OD..1.0.1 4489:::MTB1254.Opp.KO.complemented.vs.Opp.KO.in.7H9OADC..OD..1.0.3 4489:::MTB1254.WT.vs.Rv3662c.3665c.KO.in.7H9OADC..OD.1.0.6 4489:::MTB1254.WT.vs.Rv3662c.3665c.KO.in.7H9OADC..OD.1.5.4 4489:::MTB1254.WT.vs.Rv3662c.3665c.KO.in.7H9OADC.Exp2..OD1.5.1 4523:::H37Rv.sigB.null.mutant.control.vs.0.05..SDS.for.60.min.rep.3 4523:::H37Rv.sigB.null.mutant.control.vs.5mM.Diamide.for.60.min.rep.5 4523:::H37Rv.sigB.null.mutant.control.vs.5mM.Diamide.for.60.min.rep.6 4523:::H37Rv.wild.type.control.vs.0.05..SDS.for.60.min.rep.2 4523:::H37Rv.wild.type.Vs.H37Rv.wild.type.rep.3 4523:::H37Rv.wild.type.Vs.H37Rv.wild.type.rep.4 4575:::Purified.Surfactant.Lipids.2hrs.rep.1 4581:::H37Rv.Ctrl.vs.2.ug.ml.garlic.extract.6hrs.rep.1 4581:::H37Rv.Ctrl.vs.5.ug.ml.garlic.extract.6hrs 4583:::X0.4ug.ml.PA.824.vs.DMSO.6hrs.rep.4 4583:::X0.5ug.mL.Cerulenin.vs.DMSO..6hrs.rep.1 4583:::X0.5ug.mL.Cerulenin.vs.DMSO..6hrs.rep.2 4583:::X0.5ug.mL.Cerulenin.vs.Ethanol..6hrs.rep.2 4583:::X2ug.ml.PA.824.vs.DMSO.6hrs.rep.2 4599:::H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.3 4599:::H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.5 4599:::H37Rv.wild.type.vs.sigE.mutant.in.RPMI.media.for.2.hrs.rep.3 4615:::AA_30uM_1h_05 4615:::AA_60uM_24h_01 4615:::aceatate.induction.2 4615:::Acetate.3mM.2h.03 4615:::CHP.AA.4h.1 4615:::ETYA_30uM_10min.06 4615:::L2A_30uM_10min_04 4615:::L2A_30uM_2h_01 4615:::L2A_30uM_30min_01 4615:::MDA_1254.pMV261_01 4615:::MDA_1254.pMV261_02 4615:::MDA_1254.pMV261.3524_01 4615:::MDGCy3.7H9Cy5.01 4615:::MDGCy3.7H9Cy5.02 4615:::MTB1248_PA50_1h_01 4615:::MTB1248_PA50_1h_02 4615:::MTB1254_Bottom_14D_04 4615:::MTB1254_Bottom_42D_03 4615:::MTB1254_Pellicle_56D_02 4615:::MTB1254_SDS_90MIN_01 4615:::MTB1254_SDS_90MIN_02 4615:::MTB1254_SDS_90MIN_04 4615:::MTB1254.0465.4._SDS_60MIN_01 4615:::MTB1254.0485.1._PA_12h_01 4615:::MTB1254.B4.1.Compl._OA_30MIN_03 4615:::MTB1254whiB4_SDS_90MIN_03 4615:::MTB1254whiB4_SDS_90MIN_04 4615:::OA_50uM_4h_02 4615:::PA_100uM_4h_T0_01 4615:::PA_300uM_2h_T0_01 4615:::PA_50uM_10.min_03 4615:::PA_50uM_10min_04 4615:::PA_50uM_12h_02 4615:::PA_50uM_12h_06 4615:::PA_50uM_24h_10 4615:::PA_50uM_2h_04 4615:::PA_50uM_30min_01 4615:::PA_50uM_8h_06 4615:::Rv.p0485.1. 4615:::Rv.p0485.1._OK 4615:::SDS_60min_01 4615:::Starvation_1254_12h_01 4615:::Starvation_1254_24h_01 4615:::Starvation_1254_3d_03 4615:::Starvation_1254_3d_04 4615:::Starvation_1254_5d_03 4615:::Starvation_1254_5d_04 4615:::Starvation_1254_6h_08 4615:::Starvation_1254_OA50_24h_03 4615:::Starvation_1254_OA50_24h_04 4615:::Starvation_1254_PA50_24h_02 4615:::Starvation_1254_PA50.OA30_24h_03 4615:::TBD040 4615:::TBD091 4615:::TBD1277 4615:::TBD664 4615:::TBD818 4615:::Test_ceramide_5uM 4615:::WM_1254_20d_01 4615:::WM_1254.whiB4._14d_01 4615:::X7H9MTB1254_SDS_90MIN_01 4696:::H37Rv.wt.vs.dosT.null.nitric.oxide.treatment.1hr.rep.3 4699:::CDC1551.Ctrl.vs.clinical.isolate.10517.01_Afri2.rep.2 4699:::CDC1551.Ctrl.vs.clinical.isolate.1797.03_EAI.rep.2 4703:::Clinical.isolate.9532.03_Haarlem.extra.vs.intracellular.in.resting.macrophages.rep.1 4704:::Clinical.isolate.1934.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.1 4729:::H37Rv.wild.type.vs.PepD.null.mutant.rep.2 4735:::H37Rv.dosR.KO.vs.BCG.with.pMFdosR.at.OD.0.4.rep.2 4735:::H37Rv.dosR.KO.vs.BCG.with.pMFdosR.at.OD.0.4.rep.4 4795:::CDC1551.ctrl.vs.40.ug.ml.Thioridazine.6hr.rep.1 4795:::CDC1551.ctrl.vs.40.ug.ml.Thioridazine.6hr.rep.2 4799:::H37Rv.KatG.null..ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.1 4799:::H37Rv.nutrient.starved..ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.1 4799:::H37Rv.nutrient.starved..ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.2 4799:::H37Rv.O2.depleted..ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.2 4802:::H37Rv.ctrl.vs.relE1.overexpression.6.hr.rep.4 4802:::H37Rv.ctrl.vs.relE1.overexpression.72.hr.rep.3 4802:::H37Rv.ctrl.vs.relE1.overexpression.72.hr.rep.4 4802:::H37Rv.ctrl.vs.relE2.overexpression.24.hr.rep.2 4802:::H37Rv.ctrl.vs.relE2.overexpression.24.hr.rep.3 4802:::H37Rv.ctrl.vs.relE2.overexpression.6.hr.rep.2 4802:::H37Rv.ctrl.vs.relE2.overexpression.72.hr.rep.1 4815:::H37Rv.reaeration.for.12hrs.rep.4 4815:::H37Rv.reaeration.for.24hrs.rep.6 4928:::Mtb.Erdman.strain.20.ppm.CO.rep.2 Maciag_JBacteriol2007:::H37Rv.wild.type.vs.H37Rv.FurB.null.rep.3 Maciag_JBacteriol2007:::H37Rv.wild.type.vs.H37Rv.FurB.null.rep.6 Provvedi_Microbiology2009:::H37Rv.Control.vs.400.ug.ml.vancomycin.for.1.hr.rep.2 Provvedi_Microbiology2009:::H37Rv.Control.vs.400.ug.ml.vancomycin.for.4.hrs.rep.1 Raghavan_Nature2008:::Complemented.espR.mutant..R...rep3 Rohde_CellHostMicrobe2007:::CDC1551.ctrl..vs.24.hr.after.macrophage.infection Rohde_CellHostMicrobe2007:::CDC1551.ctrl.vs.pH.5.5.7H9.broth.for.2.hr
RV1160 0.675 -1.725 NA -0.075 0.475 NA NA -1.675 -0.443236784798905 -0.635948430363647 NA 0.0192711645564742 2.40889556955927 -0.019271164556474 1.05991405060608 -0.0963558227823706 NA NA 1.32971035439672 2.9099458480276 0.926907546765382 1.31965583375856 0 1.99414659323515 -1.57892155059294 -1.02706547465754 1.11904148731344 -0.0153293354426499 2.59065768980783 -2.46802300626663 -2.55999901892253 -0.628502753148646 -1.76287357590474 0.383233386066247 0.689820094919245 0.505868069607446 0.873772120231044 NA NA NA NA NA -0.05 0.3 0.05 -0.3 -0.9 0.205279796362442 1.99414659323515 -0.0293256851946346 0.263931166751711 -0.615839389087326 -1.34898151895319 0.205279796362442 -0.205279796362442 1.40763288934246 -0.293256851946346 -1.08505035220148 -0.586513703892691 -1.02639898181221 -0.938421926228306 -0.645165074281961 0.234605481557077 -0.293256851946346 0.645165074281961 0.0586513703892692 0.469210963114153 0.0586513703892692 1.73021542648344 0.234605481557077 2.17010070440296 -1.34898151895319 -2.75661440829565 -0.234605481557077 -0.85 0 1.575 0.175 -0.212997081939977 NA -0.674490759476595 0.922987355073235 0.780989300446584 1.9169737374598 NA 0.367904050623597 1.65556822780619 1.22634683541199 1.16502949364139 0.337245379738298 -0.490538734164797 -2.14610696197099 -1.53293354426499 0.705149430361895 -1.44095753160909 -1.87017892400329 0.306586708852998 0.674490759476595 -1.07305348098549 -2.82059772144758 0.183952025311799 1.04239481010019 0.183952025311799 -0.0306586708852998 -0.674490759476595 NA -1.16502949364139 -0.306586708852998 -0.337245379738298 -1.80886158223269 NA -2.91257373410348 -0.919760126558994 NA -0.613173417705996 1.16502949364139 0.153293354426499 0.287017344458126 0.0321186075941236 -0.345892697167485 1.69487421612067 -0.588017585184724 NA -0.764422860740141 -1.03421916453078 NA -0.314762354422411 -0.674490759476595 -2.28042113918277 0.417541898723607 0.963558227823707 -0.706609367070719 NA 1.12415126579433 -1.98492994931684 -0.65557980360342 1.09053178868646 -2.97900085435496 0.168622689869149 0.131150981009338 0.543339778467257 -2.30451009487837 -0.168622689869149 -1.14068290205601 -0.128946762841114 1.70228620248855 -0.256948860752989 1.0920326582002 1.15626987338845 -1.02779544301195 0 1.2205070885767 1.50957455692381 0.770846582258966 0.610253544288348 0.353304683535359 0.513897721505977 2.1840653164004 2.53736999993576 0.0642372151882471 -0.578134936694224 -1.6380489873003 -1.41321873414144 -3.78999569610658 -4.75355392393029 -1.99135367083566 -3.75787708851246 -1.34898151895319 -1.57381177211206 1.67016759489443 -2.02347227842978 -2.50525139234164 0.578134936694224 -0.192711645564741 -0.546016329100101 0.578134936694224 1.12415126579433 -0.256948860752989 0.546016329100101 0.513897721505977 0.224830253158865 0.835083797447213 -0.0321186075941236 0.80296518985309 0.80296518985309 -1.02779544301195 -2.11982810121216 -2.40889556955927 -1.67016759489443 -1.7665234176768 -1.28474430376494 -1.67016759489443 -0.321186075941236 0.44966050631773 -0.44966050631773 -1.44533734173556 -1.25262569617082 -0.674490759476595 -0.738727974664842 0.192711645564741 0.256948860752989 -0.128474430376494 0.353304683535359 3.59728405054184 -0.481779113911854 -1.60593037970618 -0.364071716762935 -1.55337265818852 -1.55337265818852 -0.816988807253341 -0.16129126857049 -0.674490759476595 -1.275 -1.225 -1.11515805566797 -0.485633346823149 2.78875987091285 0.0648548807189034 NA NA 0.600573963917516 -1.32126272061854 -1.33974191950831 0.36034437835051 -0.212510787232352 -0.452740372799358 -0.489698770578898 NA NA -1.19909468351395 1.10121995644575 -0.353005386302418 0.185542941600712 -0.674490759476595 0.660594753338409 -0.674490759476595 0.742593805067345
RV1205 0.27300816455005 -0.62631284808541 1.52563386072087 0.208770949361803 1.07597335440314 NA 0.722668670867781 -0.465719810114792 -0.101809925958731 -0.53450211128334 -0.916289333628582 -0.865384370649217 1.22171911150478 0.738121963200802 1.01809925958731 -0.53450211128334 1.55260137087065 NA 0.687217000221437 0.0509049629793657 0.45 0.778258568626841 -0.674490759476595 1.1414459006527 -0.85198832775991 -0.283996109253303 0.283996109253303 0.461493677536618 -0.0709990273133258 -0.390494650223292 -1.17148395066988 -0.0354995136566628 -1.06498540969989 0.461493677536618 0.745489786789921 0.141998054626652 0.780989300446584 0.918702931011225 1.1512859515204 1.13965680049494 NA -0.360503681789215 NA NA NA NA -0.7 0.674490759476595 1.71688556957679 0.827784113903094 1.04239481010019 0 -0.0306586708852997 0 -2.29940031639748 0 -1.16502949364139 0.613173417705996 -1.37964018983849 -0.643832088591295 -0.705149430361895 -0.183952025311799 0.0306586708852998 -0.153293354426499 0.337245379738298 0.337245379738298 0.950418797444293 0.582514746820696 0.337245379738298 0 0.735808101247195 -1.62490955692089 0.0613173417705996 -0.797125443017794 -0.75 -0.6 0.4 0.4 -0.494626556949503 -2.24830253158865 -0.854354962003687 0.719456810108368 0.044966050631773 0.224830253158865 1.30401546832142 0.87287039461677 -0.23805556216821 2.89634267304656 1.03157410272891 1.07125002975695 0.357083343252315 -1.86476857031765 -1.34898151895319 3.25342601629887 -1.86476857031765 -2.3805556216821 0.47611112433642 0.07935185405607 -2.97569452710263 NA 0.753842613532665 0.436435197308385 0.753842613532665 0.198379635140175 -1.11092595678498 -0.23805556216821 -3.88824084874743 0 -0.436435197308385 0.07935185405607 -0.47611112433642 -2.57893525682228 -0.95222224867284 0.198379635140175 -1.94412042437372 0.119027781084105 2.10282413248586 1.19027781084105 0.674490759476595 0.15 0.95 NA NA -0.25 0.3 NA -0.4 -2.25 -1.91105715185035 0.51710958226539 -0.0674490759476595 -2.76541211385404 0.96677008858312 1.55132874679617 -3.22661795749614 -0.804200520914402 0.544780998038788 -1.34898151895319 0.821119185449768 0.469210963114153 0.879770555839037 -1.524935630121 -0.421556724672872 -1.55132874679617 -0.489005800620531 0.374717088598108 -0.0749434177196217 1.12415126579433 0.861849303775649 -0.524603924037352 0 1.01173613921489 NA -0.149886835439243 -0.112415126579433 0.224830253158865 0.637019050616784 1.01173613921489 0.487132215177541 -0.44966050631773 -1.27403810123357 -0.89932101263546 -1.27403810123357 -3.26003867080354 -2.09841569614941 -1.57381177211206 -2.58554791132695 -0.262301962018676 -1.12415126579433 1.386453227813 -2.69796303790638 -1.98600056956997 NA -2.772906455626 0.337245379738298 -0.0374717088598108 1.34898151895319 0.0374717088598109 -0.374717088598108 0.0374717088598109 -0.149886835439243 0.974264430355082 0.562075632897163 0.374717088598108 0.374717088598108 -0.749434177196217 -1.94852886071016 -1.94852886071016 -1.46139664553262 -2.28577424044846 -1.19909468351395 -0.487132215177541 -0.674490759476595 -1.19909468351395 -0.299773670878487 -0.599547341756974 -0.637019050616784 0.562075632897163 -0.262301962018676 1.08667955693451 1.08667955693451 -0.412188797457919 0.337245379738298 2.32324594930827 -0.824377594915839 -0.674490759476595 0.575300941906508 -1.22995373786909 -1.38865744598123 -2.2697149366514 -0.890327802509106 -0.4 -0.25 0.4 0.0245269367082398 -0.0245269367082398 0.818234691824066 0.165858383477851 -0.674490759476595 NA NA -1.10875193338618 -1.12723113227595 0.591334364472631 0.258708784456776 1.05331433671687 0.776126353370329 -1.0481950991866 -0.464851739639275 -0.25 0.220990235 -1.07405551 0.87653852 0.251228445 0.046371239714016 -1.30704795224179 -1.18053651368875
RV1206 -0.186782056470442 -0.664113978561571 NA -0.311303427450736 0.830142473201963 -0.332056989280785 0.394317674770933 0.0622606854901473 -0.429221392394197 0.674490759476595 -1.20590772148846 -0.674490759476595 1.00151658225313 1.16502949364139 0.306586708852998 0.183952025311799 -0.102195569617666 -0.51097784808833 -0.183952025311799 2.51401101259458 2.2 0.505868069607446 -0.393452943028014 0.702594541121453 -0.515787051364455 -0.87287039461677 0.595138905420525 -0.71416668650463 1.90444449734568 -1.4680093000373 0.277731489196245 -0.039675927028035 0.71416668650463 0.31740741622428 0.119027781084105 -0.15870370811214 0 1.22171911150478 0.610859555752388 0.979920537352789 0 -0.979920537352789 NA NA NA NA 0.0749999999999999 0.578134936694224 1.44533734173556 -0.674490759476595 -0.770846582258966 -0.433601202520668 -0.289067468347112 0.337245379738298 -3.22792006320942 0.385423291129483 -1.10809196199726 -1.34898151895319 0.240889556955927 -0.289067468347112 -0.770846582258966 -0.963558227823707 0.770846582258966 -0.578134936694224 0.433601202520668 0.578134936694224 1.01173613921489 0.192711645564742 0.578134936694224 0.0481779113911854 0.722668670867781 -1.49351525312675 -0.722668670867781 -0.433601202520668 -0.1 -0.15 -0.245269367082398 0.613173417705996 0.0430526016687189 -0.61708729058497 -1.53554279285097 0.904104635043095 1.27722718283866 1.99477054398397 2.68361217068347 1.34898151895319 2.05719681640362 1.58505328477 0.472143531633617 0.674490759476595 -0.472143531633617 -1.51760420882234 -1.07918521516255 1.21408336705787 -0.0337245379738298 -4.24929178470255 -0.101173613921489 0.303520841764468 -2.52934034803723 -3.10265749359234 0.741939835424255 0.134898151895319 0.337245379738298 1.21408336705787 -1.95602320248213 -0.303520841764468 -5.6657223796034 0.0674490759476595 -1.18035882908404 -2.56306488601106 -0.607041683528936 -2.59678942398489 -0.539592607581276 -0.0337245379738298 -0.236071765816808 2.52934034803723 0.910562525293404 0.313156424042705 -0.240889556955927 -1.04239481010019 0.981077468329593 -0.735808101247195 -1.50227487337969 -0.834238570931578 -0.621241488991601 -1.04723565287156 0.0177497568283314 -1.65072738503482 -1.35 0.3 0.6 -1.15 1.2 1.4 -0.608147406085455 -0.950921398606347 0.464403473737984 -3.13357165340168 0.463712397140159 0.660438868654166 0.210778362336436 -4.3982418274203 0.487132215177541 0.0936792721495271 0 NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA NA -1.13048451236218 -0.864731742918712 -1.66028494640393 -3.01053192644431 -2.43566107588771 -0.674490759476595 -1.925 0.125 -0.457690158216261 -0.505868069607446 0.89932101263546 -0.674490759476595 -0.715368987323662 NA -0.769156129227696 -0.0118331712188876 0.0591658560944381 1.3371483477343 0.0828321985322134 1.45548005992318 1.02948589604322 0.319495622909966 0 -0.325 1.2342003875 -0.2025040075 1.25835543 -2.030418145 0.2175 0.11575 -0.71975
RV1556 NA NA NA NA NA NA NA NA -1.12415126579433 -0.674490759476595 -0.799396455675965 -1.34898151895319 0.849358734155712 0.824377594915839 0.599547341756973 -0.974264430355082 0.249811392398739 0.0749434177196216 -0.499622784797478 1.17411354427407 0.539592607581276 1.31525698097936 -0.236071765816808 0.674490759476595 -2.66049132904657 -3.67222746826146 0.524603924037352 0.149886835439243 2.39818936702789 -1.68622689869149 -0.599547341756974 -2.09841569614941 -2.13588740500922 1.23656639237376 0.337245379738298 -0.0374717088598109 0.337245379738298 NA NA NA NA NA 0.32258253714098 0.0293256851946346 -0.32258253714098 -0.0293256851946346 NA 1.36942063287672 -0.797125443017794 1.57381177211206 0.878881898711927 -0.0204391139235332 -0.878881898711927 0.470099620241263 -1.41029886072379 0.551856075935396 -3.00454974675938 -1.16502949364139 -0.347464936700064 -0.224830253158865 0.347464936700064 -0.347464936700064 1.04239481010019 -0.96063835440606 0.224830253158865 -0.224830253158865 1.32854240502966 1.08327303794726 1.20590772148846 0.756247215170728 1.65556822780619 -2.80015860752405 -1.00151658225313 -0.0204391139235332 -0.994873870227978 -0.75880210441117 0.421556724672872 NA -0.089932101263546 -0.44966050631773 -0.44966050631773 0.224830253158865 0.089932101263546 2.65299698727461 1.57381177211206 0.539592607581276 1.10371215187079 0.932023594913113 0.686754227830715 NA 0.0490538734164796 -1.29992764553671 -0.981077468329593 1.12823908857903 -0.539592607581276 -2.2810051138663 0.686754227830715 1.00560440503783 -1.10371215187079 -1.71688556957679 0.171688556957679 1.47161620249439 0 0.220742430374158 NA 0.367904050623597 -1.17729296199551 0.490538734164797 0.515065670873036 -0.981077468329593 -0.245269367082398 -1.07918521516255 -0.318850177207118 0.686754227830715 -1.34898151895319 2.08478962020039 0.392430987331837 0.465166041018341 0.0899321012635461 NA NA NA NA NA -1.3 -0.2 -0.1 NA -1.7665234176768 0.385423291129483 0.256948860752989 NA 1.54169316451793 0.610253544288348 -2.22105037969061 -1.97459613643873 0.664715531078384 -1.62299338999056 1.03281397544854 1.20143666531769 0.906346958046675 -1.79161607985971 -1.11092595678498 -0.674490759476595 NA 2.35322331639612 -1.30401546832142 NA 0.884332329091536 -1.33399283540927 0.224830253158865 1.21408336705787 1.12415126579433 1.48387967084851 0.224830253158865 -0.134898151895319 -0.164875518983168 1.45390230376066 1.93354017716624 0.5545812911252 0.614536025300898 -0.914309696179385 -1.00424179744293 -1.00424179744293 -3.01272539232879 -2.92279329106525 -2.29326858222042 -0.644513392388747 -0.734445493652293 1.24406073414572 -1.7236986075513 -1.57381177211206 0.854354962003687 -1.27403810123357 -0.5545812911252 0.34473972151026 2.14338174678118 0.194852886071016 -0.254807620246714 0.704468126564444 -0.10492078480747 0.584558658213049 -0.614536025300898 0.194852886071016 0.194852886071016 -0.944287063267233 NA -2.71295172145031 -2.772906455626 -2.59304225309891 -1.783653341727 -2.20333648095688 -1.09417389870648 -0.854354962003687 -0.0749434177196217 -0.434671822773806 -1.27403810123357 -0.524603924037352 -0.314762354422411 -0.254807620246714 0.0149886835439243 -0.464649189861655 -0.0149886835439244 6.04043946820151 -0.464649189861655 -0.914309696179385 -1.5463934485561 -0.540997796663519 -0.540997796663519 -0.433601202520668 -1.99938332273419 -0.5 -0.25 -0.9 0 -0.4 NA -0.674490759476595 -1.21408336705787 NA 1.28153244300553 -0.944287063267233 -0.96677008858312 1.30401546832142 0.562075632897163 0.674490759476595 0.269796303790638 NA -1.50368123442947 -0.5 3.06094957499821 -1.1152426769191 NA NA 0.0475 -0.10975 0.37825
RV1924C 0.674490759476595 0.179864202527092 NA 0 -0.089932101263546 NA NA -1.61877782274383 0.357083343252315 -1.07125002975695 -0.07935185405607 0.71416668650463 0.119027781084105 0.7935185405607 1.03157410272891 -1.03157410272891 0.87287039461677 -1.03157410272891 0.674490759476595 0.674490759476595 0.779879940644813 0.975 -0.175 1.625 -0.188857412653447 -1.69971671388102 0.161877782274383 -1.24106299743694 1.88857412653447 -1.34898151895319 -2.21232969108323 -1.16012410629974 -3.61527047079455 0.161877782274383 -0.161877782274383 -0.0539592607581276 0.539592607581276 NA NA NA NA NA -0.0421556724672872 0.0421556724672872 0.0421556724672872 -0.0421556724672872 -0.967747611422941 0.32258253714098 2.78594009349028 0.146628425973173 0.498536648308788 -1.17302740778538 -1.7008897412888 0.351908222335615 -1.55426131531563 0.498536648308788 -0.615839389087326 -0.381233907530249 0.351908222335615 -0.0293256851946346 -0.527862333503422 -0.997073296617575 0.469210963114153 -0.674490759476595 0.879770555839037 0.674490759476595 1.11437603739611 0.997073296617576 1.43695857453709 0 0.498536648308788 -0.615839389087326 -0.615839389087326 -0.909096241033672 0.15 -0.7 -0.255841322560088 0.255841322560088 -0.536839584073208 -1.58298851713895 -0.481779113911854 0.0137651175403387 -0.123886057863048 1.33521640141285 1.00485358044472 0.944287063267233 0.438418993659787 0.303520841764468 -0.202347227842979 0.741939835424255 -1.2478079050317 -1.88857412653447 -1.78740051261298 2.69796303790638 -1.41643059490085 -0.101173613921489 0.607041683528936 0.876837987319574 -2.1583704303251 -3.77714825306893 0.303520841764468 0.505868069607446 NA 1.51760420882234 -1.11290975313638 NA -2.59678942398489 -0.134898151895319 -0.404694455685957 -1.34898151895319 NA -1.28153244300553 -0.674490759476595 0.370969917712127 -0.370969917712127 0.505868069607446 0.404694455685957 0.139549812305502 0.05 -1.1 -0.35 0.05 -0.9 NA NA NA NA NA NA NA NA NA NA NA 0.418649436916507 -1.26467017401862 1.55975988128963 -0.605312220043098 -0.0518839045751227 0.397776601742608 1.02038345664408 -0.57072295032635 -1.16382719282236 -1.21672842885974 -0.39675927028035 0.584558658213049 0 3.01272539232879 -0.0449660506317731 -0.629524708844822 0.269796303790638 0.584558658213049 0.809388911371914 0.584558658213049 0.854354962003687 0.089932101263546 0.629524708844822 0.89932101263546 0.44966050631773 -1.30401546832142 -0.989253113899006 -0.224830253158865 -0.269796303790638 -3.73218220243716 -2.47313278474752 -2.06843832906156 -1.75367597463915 -0.944287063267233 -1.75367597463915 1.25904941768964 -1.61877782274383 -1.43891362021674 0.89932101263546 -1.07918521516255 -0.44966050631773 0.0449660506317731 0.89932101263546 -1.21408336705787 -0.44966050631773 0.134898151895319 -1.43891362021674 0.224830253158865 -0.854354962003687 0.494626556949503 0.494626556949503 -0.89932101263546 -1.34898151895319 -4.67646926570439 -1.21408336705787 -1.34898151895319 -0.989253113899006 -4.09191060749134 0.179864202527092 -0.179864202527092 -0.359728405054184 -2.06843832906156 -1.79864202527092 0 -0.539592607581276 0.494626556949503 0.0449660506317731 0.089932101263546 0.674490759476595 2.06843832906156 -0.134898151895319 -0.809388911371914 -0.585100417859215 -0.936792721495271 -1.19909468351395 -0.949793110283369 -0.190616953765125 0.0749434177196217 NA NA -0.168622689869149 -0.26497851265152 1.93232487850052 -0.601572839533179 -0.127606359900977 NA 0.3607741271619 -1.55289732995774 -1.77249897257803 0.486260780087778 0.141172484541613 0.392145790393369 0.486260780087778 -0.109673294223837 -0.866419024368309 -0.427177481001844 1.4172035675 -0.3312377725 0.387148275 -0.520080555 0.6575 -0.749318434466148 1.48474774132403
RV1962C NA NA NA NA NA NA NA NA 0.0674490759476595 -2.1583704303251 0.775664373398084 -0.843113449345744 0.607041683528936 0 -0.472143531633617 -0.573317145555106 0.539592607581276 NA 0.843113449345744 0.809388911371914 0.6012902119365 0.725 -0.0750000000000001 1.625 -1.10048492335655 -0.638991245819932 1.02948589604322 -1.77497568283314 1.70397665551982 -1.17148395066988 -0.461493677536618 -0.780989300446584 -3.08845768812967 0.674490759476595 0.745489786789921 0.106498540969989 -0.141998054626652 NA NA NA NA NA NA NA NA NA -2.31575160753631 0.71416668650463 NA 1.22995373786909 NA NA -2.18217598654193 -0.15870370811214 -0.833194467588735 0.7935185405607 -1.15060188381302 -2.02347227842979 -0.119027781084105 0.55546297839249 0 -0.436435197308385 0.63481483244856 -0.71416668650463 0.119027781084105 0 0.991898175700875 0.436435197308385 -0.039675927028035 0.595138905420525 1.07125002975695 -1.78541671626158 -0.87287039461677 -0.63481483244856 NA NA NA NA -0.524603924037352 -1.19909468351395 -0.324754810118361 0.599547341756973 0.44966050631773 0.624528480996847 0.824377594915838 0.741939835424255 0.472143531633617 -0.404694455685957 -0.775664373398084 -0.607041683528936 -0.910562525293404 -0.607041683528936 -0.539592607581276 1.78740051261298 -0.303520841764468 -0.876837987319574 0.607041683528936 1.14663429111021 0 -2.73168757588021 0.472143531633617 1.68622689869149 0.843113449345744 1.01173613921489 0.0674490759476595 -0.0674490759476595 NA -0.741939835424255 0.337245379738298 -1.34898151895319 -0.607041683528936 -1.58505328477 -0.809388911371914 0.202347227842979 -0.674490759476595 0.944287063267233 2.05719681640362 0 NA -0.734004650018648 0.95222224867284 NA NA NA -0.562075632897163 NA -0.487132215177541 NA -0.805362100867577 0.986568573562781 0.0201340525216894 -1.7113944643436 0.68455778573744 1.10737288869292 -1.63926868125957 0.0306586708852998 1.56359221515029 -0.515787051364455 1.4680093000373 1.86476857031765 1.30930559192516 -2.10282413248586 -1.07786268426162 -1.23656639237376 -0.469498469831748 1.18035882908404 -0.112415126579433 2.27640631323351 2.30451009487837 -1.43329286388776 0.224830253158865 1.37708530059805 0.0562075632897163 0.224830253158865 0.281037816448581 0.674490759476595 0.477764287962588 0.562075632897163 1.09604748414947 -0.75880210441117 -0.786905886056028 NA NA NA -1.48950042717748 -1.32087773730833 -1.5457079904672 -0.477764287962588 0.0281037816448581 -0.168622689869149 -1.23656639237376 -1.15225504743918 1.18035882908404 -2.05157606007464 -1.46139664553262 -0.112415126579433 0.196726471514007 -0.843113449345744 -0.224830253158865 0.112415126579433 -0.505868069607446 -0.168622689869149 -0.955528575925177 0.505868069607446 0.505868069607446 -0.365349161383156 -1.71433068033635 -1.65812311704663 -2.33261387652322 -3.00710463599982 -1.37708530059805 NA -0.421556724672872 -0.309141598093439 0.505868069607446 -0.140518908224291 -1.06794370250461 -0.674490759476595 -0.337245379738298 0.393452943028014 1.32087773730833 -0.0281037816448581 0.0281037816448581 3.11951976257925 0.309141598093439 -0.786905886056028 -1.38448103260985 -0.102195569617666 -0.51097784808833 -1.89431447342363 -1.90488049654379 0 -0.225 -1.275 -0.628762572393436 0.217208888645005 1.31252255898148 -2.91671679773663 -0.619802319519033 3.31776535742541 0.985794186927331 -0.34243377019581 -0.383940893855908 0.944287063267233 -0.0103767809150245 1.29709761437807 1.04805487241748 -0.44966050631773 -0.157381177211206 -0.225 2.00314981808518 -0.56504586930848 0 -0.749449327217288 -0.25 -0.0833020704404671 2.13454170568374
[+] Show/hide bicluster #578 motif PSSM #1. bicluster 578 motif PSSM #1 Mycobacterium tuberculosis H37Rv 10x4
POSITION A C G T
1 0.75 0 0 0.25
2 0 0 1 0
3 0 0 0.25 0.75
4 0 0 1 0
5 0.25 0.5 0 0.25
6 0 0 1 0
7 0 1 0 0
8 1 0 0 0
9 1 0 0 0
10 0 1 0 0 [+] Show/hide bicluster #578 motif PSSM #2. bicluster 578 motif PSSM #2 Mycobacterium tuberculosis H37Rv 6x4
POSITION A C G T
1 0 0 0 1
2 0 0 1 0
3 0 0 0.4 0.6
4 0.8 0 0 0.2
5 0.8 0 0 0.2
6 1 0 0 0 |