Bicluster 596 (zzz

GENES 2885:::H37Ra..7H9.roll.replicate.1 2885:::H37Rv..7H9.roll.replicate.3 2885:::Strain.9802501..replicate1 2885:::Strain.9802826..replicate.4 4060:::H37Rv.sigE.null.0.05..SDS.exposure.for.1h.rep.1 4062:::H37.Rv3132.34.KO.0.days.vs.Rv3132.34.KO..complemented..hypoxia.4.day.rep.2 4062:::H37.Rv3132.34.KO.0.days.vs.Rv3132.34.KO..complemented..hypoxia.4.day.rep.3 4062:::H37Rv.0.day.ctrl.vs.Rv3132.34.KO.hypoxia.4.day.rep.2 4062:::H37Rv.0.day.ctrl.vs.Rv3132.34.KO.hypoxia.4.day.rep.3 4062:::H37Rv.Ctrl.vs.0.05.mM.DETA.NO.40min.rep.2 4062:::H37Rv.ctrl.vs.Rv3132.3134.KO..0.05.mM.DETA.NO.40min.rep.2 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.1hr.rep.4 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.24hrs.rep.2 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.DETA.NO.5min.rep.2 4062:::MTB.strain.1254.Ctrl.vs.2hr.Hypoxia.rep.2 4062:::MTB.strain.1254.Ctrl.vs.5.0.mM.DETA.NO.40min.rep.4 4062:::MTB.strain.1254.Ctrl.vs.high.aeration...0.001.mM.DETA.NO.rep.1 4062:::MTB.strain.1254.Ctrl.vs.high.aeration...0.001.mM.DETA.NO.rep.3 4062:::MTB.strain.1254.Ctrl.vs.low.aeration...0.001.mM.DETA.NO.rep.3 4062:::MTB1254.Day.0.vs.low.Oxygen.Day.4.rep.3 4062:::MTB1254.Day.0.vs.low.Oxygen.Day.4.rep.5 4068:::H37Rv.SDS.treated.vs..H37Rv.delta.mprAB.mutant.SDS.treated.rep.5 4068:::H37Rv.vs..H37Rv.SDS.treated.rep.3 4068:::H37Rv.vs..H37Rv.SDS.treated.rep.4 4082:::H37Rv.wild.type.Vs.Rv3676.null.7 4082:::Rv3676.null.Vs.H37Rv.wild.type.7 4089:::MTB1254.control.vs..25.ug.ml.Streptomycin.for.15.min.rep.2 4089:::MTB1254.ethanol.vs..0.5.ug.ml.Tetracyclin.for.30.min.rep.3 4089:::MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.24.hr.rep.3 4089:::MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.24.hr.rep.4 4089:::MTB1254.ethanol.vs..5.0.ug.ml.Erythromycin.for.15.min.rep.4 4099:::H37.Rv3133c.DosR.mutant.2hr.rep.3 4100:::H37Rv.0.2..Oxygen..2h..4 4100:::H37Rv.0.2..Oxygen..2h..6 4101:::H37Rv.Day14.1 4107:::DIPED..100ug.mL..DMSO..12h..2 4107:::DIPED..50ug.mL..DMSO..12h 4107:::DIPED.10ug.mL.vs.DMSO.12h.2 4107:::DIPED.50ug.mL.vs.DMSO.12h.2 4107:::EMB..10ug.mL..DMSO..12h 4107:::EMB.10ug.mL.vs.DMSO.12h.2 4107:::EMB.10ug.mL.vs.DMSO.12h.3 4107:::pH4.8vspH6.8..2h.B 4107:::pH4.8vspH6.8..5h. 4107:::pH5.2vspH6.8..2h. 4107:::pH5.6vspH6.8..2h. 4107:::pH5.6vspH6.8..2h.A 4107:::Rif.5ug.mL.vsDMSO.2.5h 4107:::WT.t.0h.WT.t.6h..2 4107:::X.241..0.1ug.mL..DMSO..12h..1..GEO.acc.GSM28046. 4107:::X.241..1ug.mL..DMSO..12h..1 4107:::X0.05mM.Palmitate.10mM.Gluc..2 4107:::X0.05mM.palmitatevs10mM.gluc 4107:::X0.12mg.mL.Nam.pH5.6..2h..2 4107:::X0.12mg.mL.PZA.pH5.6..4h..1 4107:::X0.12mg.mL.PZA.pH5.6..4h..2 4107:::X0.12mg.mL.PZA.pH5.6..5h. 4107:::X0.12mg.mL.PZAvspH5.6..6h. 4107:::X0.1mMGSNO.10ug.mLmdvsDMSO.6h 4107:::X0.1mMGSNO.20ug.mLCPZvsDMSO.6h 4107:::X0.1mMGSNO.20ug.mLCPZvsDMSO.6hA 4107:::X0.1ug.mL.Mtmvsctrl..1.5h. 4107:::X0.2ug.mL.Mtmvsctrl..0.33h. 4107:::X0.2ug.mL.Mtmvsctrl..0.75h. 4107:::X0.5ug.mL.CeruleninvsDMSO..6hA 4107:::X0.5uMValinomycinvsDMSO.6h 4107:::X100ug.mL.Cephalexin.Ctrl..6h 4107:::X100ug.mL.TriclosanvsEtOH..6h 4107:::X100ug.mLCephalexinvsEtOH.6h 4107:::X100ug.mLCephalexinvsEtOH.6hA 4107:::X10mM.succinatevs10mM.glucose 4107:::X10ug.mL..241vsDMSO..6h 4107:::X10ug.mL.ChlorprovsEtOH 4107:::X10ug.mL.ChlorprovsEtOH..6h 4107:::X10ug.mL.menadionevsDMSO..6h 4107:::X10ug.mL.TRZ.DMSO..6h..2 4107:::X10ug.mLchlorpromazinevsctrl.6h 4107:::X10ug.mLchlorpromazinevsctrl.6hA 4107:::X10uM.ValinomycinvsDMSO..6h 4107:::X150uM.Deferroxaminevsctrl..6hB 4107:::X1mM.DTNBvsDMSO..6h 4107:::X1ug.mL..111891.DMSO..12h..1 4107:::X1ug.mL..59vsDMSO..6h 4107:::X1uM.ValinomycinvsDMSO..6h 4107:::X1uM.ValinomycinvsDMSO..6h.A 4107:::X1uM.ValinomycinvsDMSO..6h.B 4107:::X20ug.mL.chlorprmz.DMSO..6h..2 4107:::X20ug.mL.CPZvsDMSO..6h 4107:::X20ug.mL.KCN.DMSO..6h 4107:::X20uM.DCCD.DMSO..6h..1 4107:::X24ug.mL.Econazole.DMSO..6h..2 4107:::X250uM.DeferroxaminevsDMSO..6h 4107:::X25ug.mLCPZ.0.1mMGSNO.DMSO..1 4107:::X25ug.mLCPZ.0.1mMGSNO.DMSO..2 4107:::X25ug.mLCPZ.0.1mMGSNO.DMSO..3 4107:::X2mM.DTTvsDMSO..6h 4107:::X2mMb.mercaptoethanolvsDMSO.6h 4107:::X2ug.mL..111891vsDMSO..6h 4107:::X2ug.mL..111895vsDMSO..6hA 4107:::X4mM.H2O2vsctrl..2h.A 4107:::X50ug.mL.TriclosanvsEtOH..6hA 4107:::X60ug.mL.ChlorprovsEtOH..6h 4107:::X7d.Dubos.NRP.1vsDubos.log.phase 4107:::X9ug.mLAscidideminNpvsDMSO.6h 4363:::H37Rv.hypoxia.4hr.rep.5 4365:::H37Rv.diamide.1h.rep.2 4396:::Strain.27.cDNA.Cy3.vs.H37Rv.gDNA.Cy5..DS..rep.1 4489:::MTB1254.WT.vs.Rv3662c.3665c.KO.in.7H9OADC..OD.1.5.3 4489:::MTB1254.WT.vs.Rv3662c.3665c.KO.in.7H9OADC.Exp2..OD.0.3.4 4523:::H37Rv.sigB.null.mutant.control.vs.0.05..SDS.for.60.min.rep.1 4523:::H37Rv.sigB.null.mutant.control.vs.0.05..SDS.for.60.min.rep.3 4523:::H37Rv.sigB.null.mutant.control.vs.5mM.Diamide.for.60.min.rep.4 4523:::H37Rv.sigB.null.mutant.control.vs.5mM.Diamide.for.60.min.rep.6 4523:::H37Rv.wild.type.control.vs.0.05..SDS.for.60.min.rep.2 4523:::H37Rv.wild.type.control.vs.0.05..SDS.for.60.min.rep.3 4523:::H37Rv.wild.type.vs.H37Rv.sigB.null.mutant.rep.1 4523:::H37Rv.wild.type.vs.H37Rv.sigB.null.mutant.rep.2 4523:::H37Rv.wild.type.vs.H37Rv.sigB.null.mutant.rep.4 4523:::H37Rv.wild.type.Vs.H37Rv.wild.type.rep.4 4523:::H37Rv.wild.type.Vs.H37Rv.wild.type.rep.5 4575:::Whole.Lung.Surfactant.30min.rep.3 4581:::H37Rv.Ctrl.vs.5.ug.ml.garlic.extract.6hrs 4583:::X0.13mg.ml.TLM.vs.DMSO.6hrs.rep.2 4583:::X0.5ug.mL.Cerulenin.vs.DMSO..6hrs.rep.4 4583:::X5ug.ml.KCN.vs.DMSO.6hrs.rep.1 4599:::H37Rv.grown.in.7H9.vs.H37Rv.24hrs.after.infection.in.macrophages.rep.2 4615:::Acetate.3mM.60m.02 4615:::CHP.AA.30m.1 4615:::CK.4h.for.AA.NA.0.03mM 4615:::CK.for.MDG.OA.Na.24h 4615:::CK.for.OA.NA..2h 4615:::CK.PA.Na.2h.01 4615:::Glucose_20mM_1h.OA_50uM_10min 4615:::L2A_30uM_4h_04 4615:::MDG.MD.glycerol 4615:::MDGCy3.7H9Cy5.02 4615:::MTB1254_Bottom_10D_03 4615:::MTB1254_Bottom_10D_04 4615:::MTB1254_Bottom_14D_01 4615:::MTB1254_Bottom_14D_02 4615:::MTB1254_Bottom_14D_04 4615:::MTB1254_Bottom_21D_02 4615:::MTB1254_Bottom_21D_03 4615:::MTB1254_Bottom_42D_03 4615:::MTB1254_Pellicle_10D_01 4615:::MTB1254_Pellicle_14D_01 4615:::MTB1254_Pellicle_14D_02 4615:::MTB1254_Pellicle_21D_01 4615:::MTB1254_Pellicle_42D_03 4615:::MTB1254_Pellicle_56D_02 4615:::MTB1254.Rv3524.2._PA50.OA30_30m_01 4615:::MTB1254.Rv3524.2.compl._PA50.OA30_30m_02 4615:::MTB1254whiB4_SDS_90MIN_04 4615:::OA_50uM_2h..1.0..BSA.10mMGlu._30.min._01 4615:::OA_50uM_4h_01 4615:::OA_50uM_4h_07 4615:::PA_300uM_2h_T0_01 4615:::PA_300uM_4h_T0_01 4615:::PA_50uM_10.min_02 4615:::PA_50uM_10.min_03 4615:::PA_50uM_24h_02 4615:::PA_50uM_24h_08 4615:::PA_50uM_3d_05 4615:::PA_50uM.OA_10uM_24h_02 4615:::PA_50uM.OA_10uM_2h_03 4615:::PA_50uM.OA_10uM_30min_03 4615:::PA_50uM.OA_30uM_2h_04 4615:::PA_50uM.OA_30uM_30min_03 4615:::Rv_Rv3524.1_OA_10min 4615:::Rv.MT71_100703_01 4615:::Rv.MT90_100703_01 4615:::Rv.MT90_100803_01 4615:::Rv.p0485.1._300uM.PA_10m 4615:::Starvation_1254_12h_02 4615:::Starvation_1254_24h_04 4615:::Starvation_1254_24h_07 4615:::Starvation_1254_3d_03 4615:::Starvation_1254_5d_01 4615:::Starvation_1254_6h_05 4615:::Starvation_1254_OA50_12h_02 4615:::Starvation_1254_OA50_24h_01 4615:::Starvation_1254_OA50_24h_03 4615:::Starvation_1254_OA50_5d_03 4615:::Starvation_1254_OA50_6h_01 4615:::Starvation_1254_OA50_6h_02 4615:::Starvation_1254_OA50_6h_03 4615:::Starvation_1254_OA50_6h_04 4615:::Starvation_1254_PA50_24h_01 4615:::Starvation_1254_PA50_24h_02 4615:::Starvation_1254_PA50.OA30_24h_02 4615:::Starvation_1254_PA50.OA30_6h_03 4615:::Starvation_1254_PA50.OA30_6h_04 4615:::Starvation_OA50_6h_02 4615:::Starvation_T0 4615:::TBD091 4615:::TBD094 4615:::TBD1114 4615:::TBD1277 4615:::TBD425 4615:::TBD817 4615:::TBE736 4615:::Test.4 4615:::Tet_500ng_30M_01 4615:::WT_65.4_SDS_01 4615:::X7H9_MTB1254.3524.1._OA100_10M_01 4615:::X7H9_PA_300uM_4h_T0_01 4699:::CDC1551.Ctrl.vs.clinical.isolate.10517.01_Afri2.rep.2 4699:::CDC1551.Ctrl.vs.clinical.isolate.1500.03_Beijing.rep.3 4699:::CDC1551.Ctrl.vs.clinical.isolate.4850.03_EAI.rep.2 4703:::Clinical.isolate.4850.03_EAI.extra.vs.intracellular.in.resting.macrophages.rep.1 4703:::Clinical.isolate.947.01_EAI.extra.vs.intracellular.in.resting.macrophages.rep.1 4704:::Clinical.isolate.12954.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.2 4704:::Clinical.isolate.1797.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.1 4704:::Clinical.isolate.1797.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.2 4704:::Clinical.isolate.1934.03_Beijing.extra.vs.intracellular.in.activated.macrophages.rep.1 4704:::Clinical.isolate.2169.99_Uganda.extra.vs.intracellular.in.activated.macrophages.rep.2 4735:::H37Rv.dosR.KO.vs.BCG.with.pMFdosR.at.OD.0.4.rep.3 4795:::CDC1551.ctrl.vs.10.ug.ml.Thioridazine.4hr.rep.1 4795:::CDC1551.ctrl.vs.10.ug.ml.Thioridazine.6hr.rep.2 4795:::CDC1551.ctrl.vs.40.ug.ml.Thioridazine.6hr.rep.1 4799:::H37Rv.mouse.hallow.fiber..ctrl.vs.25mg.kg.Isoniazid.3rd.dose.6hrs.rep.1 4802:::H37Rv.ctrl.vs.relE1.overexpression.24.hr.rep.2 4802:::H37Rv.ctrl.vs.relE3.overexpression.6.hr.rep.1 4802:::H37Rv.ctrl.vs.relE3.overexpression.72.hr.rep.5 Maciag_JBacteriol2007:::H37Rv.wild.type.vs.H37Rv.FurB.null.rep.3 Rohde_CellHostMicrobe2007:::CDC1551.ctrl..vs.2.hr.after.macrophage.infection Rohde_CellHostMicrobe2007:::M..bovis.ctrl..vs.24.hr.after.macrophage.infection RV0308 -1.72838257115878 NA 0.843113449345744 -0.590179414542021 -0.4 -1.96726471514007 -1.82674580691578 -3.93452943028014 -3.42866136067269 0.224830253158865 0.590179414542021 0.140518908224291 -2.22019874994379 1.91105715185035 0.75880210441117 0.786905886056028 0 0.421556724672872 0.224830253158865 -1.18035882908404 -0.421556724672872 1.75275830013646 -1.0920326582002 -1.84452575040538 0.843113449345744 -0.843113449345744 0.0717543361145314 0.0430526016687188 -1.10501677616378 1.07631504171797 1.27722718283866 -0.0729179199434157 0.0749999999999999 0.275 NA 0.744265665629346 0.023258302050917 0.0930332082036683 0.721007363578429 0.302357926661922 0.255841322560088 -0.232583020509171 0.534940947171093 0.023258302050917 -0.511682645120176 0.767523967680263 1.86066416407337 0.581457551272927 -0.930332082036683 1.18617340459677 0.023258302050917 -0.581457551272927 2.62818813175363 1.25594831074952 -0.511682645120176 -0.721007363578429 1.55830623741144 1.20943170664769 0.0465166041018341 -1.25594831074952 -0.39539113486559 1.06988189434219 0.604715853323844 0.697749061527512 0.186066416407337 -1.7676309558697 0.441907738967424 -0.302357926661922 0.279099624611005 0.418649436916507 3.09335417277197 -0.302357926661922 -0.55819924922201 -0.372132832814673 0.162808114356419 -1.58156453946236 0.162808114356419 0 -2.46538001739721 0.023258302050917 0.0930332082036683 0.232583020509171 -0.0232583020509171 -2.8607711522628 0.348874530763756 -2.27931360098987 -0.465166041018342 -1.34898151895319 -3.18638738097564 -1.46527302920778 -1.04662359229127 -0.488424343069259 -1.30246491485136 -0.465166041018342 -0.767523967680264 -1.16291510254585 0.209324718458254 -0.186066416407337 -2.60492982970271 -0.604715853323844 -0.348874530763756 -2.60492982970271 0.186066416407337 -1.51178963330961 0.168622689869149 -1.07418898731458 0.511682645120176 -0.856785559335134 0.856785559335134 -1.83076063286504 -0.9876471835193 -0.0722668670867781 0.819024493650151 -1.49351525312675 -1.34898151895319 0.192711645564741 -0.433601202520668 0.770846582258966 1.95120541134301 -0.0240889556955927 -0.134898151895319 -0.142680737581587 -0.219209496829893 0.0843113449345745 -0.320383110751383 -0.674490759476595 0.747408679420011 -0.364589599717078 0.200524279844393 1.33075203896734 -0.127606359900977 0.619802319519033 0.783867639391719 0.346360119731225 0.492195959618056 0.747408679420011 -0.947932959264404 -1.8594069585571 -1.75003007864198 -1.34898151895319 -1.64065319872685 -3.11724107758102 -3.06255263762346 -2.60681563797711 -1.67711215869856 -1.1484572391088 -0.60157283953318 -0.92970347927855 -3.77350235707176 -3.42714223734054 0.747408679420011 0.364589599717078 -0.820326599363427 0.382819079702932 0.966162439250258 0.437507519660494 -0.145835839886831 0.401048559688786 0.729179199434157 0.638031799504887 -0.583343359547326 -0.309901159759517 0.473966479632202 0.0729179199434157 0.41927803967464 -0.583343359547326 0.565113879561472 0.255212719801955 -0.710949719448303 0.565113879561472 0.218753759830247 1.45835839886831 0.802097119377573 -1.03908035919367 -2.05993123840149 -0.911473999292696 -2.64327459794882 -2.40629135813272 -1.71357111867027 -1.23960463903807 -1.75003007864198 -1.56773527878344 -2.29691447821759 -1.69534163868441 -0.729179199434157 -1.31252255898148 -1.47658787885417 -3.13547055756687 -2.49743875806199 -1.49481735884002 -0.145835839886831 -0.966162439250258 -0.674490759476595 -1.42189943889661 0.109376879915124 0.218753759830247 0.692720239462449 0.200524279844393 0.200524279844393 -0.0182294799858539 -0.364589599717078 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