Bicluster 597 (zzz

GENES 2867:::H37Ra..Youman.media.replicate.1 2885:::H37Rv..7H9.roll.replicate.3 2885:::Strain.1006...replicate.3 2885:::Strain.1254...replicate.1 2885:::Strain.1843..replicate.4 2885:::Strain.3160..replicate.1 4060:::H37Rv.0.05..SDS.exposure.for.1h.rep.4 4060:::H37Rv.0.05..SDS.exposure.for.1h.rep.5 4060:::H37Rv.sigE.null.0.05..SDS.exposure.for.1h.rep.6 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.KCN.1hr.rep.2 4062:::MTB.strain.1254.Ctrl.vs.0.5.mM.KCN.20min...0.05.mM.DETA.NO.40min.rep.3 4062:::MTB.strain.1254.Ctrl.vs.high.aeration...0.01.mM.DETA.NO.rep.2 4062:::MTB.strain.1254.Ctrl.vs.low.aeration...0.005.mM.DETA.NO.rep.1 4062:::MTB.strain.1254.Ctrl.vs.low.aeration...0.005.mM.DETA.NO.rep.2 4068:::H37Rv.delta.mprAB.mutant.vs..H37Rv.delta.mprAB.mutant.SDS.treated.rep.6 4068:::H37Rv.vs..H37Rv.delta.mprAB.mutant.rep.2 4082:::H37Rv.wild.type.Vs.Rv3676.null.3 4082:::H37Rv.wild.type.Vs.Rv3676.null.4 4082:::Rv3676.null.Vs.H37Rv.wild.type.3 4082:::Rv3676.null.Vs.H37Rv.wild.type.4 4084:::High.iron.wt.vs.high.iron.ideR.KO.2b 4084:::High.iron.wt.vs.low.iron.wt.2a 4084:::High.iron.wt.vs.low.iron.wt.3a 4089:::H37Rv.whiB7.null.vs..H37Rv.whiB7.null.with.whiB7.over.expression.rep.1 4089:::H37Rv.whiB7.null.vs..H37Rv.whiB7.null.with.whiB7.over.expression.rep.3 4089:::H37Rv.whiB7.null.vs..H37Rv.whiB7.null.with.whiB7.over.expression.rep.5 4089:::H37Rv.wild.type.vs..H37Rv.whiB7.null.with.whiB7.over.expression.rep.3 4089:::H37Rv.wild.type.vs..H37Rv.whiB7.null.with.whiB7.over.expression.rep.5 4089:::MTB1254.ethanol.vs..1.0.ug.ml.Erythromycin.for.30.min.rep.4 4089:::MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.15.min.rep.2 4089:::MTB1254.ethanol.vs..1.0.ug.ml.Tetracyclin.for.30.min.rep.1 4089:::MTB1254.ethanol.vs..25.ug.ml.Tetracyclin.for.15.min.rep.1 4089:::MTB1254.ethanol.vs..25.ug.ml.Tetracyclin.for.15.min.rep.2 4089:::MTB1254.ethanol.vs..5.0.ug.ml.Tetracyclin.for.30.min.rep.4 4101:::NRP.Day20..1 4101:::NRP.Day8..2 4101:::NRP.Day8..3 4107:::DIPED..100ug.mL..DMSO..12h..2 4107:::EMB..10ug.mL..DMSO..12h 4107:::pH4.8vspH6.8..2h.B 4107:::pH5.2vspH6.8..10.5h. 4107:::pH5.2vspH6.8..11h. 4107:::pH5.2vspH6.8..5h. 4107:::Succinate.7H9.based.medium..1 4107:::Succinate.7H9.based.medium..2 4107:::X.241..0.1ug.mL..DMSO..12h..1..GEO.acc.GSM28046. 4107:::X.241..1ug.mL..DMSO..12h..1 4107:::X0.12mg.mL.BZAvspH5.6..11h. 4107:::X0.12mg.mL.BZAvspH5.6..5h. 4107:::X0.12mg.mL.PZA.pH5.6..2.5h. 4107:::X0.12mg.mL.PZA.pH5.6..4h..2 4107:::X0.12mg.mL.PZAvspH5.6..4h. 4107:::X0.1mM.GSNO.DMSO..6h 4107:::X0.1mM.GSNOvsDMSO..4h 4107:::X0.1ug.mL.Mtmvsctrl..0.75h. 4107:::X0.2mg.mL.AmpvsEtOH..6h 4107:::X0.2mg.mL.AmpvsEtOH..6hA 4107:::X0.2mg.mL.AmpvsEtOH..6hB 4107:::X0.2ug.mL.Mtmvsctrl..0.33h. 4107:::X0.2ug.mL.Mtmvsctrl..2h. 4107:::X0.2ug.mL.Mtmvsctrl..4h.A 4107:::X0.2ug.mL.PA824.DMSO..6h..1 4107:::X0.2ug.mL.RifvsDMSO..6h 4107:::X0.2ug.mL.RifvsDMSO..6hA 4107:::X0.4ug.mL.INHvsEtOH..6hA 4107:::X0.4ug.mL.PA824.DMSO..6h..1 4107:::X0.4ug.mL.PA824.DMSO..6h..2 4107:::X0.5ug.mL..111891vsDMSO.6h 4107:::X0.5ug.mL..111891vsDMSO.6hA 4107:::X0.5ug.mL..111895vsDMSO.6h 4107:::X0.5ug.mL..121940vsDMSO.6hA 4107:::X0.5ug.mL.CeruleninvsDMSO..6hC 4107:::X0.5ug.mL.CervsEtOH..6h 4107:::X1.2mg.mL.PZAvspH5.6..6h.A 4107:::X1.ug.mL..111891vsDMSO..6h 4107:::X100ug.mL.TriclosanvsEtOH..6hA 4107:::X100ug.mLCephalexinvsEtOH.6h 4107:::X100ug.mLCephalexinvsEtOH.6hA 4107:::X10ug.mL..109vsDMSO..6h 4107:::X10ug.mL.Amikacin.EtOH..6h 4107:::X10ug.mL.menadionevsDMSO..6h 4107:::X10ug.mL.methoxatinvsDMSO..6h.A 4107:::X10ug.mL.PA.1vsDMSO..6hB 4107:::X10ug.mL.TriclosanvsDMSO..6h 4107:::X10ug.mL.TriclosanvsDMSO..6hA 4107:::X130ug.mL.TLMvsDMSO..6h 4107:::X130ug.mL.TLMvsDMSO..6hA 4107:::X20ug.mL.Cephalexin.Ctrl..6h..2 4107:::X20ug.mL.CPZvsDMSO..6h.A 4107:::X20ug.mL.ethambutol.DMSO 4107:::X20ug.mL.methoxatinvsDMSO..6h 4107:::X20ug.mL.Prcp.6778.DMSO..6h..1 4107:::X20ug.mL.Prcp.6778.DMSO..6h..2 4107:::X20ug.mL.Procept.6776vsDMSO..6h 4107:::X20ug.mL.Procept6776vsDMSO..6h 4107:::X20ug.mLProcept6778vsDMSO.6hA 4107:::X25ug.mL.CPZvsDMSO..6h.B 4107:::X2ug.mL..111891vsDMSO..6h 4107:::X30ug.mLProcept6776vsDMSO.6hA 4107:::X40ug.mL.5CL.pH5.6..4h..1 4107:::X40ug.mL.5CL.pH5.6..4h..3 4107:::X40ug.mL.EtavsEtOH..6h 4107:::X4mM.H2O2.ctrl..4h...2 4107:::X4mM.H2O2vsctrl..1h. 4107:::X4mM.H2O2vsctrl..2h.A 4107:::X4mM.H2O2vsctrl..4h.A 4107:::X50ug.mL.PA.1vsDMSO..6h 4107:::X50ug.mL.PA.21vsDMSO..6h 4107:::X50ug.mL.Thioridazine.DMSO..6h 4107:::X50ug.mL.TriclosanvsEtOH..6hA 4107:::X50ug.mLAntimycinAvsDMSO..6hB 4107:::X5ug.mL.CapvsEtOH..6hA 4107:::X5ug.mL.TetvsEtOH..6h 4107:::X9ug.mLAscidideminNpvsDMSO.6h 4363:::H37Rv.hypoxia.7.day.rep.6 4523:::H37Rv.wild.type.control.vs.0.05..SDS.for.60.min.rep.4 4575:::Purified.Surfactant.Lipids.2hrs.rep.1 4575:::Whole.Lung.Surfactant.30min.rep.2 4583:::X0.2mg.ml.TLM.vs.Ethanol.6hrs.rep.1 4583:::X0.2mg.ml.TLM.vs.Ethanol.6hrs.rep.2 4583:::X130ug.ml.TLM.vs.DMSO.6hrs.rep.1 4599:::H37Rv.grown.in.7H9.vs.H37Rv.24hrs.after.infection.in.macrophages.rep.2 4599:::H37Rv.grown.in.7H9.vs.H37Rv.4hrs.after.infection.in.macrophages.rep.5 4599:::H37Rv.vs.SigE.mutant.24hrs.after.macrophage.infection.rep.3 4599:::SigE.mutant.grown.in.7H9.vs.24hrs.after.infection.in.macrophages..DS..rep.2 4615:::AA_30uM_10min_03 4615:::AA_30uM_2h_09 4615:::aceatate.induction.2 4615:::Acetate.3mM.60m.04 4615:::CK.PA.Na.2h.01 4615:::Glucose_20mM_1h.OA_50uM_10min 4615:::L2A_30uM_10min_04 4615:::L2A_30uM_10min_06 4615:::L2A_30uM_1h_04 4615:::L2A_30uM_2h_05 4615:::L2A_30uM_4h_04 4615:::MDG_1254.pMV261.3524_01 4615:::MDG_1254.pMV261.3524_03 4615:::MDG.MD.glycerol 4615:::MTB1254_Pellicle_10D_04 4615:::MTB1254_Pellicle_14D_01 4615:::MTB1254_Pellicle_14D_03 4615:::MTB1254_SDS_90MIN_01 4615:::MTB1254.B4.1.Compl._OA_30MIN_01 4615:::MTB1254.B4.1.Compl._OA_30MIN_04 4615:::MTB1254.B4.1.Compl._PA_4h_06 4615:::MTB1254.Rv3524.2._PA50.OA30_30m_01 4615:::MTB1254.Rv3524.2.compl._PA50.OA30_30m_02 4615:::OA_50uM_10min_03 4615:::OA_50uM_1h_06 4615:::OA_50uM_2h_02 4615:::OA_50uM_2h_05 4615:::OA_50uM_2h..0.5.BSA.10mMGlu._30min_01 4615:::OA_50uM_2h..1.0..BSA.10mMGlu._30.min._01 4615:::OA_50uM_2h..1.5.BSA.10mMGlu._30.min_01 4615:::OA_50uM_2h.1.0..BSA_30min_01 4615:::OA_50uM_2h.1.5..BSA_30min_01 4615:::OA_50uM_4h_04 4615:::OA_50uM_4h_06 4615:::OA_50uM_4h_07 4615:::OA_50uM_4h_08 4615:::OA_50uM_4h_09 4615:::PA_25uM_2h_T0_01 4615:::PA_50uM_10min_T0_01 4615:::PA_50uM_12h_03 4615:::PA_50uM_1h_02 4615:::PA_50uM_2h_02 4615:::PA_50uM_2h_05 4615:::PA_50uM_30.min_05 4615:::PA_50uM_30min_09 4615:::PA_50uM_4h_03 4615:::PA_50uM_4h_05 4615:::PA_50uM_8h_03 4615:::PA_50uM.0.5.BSA_1h_01 4615:::PA_50uM.AA_30uM_2h_02 4615:::PA_50uM.MAPP_30m_01 4615:::PA_50uM.OA_10uM_24h_02 4615:::PA_50uM.OA_10uM_2h_03 4615:::PA_50uM.OA_30uM_2h_04 4615:::PA_50uM.OA_30uM_30min_02 4615:::PA_50uM.OA_30uM_30min_04 4615:::Rv.MT71_100503_02 4615:::Rv.MT90_100603_01 4615:::Rv.p0485.1._300uM.PA_10m 4615:::Rv.pMV0481.2. 4615:::Rv3524.1_OA_10min 4615:::Starvation_1254_3d_02 4615:::Starvation_1254_PA50.OA30_24h_01 4615:::Starvation_1254_PA50.OA30_24h_02 4615:::Starvation_OA50_24h_03 4615:::TBD041 4615:::TBD1114 4615:::TBD1277 4615:::TBE060 4615:::TBE733 4615:::TBE734 4615:::Test_361.2 4615:::Test.4 4615:::Test.5 4615:::Test.6 4615:::WM_1254_10d_01 4615:::WM_1254.whiB4._10d_01 4615:::WT_85.1_OA_10min_01 4615:::X2.BA_100uM_30min_01 4630:::H37Rv.wild.type.Cy5.vs.Rv0485.Tn.mutant.Cy3..DS..rep.2 4638:::CDC1551.wild.type.vs.kstR.null.in.1mg.ml.cholesterol.for.24.hrs.rep.1 4638:::CDC1551.wild.type.vs.kstR.null.in.1mg.ml.cholesterol.for.24.hrs.rep.2 4696:::H37Rv.wt.vs.dosT.null.anaerobic.Gaspak.4hr.rep.2 4696:::H37Rv.wt.vs.dosT.null.nitric.oxide.treatment.1hr.rep.1 4699:::CDC1551.Ctrl.vs.clinical.isolate.1797.03_EAI.rep.2 4699:::CDC1551.Ctrl.vs.clinical.isolate.1934.03_Beijing.rep.2 4699:::CDC1551.Ctrl.vs.clinical.isolate.947.01_EAI.rep.1 4699:::CDC1551.Ctrl.vs.clinical.isolate.9532.03_Haarlem.rep.1 4703:::Clinical.isolate.10517.01_Afri2.extra.vs.intracellular.in.resting.macrophages.rep.2 4703:::Clinical.isolate.12954.03_Beijing.extra.vs.intracellular.in.resting.macrophages.rep.1 4703:::Clinical.isolate.1500.03_Beijing.extra.vs.intracellular.in.resting.macrophages.rep.2 4703:::Clinical.isolate.4850.03_EAI.extra.vs.intracellular.in.resting.macrophages.rep.1 4703:::Clinical.isolate.4850.03_EAI.extra.vs.intracellular.in.resting.macrophages.rep.2 4703:::Clinical.isolate.5468.02_Afri2.extra.vs.intracellular.in.resting.macrophages.rep.1 4703:::Clinical.isolate.947.01_EAI.extra.vs.intracellular.in.resting.macrophages.rep.1 4703:::H37Rv.extra.vs.intracellular.in.resting.macrophages.rep.1 4704:::CDC1551.extra.vs.intracellular.in.activated.macrophages.rep.1 4704:::Clinical.isolate.10517.01_Afri2.extra.vs.intracellular.in.activated.macrophages.rep.1 4704:::Clinical.isolate.4850.03_EAI.extra.vs.intracellular.in.activated.macrophages.rep.1 4735:::H37Rv.dosR.KO.vs.BCG.with.pMFdosR.at.OD.0.4.rep.1 4795:::CDC1551.ctrl.vs.ctrl.at.0.hr.rep.1 4799:::H37Rv.ctrl.vs.1ug.ml.Isoniazid.for.6hrs.rep.3 4799:::H37Rv.KatG.null..ctrl.vs.1ug.ml.Isoniazid.for.2hrs.rep.3 4799:::H37Rv.mouse.hallow.fiber..ctrl.vs.25mg.kg.Isoniazid.3rd.dose.6hrs.rep.2 4802:::H37Rv.ctrl.vs.relE1.overexpression.6.hr.rep.2 4802:::H37Rv.ctrl.vs.relE2.overexpression.24.hr.rep.3 4802:::H37Rv.ctrl.vs.relE3.overexpression.72.hr.rep.5 4815:::H37Rv.reaeration.for.4hrs.rep.4 Milano_Tuberculosis2009:::H37Rv.wild.type.vs.H37Rv.Bif1.mutant.rep.2 Milano_Tuberculosis2009:::H37Rv.wild.type.vs.H37Rv.Bif1.mutant.rep.3 Raghavan_Nature2008:::Complemented.espR.mutant..R...rep3 Raghavan_Nature2008:::ESPR..mutant..R...rep3 Raghavan_Nature2008:::espR.mutant.complemented.with.N.terminal.Flag.espR..RFL..rep2 Schnappinger_JEM2003:::MTB.in.NOS2.null.macrophages.for.24hrs Schnappinger_JEM2003:::MTB.in.Wild.type.macrophages.for.48hrs Schnappinger_JEM2003:::MTB.in.Wild.type.macrophages.for.4hrs RV0401 NA -0.122634683541199 -0.858442784788394 0.0613173417705994 NA 1.10371215187079 0.26497851265152 1.51760420882234 -3.78196604420805 1.27403810123357 0.936792721495271 -0.0374717088598108 0.374717088598108 -0.674490759476595 NA NA -0.607041683528936 -0.640766221502765 0.607041683528936 0.640766221502765 0.35 -1.05 NA 0.109800821310143 -0.768605749171004 -0.862720738865412 -0.611747433013656 0.3607741271619 0.0470574948472043 1.33329568733746 0.0470574948472043 -0.0784291580786738 -0.0156858316157348 0.0784291580786738 NA -0.382211430370071 0.382211430370071 -0.412188797457919 -0.0374717088598109 -0.637019050616784 NA -1.34898151895319 0.149886835439243 1.98600056956997 2.58554791132695 -0.337245379738298 0.187358544299054 0.412188797457919 -1.83611373413073 0.0749434177196217 -0.861849303775649 -1.16162297465414 -1.68622689869149 -1.0492078480747 -1.42392493667281 -0.187358544299054 -0.374717088598108 -0.599547341756973 -1.0492078480747 1.68622689869149 1.12415126579433 -2.54807620246714 2.09841569614941 1.34898151895319 0.674490759476595 -0.0374717088598109 0.487132215177541 -0.337245379738298 -0.412188797457919 -0.0749434177196217 -0.562075632897163 -0.599547341756973 0.262301962018676 0.149886835439243 -2.32324594930827 -0.861849303775649 -0.974264430355082 -1.19909468351395 1.49886835439243 0.112415126579433 -0.337245379738298 -0.337245379738298 1.83611373413073 1.27403810123357 0.861849303775649 1.0492078480747 0.89932101263546 0.786905886056028 0.44966050631773 0.44966050631773 -0.599547341756973 0.599547341756974 1.08667955693451 0.562075632897163 1.16162297465414 1.98600056956997 -0.599547341756973 0.0374717088598109 0.0374717088598109 -1.94852886071016 0.824377594915839 0.262301962018676 1.64875518983168 2.99773670878487 2.13588740500922 1.01173613921489 0.487132215177541 2.28577424044846 0.149886835439243 -0.262301962018676 0 -0.637019050616784 0.0749434177196217 1.23656639237376 -0.418649436916507 0.257893525682228 -1.09108799327096 -0.833194467588735 -0.3 0.05 1.35 0.327025822776531 0 0.654051645553062 -0.265708481005931 -1.83076063286504 -0.240889556955927 NA 0.0963558227823707 0.385423291129483 0.578134936694224 0.770846582258966 1.58987107590912 1.10809196199726 -1.10809196199726 0.963558227823707 -1.54169316451793 -1.15626987338845 2.36071765816808 -0.578134936694224 -0.240889556955927 -0.722668670867781 -3.37245379738298 -0.433601202520668 -0.674490759476595 1.92711645564741 -0.0481779113911854 -0.337245379738298 -2.21618392399453 0.674490759476595 -1.54169316451793 0.963558227823707 0.867202405041337 0.770846582258966 0.578134936694224 -0.144533734173556 0.0481779113911854 0.0481779113911854 1.05991405060608 -0.62631284808541 0.192711645564741 0.289067468347112 -0.385423291129483 0.62631284808541 -0.192711645564741 0.481779113911854 0.481779113911854 2.07165018982097 0.144533734173556 NA 0.819024493650151 1.10809196199726 1.10809196199726 0.674490759476595 0.915380316432522 -0.481779113911854 -1.54169316451793 -1.25262569617082 0.0963558227823707 0.289067468347112 1.15626987338845 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