Rv0324 Transcriptional regulator, ArsR family

Rv0324 (Transcriptional regulator, ArsR family) is predicted to be co-regulated in modules bicluster_0498 with residual 0.51 and bicluster_0546 with residual 0.58.

This regulation is possibly mediated by two de-novo identified cis-regulatory motifs in each module with e-values , 0.00 and 6.30 for bicluster_0498 and 0.00 and 0.21 for bicluster_0546 respectively.

These modules are enriched for following go terms: .

This gene is found to be for growth on cholesterol.

Mutant available?:

Displaying 71 - 80 of 161
Gene Target Differential Expression Distance Expression pvalue Type
No -59 -0.18 0.0383952 CDS
Repressed -41 -2.22 8.05e-16 CDS
PPE family protein
No -125 -0.2 0.202429 CDS
PPE family protein
No -51 -0.26 0.0836051 CDS
Drugs-transport transmembrane ATP-binding protein ABC transporter
No -42 -0.43 0.12855 CDS
Repressed -50 -1.13 7.21e-40 Primary.TSS
O-methyltransferase
Induced 62 0.78 0.0000332 CDS
Phosphatidylethanolamine-binding protein
Induced 13 1.24 0.000000000000069 Primary.TSS
Transcriptional regulator, AraC family
No 9 0.58 0.000629727 Primary.TSS
Monooxygenase component A
Induced -53 0.99 0.000000513 Primary.TSS
not assigned to any KEGG Pathway.
No TFOE experiment results were found

TRIP log2 fold abundance change

NA
Displaying 1 - 17 of 17
Condition Count Day Doublings Fitness U.I Plots
D0U 27 0 0.00 9.75 U
D14I 4 14 15.63 3.03 I
D14U 4 14 15.63 6.75 U
D17I 3 17 19.15 I
D17U 3 17 19.15 5.68 U
D21I 4 21 23.23 1.11 I
D21U 4 21 23.23 5.41 U
D24I 3 24 26.60 I
D24U 3 24 26.60 5.48 U
D28I 4 28 30.61 1.11 I
D28U 4 28 30.61 4.81 U
D3I 3 3 3.83 9.21 I
D3U 3 3 3.83 9.54 U
D5I 9 5 6.00 9.00 I
D5U 17 5 6.00 11.09 U
D7I 18 7 8.14 6.42 I
D7U 19 7 8.14 8.94 U