Rv0691c Mycofactocin system transcriptional regulator

Rv0691c (Mycofactocin system transcriptional regulator) is predicted to be co-regulated in modules bicluster_0386 with residual 0.48 and bicluster_0486 with residual 0.55.

This regulation is possibly mediated by two de-novo identified cis-regulatory motifs in each module with e-values , 0.11 and 1,000.00 for bicluster_0386 and 500.00 and 840.00 for bicluster_0486 respectively.

These modules are enriched for following go terms: DNA binding, nucleic acid binding.

This gene is found to be for growth on cholesterol.

Mutant available?:

Displaying 41 - 50 of 113
Gene Target Differential Expression Distance Expression pvalue Type
Twin-arginine translocation protein TatB
No 65 0.2 0.999588 Internal.TSS
No 40 0.59 0.670996 CDS
No -71 0.59 0.670996 Internal.TSS
Transcriptional regulatory protein EmbR
No -54 -0.18 0.999588 CDS
Adenylate cyclase (EC 4.6.1.1)
No -115 0.36 0.999588 Primary.TSS
DinG family ATP-dependent helicase YoaA
No 55 0.12 0.999588 CDS
Ribulose-phosphate 3-epimerase (EC 5.1.3.1)
No 32 0.31 0.999588 Antisense.TSS
\Probable conserved Proline, Glycine, Valine-rich secreted protein\\\""
No 58 -0.03 0.999588 Primary.TSS
Heme O synthase, protoheme IX farnesyltransferase (EC 2.5.1.-) COX10-CtaB
No -80 0.22 0.999588 Primary.TSS
Cytochrome oxidase assembly protein
No 44 -0.02 0.999588 Internal.TSS
not assigned to any KEGG Pathway.
No TFOE experiment results were found

TRIP log2 fold abundance change

NA
Displaying 1 - 17 of 17
Condition Count Day Doublings Fitness U.I Plots
D0U 27 0 0.00 15.13 U
D3I 3 3 3.83 15.03 I
D3U 3 3 3.83 15.34 U
D5I 9 5 6.00 14.07 I
D5U 17 5 6.00 14.28 U
D7I 18 7 8.14 14.39 I
D7U 19 7 8.14 14.80 U
D14I 4 14 15.63 13.68 I
D14U 4 14 15.63 14.08 U
D17I 3 17 19.15 12.34 I
D17U 3 17 19.15 13.49 U
D21U 4 21 23.23 13.41 U
D21I 4 21 23.23 11.83 I
D24I 3 24 26.60 10.46 I
D24U 3 24 26.60 12.62 U
D28I 4 28 30.61 10.15 I
D28U 4 28 30.61 12.38 U