Rv2011c Transcriptional regulator, MarR family

Rv2011c (Transcriptional regulator, MarR family) is predicted to be co-regulated in modules bicluster_0291 with residual 0.49 and bicluster_0346 with residual 0.51.

This regulation is possibly mediated by two de-novo identified cis-regulatory motifs in each module with e-values , 0.00 and 3.30 for bicluster_0291 and 0.00 and 0.14 for bicluster_0346 respectively.

These modules are enriched for following go terms: acyl-CoA dehydrogenase activity .

This gene is found to be for growth on cholesterol.

Mutant available?:

Displaying 61 - 70 of 79
Gene Target Differential Expression Distance Expression pvalue Type
PPE family protein
No -72 0.06 0.934178 Internal.TSS
PPE family protein
No 36 0.06 0.934178 Antisense.TSS
Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] (EC 2.6.1.16)
Repressed 69 -1.71 1.23e-17 CDS
POSSIBLE CONSERVED TRANSMEMBRANE PROTEIN
Repressed 38 -2.18 1.86e-18 Internal.TSS
POSSIBLE CONSERVED TRANSMEMBRANE PROTEIN
Repressed 47 -2.18 1.86e-18 CDS
dicarboxylic acid transporter PcaT
No 45 -0.34 0.481306 Primary.TSS
PPE family protein
No -18 0.08 0.753354 Primary.TSS
4-hydroxy-2-oxovalerate aldolase (EC 4.1.3.-)
No 69 0.29 0.464854 CDS
Repressed 11 -0.71 0.041707 Internal.TSS
Arylamine N-acetyltransferase (EC 2.3.1.5)
Repressed 11 -1.33 0.000000573 Primary.TSS
not assigned to any KEGG Pathway.
No TFOE experiment results were found
TRIP log2 fold abundance change
NA
Displaying 1 - 17 of 17
Condition Count Day Doublings Fitness U.I Plots
D21I 4 21 23.23 9.25 I
D24I 3 24 26.60 6.46 I
D28I 4 28 30.61 6.92 I
D3I 3 3 3.83 14.66 I
D5I 9 5 6.00 13.66 I
D7I 18 7 8.14 14.54 I
D14I 4 14 15.63 12.53 I
D17I 3 17 19.15 9.92 I
D17U 3 17 19.15 12.91 U
D21U 4 21 23.23 13.12 U
D24U 3 24 26.60 12.29 U
D28U 4 28 30.61 12.27 U
D0U 27 0 0.00 14.56 U
D3U 3 3 3.83 14.70 U
D5U 17 5 6.00 13.47 U
D7U 19 7 8.14 14.34 U
D14U 4 14 15.63 13.70 U