Rv2324 Transcriptional regulator, AsnC family

Rv2324 (Transcriptional regulator, AsnC family) is predicted to be co-regulated in modules bicluster_0346 with residual 0.51 and bicluster_0420 with residual 0.47.

This regulation is possibly mediated by two de-novo identified cis-regulatory motifs in each module with e-values , 0.00 and 0.14 for bicluster_0346 and 0.00 and 0.00 for bicluster_0420 respectively.

These modules are enriched for following go terms: .

This gene is found to be for growth on cholesterol.

Mutant available?:

Displaying 51 - 60 of 128
Gene Target Differential Expression Distance Expression pvalue Type
PE family protein
Repressed -36 -0.78 0.00000363 Primary.TSS
Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2)
Repressed -16 -1.19 0.00000000000342 Primary.TSS
Possible membrane protein
No -61 -0.28 0.829372 CDS
Cobalt-precorrin-6y C5-methyltransferase (EC 2.1.1.-) / Cobalt-precorrin-6y C15-methyltransferase [decarboxylating] (EC 2.1.1.-)
No -38 -0.06 0.973801 Antisense.TSS
No -51 0.13 0.922427 Internal.TSS
Lipoprotein LppJ
No -51 -0.39 0.553034 Primary.TSS
FIG021764: Possible membrane protein
No -14 -0.06 0.949904 Primary.TSS
PE family protein
Repressed 66 -0.68 0.000775933 Primary.TSS
Ubiquinol--cytochrome c reductase, cytochrome B subunit (EC 1.10.2.2)
No -76 0.15 0.880555 Antisense.TSS
Adenosine kinase (EC 2.7.1.20)
No -67 -0.05 0.939853 Primary.TSS
not assigned to any KEGG Pathway.
No TFOE experiment results were found

TRIP log2 fold abundance change

NA
Displaying 1 - 17 of 17
Condition Count Day Doublings Fitness U.I Plots
D24I 3 24 26.60 I
D17I 3 17 19.15 3.15 I
D28I 4 28 30.61 4.59 I
D14I 4 14 15.63 5.04 I
D21I 4 21 23.23 7.99 I
D7I 18 7 8.14 11.63 I
D17U 3 17 19.15 11.85 U
D24U 3 24 26.60 12.06 U
D14U 4 14 15.63 12.17 U
D21U 4 21 23.23 12.32 U
D28U 4 28 30.61 12.59 U
D0U 27 0 0.00 12.79 U
D3I 3 3 3.83 12.85 I
D7U 19 7 8.14 12.96 U
D3U 3 3 3.83 13.00 U
D5I 9 5 6.00 13.44 I
D5U 17 5 6.00 14.02 U