Regulatory Modules
Displaying 51 - 60 of 170Desulfovibrio vulgaris Hildenborough
Title | Motif 1 | Motif 2 | Residual | Bicluster Genes | Selected GO Terms |
---|---|---|---|---|---|
bicluster_0241 | 1.1 | 27 | 0.40 | DVU0170, DVU0174, DVU0729, DVU0820, DVU0821, DVU0822, DVU1263, DVU1774, DVU1811, DVU1813, DVU1814, DVU2304, DVU2345, DVU2585, DVU2615, DVU2676, DVU2833, DVU3155, DVUA0025 | aspartic-type endopeptidase activity, aspartic-type peptidase activity, endopeptidase activity, peptidase activity, acting on L-amino ac..., peptidase activity |
bicluster_0063 | 1.2 | 390 | 0.47 | DVU0056, DVU0227, DVU0334, DVU0395, DVU0454, DVU0575, DVU0619, DVU0620, DVU0656, DVU0854, DVU1090, DVU1408, DVU1537, DVU1579, DVU1616, DVU1820, DVU1877, DVU1888, DVU2471, DVU2612, DVU2644, DVU3345, DVU0034, DVU1434, DVU2639, DVU3281, DVU3359 | deaminase activity, ATP binding, adenyl ribonucleotide binding, adenyl nucleotide binding |
bicluster_0018 | 1.5 | 16000 | 0.44 | DVU0004, DVU0563, DVU0835, DVU0837, DVU0838, DVU0839, DVU0927, DVU0928, DVU1033, DVU1074, DVU1257, DVU1302, DVU1334, DVU1676, DVU1792, DVU1931, DVU2215, DVU2222, DVU2538, DVU2920 | nucleic acid metabolic process, cellular macromolecule metabolic process, DNA metabolic process, macromolecule metabolic process, nucleobase-containing compound metabolic... |
bicluster_0135 | 1.9 | 5000 | 0.47 | DVU0299, DVU0300, DVU0570, DVU0677, DVU1440, DVU1532, DVU1548, DVU1606, DVU2251, DVU2747, DVU2933, DVU3016, DVU0079, DVU0328, DVU0691, DVU1004, DVU2373, DVU2609, DVU2779, DVU3127, DVU3392 | cell envelope organization, Gram-negative-bacterium-type cell outer ..., membrane biogenesis, single-organism membrane organization, membrane organization |
bicluster_0184 | 2.2 | 4100 | 0.49 | DVU0044, DVU0047, DVU0521, DVU0522, DVU0046, DVU0310, DVU0311, DVU0312, DVU0313, DVU0314, DVU0315, DVU0409, DVU0512, DVU0513, DVU0515, DVU0516, DVU0517, DVU0519, DVU0520, DVU0858, DVU0862, DVU0863, DVU0913, DVU2211, DVU2232, DVU3001, DVU3003, DVU3018, DVU3019, DVU3020 | organelle organization, cell projection assembly, bacterial-type flagellum assembly, organelle assembly, cell projection organization |
bicluster_0066 | 2.4 | 3000 | 0.43 | DVU0416, DVU1192, DVU1987, DVU2089, DVU2100, DVU2108, DVU2362, DVU2363, DVU2440, DVU2487, DVU2488, DVU3315, DVU3381, DVU3382 | magnesium ion binding, hydrolase activity, acting on acid anhyd..., hydrolase activity, acting on acid anhyd..., 2 iron, 2 sulfur cluster binding, ion binding |
bicluster_0290 | 2.7 | 40 | 0.33 | DVU0475, DVU1510, DVU2006, DVU2105, DVU2686, DVU2836, DVU2837, DVU2838, DVU2839 | DNA binding, sequence-specific DNA binding, nucleic acid binding |
bicluster_0100 | 3 | 530 | 0.43 | DVU1476, DVU1517, DVU1518, DVU1738, DVU1972, DVU2008, DVU2074, DVU2134, DVU2189, DVU2190, DVU2632, DVU2685, DVU0543, DVU1161, DVU1482, DVU1779, DVU1872, DVU1998, DVU2213, DVU3314 | chemotaxis, taxis, sequence-specific DNA binding, DNA binding, nucleic acid binding |
bicluster_0004 | 3.1 | 2600 | 0.45 | DVU0483, DVU0595, DVU0662, DVU0663, DVU0664, DVU0725, DVU0812, DVU1013, DVU1212, DVU1629, DVU1839, DVU1874, DVU2324, DVU2439, DVU2467, DVU2468, DVU2469, DVU2974, DVU3283, DVU3316 | sulfur amino acid metabolic process, sulfur amino acid biosynthetic process, serine family amino acid metabolic proce..., cellular amino acid metabolic process, O-acyltransferase activity |
bicluster_0010 | 3.1 | 1500 | 0.48 | DVU0161, DVU0162, DVU0399, DVU0503, DVU0507, DVU0508, DVU0510, DVU0511, DVU0957, DVU1077, DVU1078, DVU1202, DVU1207, DVU1298, DVU1299, DVU1300, DVU1575, DVU1622, DVU2231, DVU2913, DVU2914, DVU2923, DVU3308, DVU3310, DVU3368 | nucleobase-containing compound biosynthe..., cellular nitrogen compound biosynthetic ..., aromatic compound biosynthetic process, ribonucleoside monophosphate biosyntheti..., nucleoside monophosphate biosynthetic pr... |