Regulatory Modules
Displaying 81 - 90 of 170Desulfovibrio vulgaris Hildenborough
| Title | Motif 1 | Motif 2 | Residual | Bicluster Genes | Selected GO Terms |
|---|---|---|---|---|---|
| bicluster_0014 |
150 |
1300 |
0.50 | DVU0072, DVU0076, DVU0080, DVU0328, DVU0425, DVU0428, DVU0439, DVU0441, DVU0478, DVU0638, DVU0680, DVU0691, DVU0743, DVU1004, DVU1051, DVU1064, DVU1423, DVU1425, DVU1452, DVU1607, DVU1926, DVU2568, DVU2583, DVU2627, DVU2673, DVU2779, DVU3113, DVU3127, DVU3296 | organonitrogen compound catabolic proces..., single-organism catabolic process, cellular catabolic process, catabolic process, organic substance catabolic process |
| bicluster_0090 |
0.2 |
1400 |
0.45 | DVU0223, DVU0526, DVU0727, DVU0728, DVU0756, DVU1151, DVU1492, DVU1628, DVU1630, DVU1710, DVU1730, DVU1855, DVU2309, DVU2423, DVU2845, DVU2846, DVUA0089, DVU1379, DVU1629, DVU1729, DVU2614 | |
| bicluster_0165 |
10000 |
1500 |
0.42 | DVU1511, DVU2155, DVU2173, DVU2540, DVU3306, DVU1518, DVU1565, DVU1752, DVU2185, DVU2189, DVU2253, DVU3044, DVU3260, DVU3285, DVU3329 | |
| bicluster_0036 |
28 |
1500 |
0.39 | DVU0081, DVU0083, DVU0316, DVU0484, DVU0494, DVU0514, DVU0636, DVU1433, DVU1940, DVU2663, DVU2865, DVU3034, DVU3106, DVU3387, DVU0486, DVU2622 | cofactor binding, ion binding, pyridoxal phosphate binding, FMN binding |
| bicluster_0010 |
3.1 |
1500 |
0.48 | DVU0161, DVU0162, DVU0399, DVU0503, DVU0507, DVU0508, DVU0510, DVU0511, DVU0957, DVU1077, DVU1078, DVU1202, DVU1207, DVU1298, DVU1299, DVU1300, DVU1575, DVU1622, DVU2231, DVU2913, DVU2914, DVU2923, DVU3308, DVU3310, DVU3368 | nucleobase-containing compound biosynthe..., cellular nitrogen compound biosynthetic ..., aromatic compound biosynthetic process, ribonucleoside monophosphate biosyntheti..., nucleoside monophosphate biosynthetic pr... |
| bicluster_0338 |
2400 |
1800 |
0.39 | DVU1053, DVU1488, DVU1494, DVU1495, DVU1496, DVU1497, DVU1498, DVU1499, DVU1500, DVU1501, DVU1514, DVU1522, DVU1523, DVU1524 | |
| bicluster_0259 |
5700 |
2000 |
0.39 | DVU2127, DVU0888, DVU1107, DVU2120, DVU2129, DVU2151, DVU2157, DVU2191, DVU2194, DVU3306 | phosphorelay sensor kinase activity, protein kinase activity, protein histidine kinase activity, receptor activity, phosphotransferase activity, nitrogenous... |
| bicluster_0129 |
1000 |
2100 |
0.40 | DVU1496, DVU1498, DVU1499, DVU1500, DVU1502, DVU1514, DVU1522, DVU1524, DVU1493, DVU1513, DVU1515, DVU1516, DVU1517, DVU1525 | DNA (cytosine-5-)-methyltransferase acti..., DNA-methyltransferase activity, S-adenosylmethionine-dependent methyltra..., methyltransferase activity, transferase activity, transferring one-c... |
| bicluster_0121 |
17 |
2200 |
0.50 | DVU0408, DVU1171, DVU1367, DVU1387, DVU1739, DVU1750, DVU1995, DVU2017, DVU2068, DVU2178, DVU2263, DVU2682, DVU2842, DVU3138, DVU3218, DVUA0018, DVUA0067, DVUA0135, DVU0196, DVU0563, DVU0802, DVU0993, DVU1773, DVU2671, DVU3038, DVUA0071 | DNA integration, nucleic acid metabolic process, TAT protein transport complex, DNA (cytosine-5-)-methyltransferase acti..., DNA-methyltransferase activity |
| bicluster_0045 |
93 |
2300 |
0.36 | DVU1303, DVU1325, DVU1326, DVU1327, DVU1328, DVU1329, DVU1330, DVU1574, DVU2518, DVU2924, DVU2926, DVU1575 | ribosome, ribonucleoprotein complex, intracellular organelle, intracellular non-membrane-bounded organ..., cytoplasmic part |
