Regulatory Modules
Displaying 121 - 130 of 170Desulfovibrio vulgaris Hildenborough
| Title | Motif 1 | Motif 2 | Residual | Bicluster Genes | Selected GO Terms |
|---|---|---|---|---|---|
| bicluster_0032 |
5.7 |
59 |
0.43 | DVU0401, DVU0613, DVU0888, DVU0890, DVU0894, DVU0901, DVU0904, DVU0970, DVU1063, DVU2149, DVU2157, DVU2868, DVUA0151, DVU0426, DVU0892, DVU0906, DVU2539 | aromatic amino acid family metabolic pro..., aromatic amino acid family biosynthetic ..., UMP biosynthetic process, pyrimidine ribonucleoside monophosphate ..., pyrimidine ribonucleoside monophosphate ... |
| bicluster_0159 |
70 |
44 |
0.34 | DVU1510, DVU1692, DVU2179, DVU2220, DVU2686, DVU2836, DVU2839, DVUA0017, DVU1509, DVU1519 | DNA binding, nucleic acid binding, sequence-specific DNA binding |
| bicluster_0053 |
0.29 |
44 |
0.49 | DVU0146, DVU0148, DVU0149, DVU0150, DVU0152, DVU0372, DVU0458, DVU0593, DVU0678, DVU0751, DVU0805, DVU0806, DVU0882, DVU1670, DVU2014, DVU2061, DVU2104, DVU2952, DVU3125, DVU3182, DVU3188, DVU3384, DVUA0036, DVUA0061, DVU0147, DVU0594, DVU2088 | integral component of membrane, intrinsic component of membrane, FMN binding |
| bicluster_0122 |
0.0053 |
42 |
0.49 | DVU0033, DVU0122, DVU0123, DVU0583, DVU0598, DVU0599, DVU0935, DVU0942, DVU1241, DVU1786, DVU1854, DVU1880, DVU2444, DVU2445, DVU2516, DVU0523, DVU0524, DVU0976, DVU0977, DVU1073, DVU1857, DVU1869, DVU2948, DVU2952, DVU3125, DVU3218 | response to extracellular stimulus, cellular response to extracellular stimu..., cellular response to external stimulus, cellular response to stress, cell communication |
| bicluster_0290 |
2.7 |
40 |
0.33 | DVU0475, DVU1510, DVU2006, DVU2105, DVU2686, DVU2836, DVU2837, DVU2838, DVU2839 | DNA binding, sequence-specific DNA binding, nucleic acid binding |
| bicluster_0234 |
0.48 |
31 |
0.41 | DVU0351, DVU1035, DVU1239, DVU1508, DVU1858, DVU2283, DVU2336, DVU2628, DVU2874, DVU3110, DVU3325, DVUA0043, DVUA0096, DVUA0139, DVUA0140, DVU0070, DVU2456, DVU2517, DVU2755, DVU3211, DVUA0055 | carbohydrate binding, serine-type peptidase activity, serine hydrolase activity |
| bicluster_0061 |
23 |
30 |
0.49 | DVU0429, DVU0431, DVU0433, DVU0434, DVU3286, DVUA0001, DVUA0002, DVUA0003, DVUA0021, DVUA0022, DVUA0024, DVUA0035, DVUA0047, DVUA0064, DVUA0083, DVUA0092, DVUA0146, DVUA0148, DVUA0149, DVUA0046 | nucleoside triphosphate metabolic proces..., ribonucleoside triphosphate metabolic pr..., cellular respiration, energy derivation by oxidation of organi..., electron transport chain |
| bicluster_0241 |
1.1 |
27 |
0.40 | DVU0170, DVU0174, DVU0729, DVU0820, DVU0821, DVU0822, DVU1263, DVU1774, DVU1811, DVU1813, DVU1814, DVU2304, DVU2345, DVU2585, DVU2615, DVU2676, DVU2833, DVU3155, DVUA0025 | aspartic-type endopeptidase activity, aspartic-type peptidase activity, endopeptidase activity, peptidase activity, acting on L-amino ac..., peptidase activity |
| bicluster_0043 |
4 |
24 |
0.39 | DVU1525, DVU1714, DVU1752, DVU2125, DVU2166, DVU2541, DVU2820, DVUA0143, DVU2163, DVU2164, DVU2542 | |
| bicluster_0323 |
14 |
19 |
0.49 | DVU1025, DVU0064, DVU0732, DVU1089, DVU1090, DVU1205, DVU1206, DVU1220, DVU1293, DVU1615, DVU1616, DVU1617, DVU1618, DVU1619, DVU1620, DVU1819, DVU2586, DVU2890, DVU3065 | intramolecular transferase activity, fatty acid synthase activity, protein transmembrane transporter activi..., P-P-bond-hydrolysis-driven protein trans..., macromolecule transmembrane transporter ... |
