Regulatory Modules
Displaying 41 - 50 of 170Desulfovibrio vulgaris Hildenborough
| Title | Motif 1 | Motif 2 | Residual | Bicluster Genes | Selected GO Terms |
|---|---|---|---|---|---|
| bicluster_0203 |
1100 |
4100 |
0.44 | DVU2062, DVU2218, DVU2424, DVU2517, DVU1385, DVU1431, DVU1836, DVU2295, DVU2906, DVU3132, DVU3142 | response to stimulus, cellular response to stimulus, DNA repair, cellular response to DNA damage stimulus, catalytic complex |
| bicluster_0080 |
1000 |
9500 |
0.35 | DVU1053, DVU1107, DVU1162, DVU1504, DVU1513, DVU1515, DVU1516, DVU1969, DVU2604, DVU2645, DVU1417, DVU2647, DVU2720, DVU3139 | DNA (cytosine-5-)-methyltransferase acti..., DNA-methyltransferase activity, deaminase activity, S-adenosylmethionine-dependent methyltra... |
| bicluster_0129 |
1000 |
2100 |
0.40 | DVU1496, DVU1498, DVU1499, DVU1500, DVU1502, DVU1514, DVU1522, DVU1524, DVU1493, DVU1513, DVU1515, DVU1516, DVU1517, DVU1525 | DNA (cytosine-5-)-methyltransferase acti..., DNA-methyltransferase activity, S-adenosylmethionine-dependent methyltra..., methyltransferase activity, transferase activity, transferring one-c... |
| bicluster_0088 |
980 |
2600 |
0.39 | DVU0106, DVU0321, DVU0945, DVU1027, DVU1406, DVU1652, DVU1778, DVU2372, DVU2607, DVU2608, DVU3085, DVU3088, DVU2650, DVU3149 | IMP biosynthetic process, 'de novo' IMP biosynthetic process, IMP metabolic process, purine nucleotide biosynthetic process, purine nucleoside monophosphate biosynth... |
| bicluster_0336 |
950 |
660 |
0.39 | DVU0968, DVU0506, DVU0787, DVU0788, DVU0967, DVU1532, DVU1671, DVU1673, DVU1776, DVU1935, DVU2036, DVU2374, DVU2375, DVU3069, DVU3164, DVU3165 | cell morphogenesis, anatomical structure morphogenesis, developmental process, cellular component morphogenesis, single-organism developmental process |
| bicluster_0327 |
920 |
6.6 |
0.42 | DVU0021, DVU0091, DVU0327, DVU0336, DVU0340, DVU0451, DVU1056, DVU1276, DVU1347, DVU1611, DVU1772, DVU2367, DVU2558, DVU2757, DVU2942, DVU3167, DVU3168, DVU3174, DVU3175, DVU3239 | AMP biosynthetic process, AMP metabolic process, purine nucleoside biosynthetic process, purine ribonucleoside biosynthetic proce..., purine nucleoside metabolic process |
| bicluster_0268 |
840 |
17000 |
0.47 | DVU0722, DVU1428, DVU2417, DVU2515, DVU3356, DVU0128, DVU0299, DVU0300, DVU0613, DVU1361, DVU1458, DVU1548, DVU1590, DVU2140, DVU2243, DVU2416, DVU2484, DVU2485, DVU2673, DVU2762, DVU3355 | carbohydrate metabolic process, transferase activity, transferring hexos... |
| bicluster_0180 |
810 |
26000 |
0.43 | DVU0338, DVU0350, DVU0353, DVU1424, DVU2210, DVU2575, DVU2757, DVU2892, DVU2942, DVU2951, DVU3167, DVU0142, DVU0495, DVU0653, DVU1039, DVU1040, DVU1185, DVU1927, DVU3006, DVU3198 | lipopolysaccharide metabolic process, lipopolysaccharide biosynthetic process, polysaccharide biosynthetic process, polysaccharide metabolic process, cellular polysaccharide biosynthetic pro... |
| bicluster_0276 |
690 |
2600 |
0.37 | DVU0215, DVUA0007, DVUA0010, DVUA0013, DVU1164, DVU2710, DVU2711, DVU2713, DVU2715, DVUA0009 | nitrogen cycle metabolic process, hydrolase activity, acting on carbon-nit..., enzyme regulator activity, hydrolase activity, acting on carbon-nit... |
| bicluster_0152 |
640 |
3800 |
0.43 | DVU1486, DVU1494, DVU1495, DVU1497, DVU1501, DVU1503, DVU1523, DVU1487, DVU1489, DVU1502, DVU1504, DVU1505, DVU1506, DVU1972 | hydrolase activity, endonuclease activity, nuclease activity, peptidase activity, hydrolase activity, acting on ester bond... |
