Regulatory Modules
Displaying 71 - 80 of 162Methanococcus maripaludis S2
| Title | Motif 1 | Motif 2 | Residual | Bicluster Genes | Selected GO Terms |
|---|---|---|---|---|---|
| mmp-bicluster_0086 |
0.23 |
700 |
0.27 | MMP0100, MMP0340, MMP0341, MMP0910, MMP0919, MMP1222, MMP0160, MMP0285, MMP0287, MMP0590, MMP0713, MMP0714, MMP0715, MMP0814, MMP0815, MMP1128, MMP1196 | xenobiotic metabolic process, response to xenobiotic stimulus, phenylacetate catabolic process, xenobiotic catabolic process, benzene-containing compound metabolic pr... |
| mmp-bicluster_0089 |
0.000000023 |
700 |
0.42 | MMP1210, MMP1211, MMP1212, MMP1243, MMP1652, MMP0407, MMP0571, MMP0866, MMP0867, MMP1095, MMP1096, MMP1097, MMP1098, MMP1099, MMP1213, MMP1244, MMP1245, MMP1246, MMP1247, MMP1248, MMP1249, MMP1441, MMP1555, MMP1556, MMP1557, MMP1558, MMP1559, MMP1609 | cellular ion homeostasis, chemical homeostasis, ion homeostasis, cellular chemical homeostasis, inorganic ion homeostasis |
| mmp-bicluster_0122 |
7.5 |
710 |
0.23 | MMP0131, MMP0185, MMP0222, MMP0329, MMP0330, MMP1086, MMP1132, MMP1133, MMP1491, MMP1521, MMP0291, MMP0910, MMP0938, MMP1659 | pyrimidine-containing compound metabolic..., pyrimidine-containing compound biosynthe..., vitamin metabolic process, water-soluble vitamin metabolic process, vitamin biosynthetic process |
| mmp-bicluster_0037 |
0.071 |
730 |
0.21 | MMP0129, MMP0672, MMP0821, MMP1478, MMP1528 | aromatic amino acid family metabolic pro..., aromatic amino acid family biosynthetic ..., oxidoreductase activity, acting on CH-OH..., oxidoreductase activity, acting on the C... |
| mmp-bicluster_0048 |
0.0095 |
780 |
0.31 | MMP0533, MMP0192, MMP0275, MMP0466, MMP0467, MMP0468, MMP0469, MMP0470, MMP0471, MMP0472, MMP0502, MMP0680, MMP0851, MMP1193, MMP1194, MMP1481, MMP1482, MMP1483, MMP1602 | regulation of transcription, DNA-templat..., regulation of nucleobase-containing comp..., regulation of nitrogen compound metaboli..., regulation of RNA metabolic process, regulation of nucleic acid-templated tra... |
| mmp-bicluster_0078 |
1.3 |
950 |
0.39 | MMP0381, MMP0704, MMP0290, MMP0308, MMP0309, MMP0355, MMP0359, MMP0377, MMP0382, MMP0385, MMP0391, MMP0396, MMP0397, MMP0399, MMP0400, MMP0410, MMP0500, MMP1023, MMP1116, MMP1129, MMP1137, MMP1138, MMP1139, MMP1352, MMP1589 | pyrimidine nucleoside metabolic process, pyrimidine nucleotide metabolic process, pyrimidine nucleotide biosynthetic proce..., pyrimidine ribonucleotide metabolic proc..., pyrimidine ribonucleotide biosynthetic p... |
| mmp-bicluster_0151 |
0.017 |
970 |
0.49 | MMP0009, MMP0063, MMP0369, MMP0598, MMP0614, MMP0886, MMP0939, MMP1056, MMP1262, MMP1343, MMP1388, MMP1525, MMP1679, MMP0090, MMP0585, MMP1179, MMP1526, RNA_47, MMP0725, MMP0769, MMP0515, RNA_23, MMP0475 | ATP-binding cassette (ABC) transporter c..., plasma membrane part, ATPase dependent transmembrane transport..., catalytic complex, transmembrane transporter complex |
| mmp-bicluster_0025 |
5.9 |
990 |
0.31 | MMP0026, MMP0133, MMP0243, MMP0284, MMP0315, MMP0316, MMP0412, MMP0588, MMP0610, MMP0878, MMP0921, MMP0953, MMP1011, MMP1014, MMP1195, MMP1356, MMP1425, MMP1048, MMP0137, MMP1361 | nucleic acid phosphodiester bond hydroly..., RNA phosphodiester bond hydrolysis, cellular nitrogen compound metabolic pro..., RNA metabolic process |
| mmp-bicluster_0145 |
0.1 |
1000 |
0.24 | MMP0231, MMP0676, MMP1233, MMP1580, MMP0117, MMP0431, MMP0432, MMP0433, MMP0548, MMP0549, MMP0642, MMP0677, MMP0755, MMP1145, MMP1250, MMP1251, MMP1252, MMP1548 | formate dehydrogenase (NAD+) activity, endodeoxyribonuclease activity, producin..., endodeoxyribonuclease activity, deoxyribonuclease activity, oxidoreductase activity, acting on the a... |
| mmp-bicluster_0046 |
800 |
1100 |
0.45 | MMP0234, MMP0251, MMP0373, MMP0387, MMP0516, MMP0656, MMP0658, MMP0729, MMP0939, MMP1221, MMP1390, MMP1477, MMP0176, MMP0252, MMP0363, MMP0374, MMP0394, MMP0395, MMP0411, MMP0427, MMP1140, MMP1168, MMP1169, MMP1185, MMP1197, MMP1217, MMP1218, MMP0001, MMP0002 | ATP binding, adenyl nucleotide binding, adenyl ribonucleotide binding |
