Regulatory Modules
Displaying 101 - 110 of 162Methanococcus maripaludis S2
| Title | Motif 1 | Motif 2 | Residual | Bicluster Genes | Selected GO Terms |
|---|---|---|---|---|---|
| mmp-bicluster_0075 |
0.97 |
7100 |
0.32 | MMP0008, MMP0009, MMP0113, MMP0119, MMP0235, MMP0236, MMP0237, MMP0240, MMP0392, MMP0452, MMP0458, MMP0595, MMP0635, MMP0636, MMP0723, MMP0725, MMP0909, MMP0934, MMP1141, MMP1162, MMP0239, MMP0241, MMP0453, MMP1220, MMP1295 | pyridoxal phosphate binding, cofactor binding, endopeptidase activity |
| mmp-bicluster_0160 |
0.87 |
320 |
0.33 | MMP0238, MMP0038, MMP0039, MMP0040, MMP0041, MMP0086, MMP0234, MMP0235, MMP0237, MMP0240, MMP0299, MMP0452, MMP0458, MMP0595, MMP0636, MMP0656, MMP0721, MMP0722, MMP0723, MMP0783, MMP1279, MMP1608 | transcription, DNA-templated, RNA biosynthetic process, nucleic acid-templated transcription, gene expression, macromolecule biosynthetic process |
| mmp-bicluster_0071 |
0.85 |
600 |
0.31 | MMP0064, MMP0065, MMP0066, MMP0067, MMP0068, MMP0205, MMP0206, MMP0504, MMP0505, MMP0506, MMP0507, MMP0853, MMP0854, MMP0855, MMP0856, MMP0857, MMP0858, MMP0859, MMP0860, MMP1442 | ion transmembrane transporter activity, substrate-specific transmembrane transpo..., substrate-specific transporter activity, transmembrane transporter activity, monovalent inorganic cation transmembran... |
| mmp-bicluster_0126 |
0.68 |
160 |
0.41 | MMP0219, MMP0333, MMP0383, MMP0386, MMP0503, MMP0591, MMP0592, MMP0593, MMP0795, MMP0934, MMP0935, MMP1191, MMP1195, MMP1304, MMP1305, MMP1518, MMP1519, MMP1520, MMP1560, MMP1561, MMP1562, MMP1563, MMP1564, MMP1565, MMP1566, MMP1567, MMP1644, MMP1645, MMP1717, MMP1718 | anaerobic respiration, methane metabolic process, methanogenesis, energy derivation by oxidation of reduce..., cellular alkane metabolic process |
| mmp-bicluster_0081 |
0.64 |
19000 |
0.26 | MMP0212, MMP0414, MMP0550, MMP0946, MMP1063, MMP1068, MMP1105, MMP1106, MMP1353, MMP1427, MMP0297, MMP0588, MMP0596, MMP0597, MMP0899, MMP0900, MMP1131, MMP1242 | |
| mmp-bicluster_0103 |
0.61 |
35 |
0.16 | MMP1319, MMP1320, MMP1322, MMP1323, MMP1324, MMP1325, MMP1326, MMP1327, MMP1328, MMP1363, MMP1364, MMP0258 | pyruvate metabolic process, glycolytic process, carbohydrate catabolic process, single-organism carbohydrate catabolic p..., single-organism carbohydrate metabolic p... |
| mmp-bicluster_0149 |
0.6 |
150 |
0.30 | MMP0034, MMP0137, MMP0284, MMP0319, MMP0415, MMP0564, MMP0694, MMP0905, MMP0906, MMP0907, MMP0941, MMP0953, MMP1085, MMP1108, MMP1307, MMP1327, MMP1328, MMP1356, MMP1357, MMP1491, MMP1492, MMP1582, MMP1614, MMP1112, MMP1361, MMP0340 | single-organism catabolic process, catabolic process, organic substance catabolic process, organonitrogen compound catabolic proces..., small molecule metabolic process |
| mmp-bicluster_0153 |
0.48 |
190 |
0.21 | MMP0524, MMP0871, MMP0128, MMP0193, MMP0207, MMP0307, MMP0499, MMP0522, MMP0523, MMP0527, MMP0775, MMP0994, MMP1202, MMP1203, MMP1238, MMP1494, MMP1578, MMP1636, MMP0426 | nucleic acid binding transcription facto..., sequence-specific DNA binding transcript..., 2 iron, 2 sulfur cluster binding |
| mmp-bicluster_0058 |
0.39 |
1200 |
0.49 | MMP0050, MMP0051, MMP0097, MMP0180, MMP0210, MMP0369, MMP0480, MMP0487, MMP0613, MMP0712, MMP0722, MMP0757, MMP0788, MMP0922, MMP0923, MMP1134, MMP1135, MMP1136, MMP1229, MMP1439, MMP0059, MMP0096, MMP0181, MMP0209, MMP0256, MMP0257, MMP1493, MMP1550, MMP0734, MMP0932, MMP0524 | intramolecular transferase activity, coenzyme binding, FMN binding, cofactor binding, sequence-specific DNA binding |
| mmp-bicluster_0033 |
0.32 |
260 |
0.21 | MMP0304, MMP0307, MMP0311, MMP0599, MMP0691, MMP0693, MMP0903, MMP1060, MMP1234, MMP1387, MMP1683, MMP0305, MMP0306, MMP0600, MMP1059 | oxidoreductase activity, catalytic activity, endodeoxyribonuclease activity, deoxyribonuclease activity |
