Regulatory Modules
Displaying 41 - 50 of 162Methanococcus maripaludis S2
| Title | Motif 1 | Motif 2 | Residual | Bicluster Genes | Selected GO Terms |
|---|---|---|---|---|---|
| mmp-bicluster_0101 |
0.00000000034 |
130 |
0.35 | RNA_19, RNA_31, RNA_43, RNA_6, MMP0139, MMP0254, MMP0459, MMP0509, MMP0512, MMP1684, RNA_14, RNA_45, RNA_46, RNA_47, RNA_48, RNA_49, RNA_1, RNA_27, RNA_13, RNA_16, RNA_2, RNA_20, RNA_22, RNA_23, RNA_24, RNA_26, RNA_3, RNA_5, RNA_7, RNA_8 | formylmethanofuran dehydrogenase activit..., oxidoreductase activity, formate dehydrogenase (NAD+) activity, oxidoreductase activity, acting on the a... |
| mmp-bicluster_0056 |
15 |
130 |
0.13 | MMP0627, MMP1544, MMP1545, MMP1546, MMP1547, MMP0259, MMP0260, MMP0626 | large ribosomal subunit, ribosome, organelle, non-membrane-bounded organelle, intracellular organelle |
| mmp-bicluster_0063 |
51 |
130 |
0.16 | MMP0952, MMP1360, MMP1362, MMP1371, MMP1406, MMP1543, MMP1658, MMP1148, MMP0156, MMP1544, MMP1545 | regulation of biosynthetic process, regulation of gene expression, regulation of macromolecule biosynthetic..., regulation of metabolic process, regulation of cellular metabolic process |
| mmp-bicluster_0050 |
65 |
130 |
0.34 | MMP0123, MMP0558, MMP0622, MMP0624, MMP0683, MMP0692, MMP0864, MMP0912, MMP1220, MMP1237, MMP1654, MMP0184, MMP0373, MMP0387, MMP0633, MMP1475, MMP1613, MMP1635, MMP0913, MMP0914 | iron ion binding, hydrolase activity, acting on glycosyl b... |
| mmp-bicluster_0065 |
0.0046 |
140 |
0.34 | MMP0241, MMP0254, MMP0276, MMP0642, MMP0753, MMP1029, MMP1636, MMP1684, MMP0070, MMP0570, MMP0643, MMP0764, MMP0765, MMP0770, MMP0915, MMP0916, MMP0991, MMP1053, MMP1054 | oxidoreductase activity, acting on a sul... |
| mmp-bicluster_0149 |
0.6 |
150 |
0.30 | MMP0034, MMP0137, MMP0284, MMP0319, MMP0415, MMP0564, MMP0694, MMP0905, MMP0906, MMP0907, MMP0941, MMP0953, MMP1085, MMP1108, MMP1307, MMP1327, MMP1328, MMP1356, MMP1357, MMP1491, MMP1492, MMP1582, MMP1614, MMP1112, MMP1361, MMP0340 | single-organism catabolic process, catabolic process, organic substance catabolic process, organonitrogen compound catabolic proces..., small molecule metabolic process |
| mmp-bicluster_0126 |
0.68 |
160 |
0.41 | MMP0219, MMP0333, MMP0383, MMP0386, MMP0503, MMP0591, MMP0592, MMP0593, MMP0795, MMP0934, MMP0935, MMP1191, MMP1195, MMP1304, MMP1305, MMP1518, MMP1519, MMP1520, MMP1560, MMP1561, MMP1562, MMP1563, MMP1564, MMP1565, MMP1566, MMP1567, MMP1644, MMP1645, MMP1717, MMP1718 | anaerobic respiration, methane metabolic process, methanogenesis, energy derivation by oxidation of reduce..., cellular alkane metabolic process |
| mmp-bicluster_0074 |
9 |
180 |
0.17 | MMP0913, MMP0914, MMP0961, MMP0962, MMP0963, MMP1154, MMP1155, MMP1156, MMP1157, MMP1158, MMP1159, MMP1161, MMP1163, MMP0912, MMP1160 | cellular ion homeostasis, chemical homeostasis, ion homeostasis, cellular chemical homeostasis, inorganic ion homeostasis |
| mmp-bicluster_0153 |
0.48 |
190 |
0.21 | MMP0524, MMP0871, MMP0128, MMP0193, MMP0207, MMP0307, MMP0499, MMP0522, MMP0523, MMP0527, MMP0775, MMP0994, MMP1202, MMP1203, MMP1238, MMP1494, MMP1578, MMP1636, MMP0426 | nucleic acid binding transcription facto..., sequence-specific DNA binding transcript..., 2 iron, 2 sulfur cluster binding |
| mmp-bicluster_0083 |
6.9 |
190 |
0.36 | MMP0177, MMP0283, MMP0585, MMP0940, MMP1118, MMP1250, MMP1568, MMP1569, MMP1720, MMP1721, MMP0129, MMP0421, MMP0422, MMP0692, MMP0848, MMP0976, MMP1058, MMP1221, MMP1227, MMP1397, MMP1428, MMP1551, MMP1607, MMP0660 | organic cyclic compound binding, heterocyclic compound binding |
