Regulatory Modules
Displaying 41 - 50 of 162Methanococcus maripaludis S2
Title | Motif 1 | Motif 2 | Residual | Bicluster Genes | Selected GO Terms |
---|---|---|---|---|---|
mmp-bicluster_0135 | 1.6 | 650 | 0.22 | MMP1435, MMP1436, MMP1038, MMP1039, MMP1040, MMP1041, MMP1042, MMP1043, MMP1044, MMP1045, MMP1046, MMP1047, MMP1370, MMP1523, MMP1524 | ion transport, single-organism transport, single-organism localization, transport, establishment of localization |
mmp-bicluster_0138 | 120 | 4000 | 0.22 | MMP0060, MMP0061, MMP0062, MMP0150, MMP0151, MMP0245, MMP0574, MMP0575, MMP0576, MMP0577, MMP0578, MMP1147, MMP1579 | ribonucleoprotein complex biogenesis, ribosome biogenesis, dicarboxylic acid metabolic process, cellular component organization, cellular component assembly |
mmp-bicluster_0110 | 690 | 1300 | 0.22 | MMP0560, MMP0741, MMP0751, MMP0781, MMP0804, MMP1309, MMP1572, MMP0090, MMP0114, MMP0436, MMP0515, MMP0551, MMP0752, MMP0805, MMP0957, MMP1179, MMP1631 | cellular component organization, cellular component assembly |
mmp-bicluster_0165 | 0.0000000000000037 | 0.0016 | 0.23 | RNA_1, RNA_13, RNA_16, RNA_19, RNA_2, RNA_20, RNA_22, RNA_23, RNA_24, RNA_26, RNA_27, RNA_3, RNA_31, RNA_43, RNA_5, RNA_50, RNA_6, RNA_7, RNA_8, RNA_9 | |
mmp-bicluster_0087 | 360 | 3800 | 0.23 | MMP0033, MMP0036, MMP0092, MMP0246, MMP0247, MMP0248, MMP0403, MMP0404, MMP0603, MMP0604, MMP0707, MMP1582, MMP0155, MMP0316, MMP0384, MMP0398, MMP0412, MMP0671, MMP0878, MMP1425, MMP1480, MMP1710 | RNA metabolic process |
mmp-bicluster_0122 | 7.5 | 710 | 0.23 | MMP0131, MMP0185, MMP0222, MMP0329, MMP0330, MMP1086, MMP1132, MMP1133, MMP1491, MMP1521, MMP0291, MMP0910, MMP0938, MMP1659 | pyrimidine-containing compound metabolic..., pyrimidine-containing compound biosynthe..., vitamin metabolic process, water-soluble vitamin metabolic process, vitamin biosynthetic process |
mmp-bicluster_0010 | 0.0042 | 1200 | 0.23 | MMP0984, MMP0985, MMP1152, MMP1153, MMP1271, MMP1272, MMP1273, MMP1274, MMP1275, MMP1469, MMP1502, MMP1503, MMP1504, MMP1505, MMP1506, MMP1507, MMP1621, MMP1622, MMP1623, MMP1624, MMP1625, MMP1626, MMP1627, MMP1628, MMP1629 | energy derivation by oxidation of organi..., cellular respiration, oxidation-reduction process, generation of precursor metabolites and ..., nucleoside triphosphate metabolic proces... |
mmp-bicluster_0076 | 440 | 6800 | 0.23 | MMP0002, MMP0054, MMP0055, MMP0269, MMP0527, MMP0630, MMP0885, MMP0995, MMP1002, MMP1003, MMP1004, MMP1005, MMP1006, MMP1007, MMP1008, MMP1598, MMP1599, MMP0678 | plasma membrane, cell periphery, carbon-carbon lyase activity, hydro-lyase activity, carbon-oxygen lyase activity |
mmp-bicluster_0061 | 5600 | 7800 | 0.23 | MMP0043, MMP0060, MMP0061, MMP0155, MMP0249, MMP0250, MMP0384, MMP0457, MMP1579, MMP0045, MMP0440, MMP0441, MMP0442, MMP1208, MMP1399, MMP1434, MMP1443, MMP1444, MMP1445, MMP1472, MMP0062, MMP1400, MMP1401, MMP1403 | ribonucleoprotein complex biogenesis, ribosome biogenesis, cellular component biogenesis, cellular component organization or bioge..., cytoplasmic part |
mmp-bicluster_0159 | 0.0000000012 | 2400 | 0.23 | MMP0115, MMP0190, MMP0496, MMP0543, MMP0546, MMP0710, MMP0785, MMP1012, MMP1164, MMP1256, MMP1293, MMP1329, MMP1331, MMP1332, MMP1338, MMP1553 | glutamine family amino acid biosynthetic..., dicarboxylic acid metabolic process, glutamine family amino acid metabolic pr..., oxidoreductase activity, oxidoreductase activity, acting on a sul... |