Regulatory Modules

Displaying 1 - 10 of 1058Desulfovibrio vulgaris Hildenborough
Title Motif 1 Motif 2 Residual Bicluster Genes Selected GO Terms
bicluster_0001 3100 11000 0.41 DVU0383, DVU0824, DVU0964, DVU1243, DVU1790, DVU1962, DVU2120, DVU2139, DVU2169, DVU2326, DVU2602, DVU2622, DVU2915 glutamate metabolic process, dicarboxylic acid metabolic process, cellular amino acid catabolic process, organic acid catabolic process, small molecule catabolic process
bicluster_0002 120 7800 0.42 DVU0078, DVU0382, DVU0443, DVU0920, DVU1112, DVU1487, DVU1489, DVU2168, DVU2539, DVU2741, DVU2881 exonuclease activity, nuclease activity, hydrolase activity, acting on ester bond...
bicluster_0003 480 2300 0.40 DVU0230, DVU0426, DVU1482, DVU1699, DVU1957, DVU2158, DVU2249, DVU2296, DVU2343, DVU2432, DVU2567, DVU3078, DVU3249, DVU3251, DVUA0046 cell wall organization, cell wall organization or biogenesis, external encapsulating structure organiz..., inorganic anion transmembrane transporte..., anion transmembrane transporter activity
bicluster_0004 3.1 2600 0.45 DVU0483, DVU0595, DVU0662, DVU0663, DVU0664, DVU0725, DVU0812, DVU1013, DVU1212, DVU1629, DVU1839, DVU1874, DVU2324, DVU2439, DVU2467, DVU2468, DVU2469, DVU2974, DVU3283, DVU3316 sulfur amino acid metabolic process, sulfur amino acid biosynthetic process, serine family amino acid metabolic proce..., cellular amino acid metabolic process, O-acyltransferase activity
bicluster_0008 0.00000000018 0.00000000027 0.45 DVU0252, DVU0268, DVU0472, DVU0473, DVU0553, DVU0630, DVU0916, DVU0939, DVU1015, DVU1155, DVU1285, DVU1637, DVU1638, DVU1639, DVU1646, DVU2145, DVU2146, DVU2725, DVU2726, DVU3080 O-acyltransferase activity, acetyltransferase activity
bicluster_0009 12000 13000 0.47 DVU0084, DVU0087, DVU0088, DVU0091, DVU0141, DVU0142, DVU0323, DVU0324, DVU0651, DVU0794, DVU1029, DVU1185, DVU1189, DVU1369, DVU1370, DVU1459, DVU1540, DVU1860, DVU1863, DVU2257, DVU2320, DVU2461, DVU2558, DVU3297, DVU2634 coenzyme metabolic process, cofactor metabolic process, alpha-amino acid biosynthetic process, cellular amino acid biosynthetic process, organonitrogen compound biosynthetic pro...
bicluster_0010 3.1 1500 0.48 DVU0161, DVU0162, DVU0399, DVU0503, DVU0507, DVU0508, DVU0510, DVU0511, DVU0957, DVU1077, DVU1078, DVU1202, DVU1207, DVU1298, DVU1299, DVU1300, DVU1575, DVU1622, DVU2231, DVU2913, DVU2914, DVU2923, DVU3308, DVU3310, DVU3368 nucleobase-containing compound biosynthe..., cellular nitrogen compound biosynthetic ..., aromatic compound biosynthetic process, ribonucleoside monophosphate biosyntheti..., nucleoside monophosphate biosynthetic pr...
bicluster_0011 0.1 3700 0.49 DVU0170, DVU0729, DVU0820, DVU0821, DVU0822, DVU0912, DVU0937, DVU1121, DVU1263, DVU1773, DVU1774, DVU1811, DVU1812, DVU2107, DVU2117, DVU2264, DVU2304, DVU2345, DVU2585, DVU2615, DVU2616, DVU2676, DVU2833, DVU3045, DVU3107, DVU3155, DVUA0025 endopeptidase activity, peptidase activity, acting on L-amino ac..., peptidase activity, copper ion binding, hydrolase activity
bicluster_0014 150 1300 0.50 DVU0072, DVU0076, DVU0080, DVU0328, DVU0425, DVU0428, DVU0439, DVU0441, DVU0478, DVU0638, DVU0680, DVU0691, DVU0743, DVU1004, DVU1051, DVU1064, DVU1423, DVU1425, DVU1452, DVU1607, DVU1926, DVU2568, DVU2583, DVU2627, DVU2673, DVU2779, DVU3113, DVU3127, DVU3296 organonitrogen compound catabolic proces..., single-organism catabolic process, cellular catabolic process, catabolic process, organic substance catabolic process
bicluster_0015 3200 17000 0.50 DVU0022, DVU0117, DVU0286, DVU0539, DVU0621, DVU0681, DVU0807, DVU1163, DVU2023, DVU2041, DVU2502, DVU2661, DVU2736, DVU2906, DVU2994, DVU3000, DVU3007, DVU3128, DVUA0125 DNA repair, cellular response to DNA damage stimulus, cellular response to stress, DNA metabolic process, copper ion binding