Desulfovibrio vulgaris Hildenborough Module 1 Residual: 0.41

Residual: 0.41 Score: -53.8298 version: dvh_cmonkey_11_Mar_02
DVU0383 Uncharacterized protein

Details for DVU0383 - Uncharacterized protein

GO Terms: GO:0009055, GO:0020037

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0383

Tuberculist Genomic Region

DVU2139 Histone deacetylase family protein

Details for DVU2139 - Histone deacetylase family protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2139

Tuberculist Genomic Region

DVU0824 Uncharacterized protein

Details for DVU0824 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0824

Tuberculist Genomic Region

DVU2169 Uncharacterized protein

Details for DVU2169 - Uncharacterized protein

GO Terms: GO:0019028

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2169

Tuberculist Genomic Region

DVU0964 Glu/Leu/Phe/Val dehydrogenase family protein

Details for DVU0964 - Glu/Leu/Phe/Val dehydrogenase family protein

GO Terms: GO:0019551, GO:0004352

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0964

Tuberculist Genomic Region

DVU2326 Conserved domain protein

Details for DVU2326 - Conserved domain protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2326

Tuberculist Genomic Region

DVU1243 Uncharacterized protein

Details for DVU1243 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1243

Tuberculist Genomic Region

DVU2602 Conserved domain protein

Details for DVU2602 - Conserved domain protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2602

Tuberculist Genomic Region

DVU1790 Endonuclease MutS2

Details for DVU1790 - Endonuclease MutS2

GO Terms: GO:0005524, GO:0016887, GO:0004519, GO:0006298, GO:0030983, GO:0045910

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1790

Tuberculist Genomic Region

DVU2622 Uncharacterized protein

Details for DVU2622 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2622

Tuberculist Genomic Region

DVU1962 Methyl-accepting chemotaxis protein

Details for DVU1962 - Methyl-accepting chemotaxis protein

GO Terms: GO:0016021, GO:0004871

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1962

Tuberculist Genomic Region

DVU2915 Uncharacterized protein

Details for DVU2915 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2915

Tuberculist Genomic Region

DVU2120 Uncharacterized protein

Details for DVU2120 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2120

Tuberculist Genomic Region

Motif 1: e-value: 3100 e-value: 11000
Regulator Interaction Influence Weight Other Influences
[field_regulator_taxonomy_regulat_1] down-regulates -0.22
Sigma-54 dependent transcriptional regulator/response regulator
down-regulates -0.11
Transcriptional regulator, rrf2 protein, putative
up-regulates 0.12
Sigma-54 dependent transcriptional regulator
down-regulates -0.11
[field_regulator_taxonomy_regulat_1] up-regulates 0.12
Transcriptional regulatory protein
up-regulates 0.13
Transcriptional regulator, putative
down-regulates -0.13
Sigma-54 dependent transcriptional regulator/response regulator
down-regulates -0.16
DNA-binding response regulator
up-regulates 0.10
Transcriptional regulator, AraC family
down-regulates -0.20
Category: BP
Category GO ID GO Term Annotated Expected Significant p-value
BP GO:0006536 glutamate metabolic process 4 0.01 1 0.0108
BP GO:0043648 dicarboxylic acid metabolic process 4 0.01 1 0.0108
BP GO:0009063 cellular amino acid catabolic process 6 0.02 1 0.0163
BP GO:0016054 organic acid catabolic process 6 0.02 1 0.0163
BP GO:0044282 small molecule catabolic process 6 0.02 1 0.0163
BP GO:0046395 carboxylic acid catabolic process 6 0.02 1 0.0163
BP GO:1901606 alpha-amino acid catabolic process 6 0.02 1 0.0163
BP GO:1901565 organonitrogen compound catabolic proces... 7 0.02 1 0.0190
BP GO:0044712 single-organism catabolic process 8 0.02 1 0.0217
BP GO:0009064 glutamine family amino acid metabolic pr... 9 0.02 1 0.0244
BP GO:0044248 cellular catabolic process 10 0.03 1 0.0271
BP GO:0009056 catabolic process 12 0.03 1 0.0325
BP GO:1901575 organic substance catabolic process 12 0.03 1 0.0325
Category: CC
Category GO ID GO Term Annotated Expected Significant p-value
CC GO:0019012 virion 3 0.02 1 0.0150
CC GO:0019028 viral capsid 3 0.02 1 0.0150
CC GO:0044423 virion part 3 0.02 1 0.0150
Category: MF
Category GO ID GO Term Annotated Expected Significant p-value
MF GO:0009055 electron carrier activity 16 0.02 1 0.0250
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