Desulfovibrio vulgaris Hildenborough Module 15 Residual: 0.50

Residual: 0.50 Score: -31.8281 version: dvh_cmonkey_11_Mar_02
DVU0022 HAMP domain/GGDEF domain/EAL domain protein

Details for DVU0022 - HAMP domain/GGDEF domain/EAL domain protein

GO Terms: GO:0016021, GO:0004871

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0022

Tuberculist Genomic Region

DVU2502 UDP-N-acetylenolpyruvoylglucosamine reductase

Details for DVU2502 - UDP-N-acetylenolpyruvoylglucosamine reductase

GO Terms: GO:0008762, GO:0007049, GO:0051301, GO:0071555, GO:0005737, GO:0050660, GO:0009252, GO:0008360

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2502

Tuberculist Genomic Region

DVU0117 Glycosyl transferase, group 2 family protein

Details for DVU0117 - Glycosyl transferase, group 2 family protein

GO Terms: GO:0016740

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0117

Tuberculist Genomic Region

DVU2661 Twin-arginine translocation pathway signal sequence domain protein

Details for DVU2661 - Twin-arginine translocation pathway signal sequence domain protein

GO Terms: GO:0005507

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2661

Tuberculist Genomic Region

DVU0286 Imidazole glycerol phosphate synthase subunit HisF

Details for DVU0286 - Imidazole glycerol phosphate synthase subunit HisF

GO Terms: GO:0005737, GO:0000105, GO:0000107, GO:0016829

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0286

Tuberculist Genomic Region

DVU2736 Uncharacterized protein

Details for DVU2736 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2736

Tuberculist Genomic Region

DVU0539 Sigma-54 dependent DNA-binding response regulator

Details for DVU0539 - Sigma-54 dependent DNA-binding response regulator

GO Terms: GO:0005524, GO:0000160, GO:0006355, GO:0043565, GO:0006351

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0539

Tuberculist Genomic Region

DVU2906 UmuC protein

Details for DVU2906 - UmuC protein

GO Terms: GO:0006281, GO:0003887, GO:0003684

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2906

Tuberculist Genomic Region

DVU0621 Sigma-54 dependent DNA-binding response regulator

Details for DVU0621 - Sigma-54 dependent DNA-binding response regulator

GO Terms: GO:0005524, GO:0003677, GO:0000160, GO:0006355, GO:0006351

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0621

Tuberculist Genomic Region

DVU2994 Glycosyl transferase, group 2 family protein

Details for DVU2994 - Glycosyl transferase, group 2 family protein

GO Terms: GO:0016740

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2994

Tuberculist Genomic Region

DVU0681 Sensor histidine kinase/response regulator

Details for DVU0681 - Sensor histidine kinase/response regulator

GO Terms: GO:0016020, GO:0000155

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0681

Tuberculist Genomic Region

DVU3000 Uncharacterized protein

Details for DVU3000 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU3000

Tuberculist Genomic Region

DVU0807 tRNA-specific 2-thiouridylase MnmA

Details for DVU0807 - tRNA-specific 2-thiouridylase MnmA

GO Terms: GO:0005524, GO:0005737, GO:0016783, GO:0000049, GO:0006400

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0807

Tuberculist Genomic Region

DVU3007 Uncharacterized protein

Details for DVU3007 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU3007

Tuberculist Genomic Region

DVU1163 Major facilitator superfamily protein

Details for DVU1163 - Major facilitator superfamily protein

GO Terms: GO:0016021, GO:0055085

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1163

Tuberculist Genomic Region

DVU3128 Lipoprotein, putative

Details for DVU3128 - Lipoprotein, putative

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU3128

Tuberculist Genomic Region

DVU2023 Uncharacterized protein

Details for DVU2023 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2023

Tuberculist Genomic Region

DVUA0125 Transglycosylase, SLT family

Details for DVUA0125 - Transglycosylase, SLT family

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVUA0125

Tuberculist Genomic Region

DVU2041 Uncharacterized protein

Details for DVU2041 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2041

Tuberculist Genomic Region

Motif 1: e-value: 3200 e-value: 17000
Regulator Interaction Influence Weight Other Influences
Transcriptional regulator, GntR family
up-regulates 0.21
Transcriptional regulator, putative
up-regulates 0.24
Sigma-54 dependent transcriptional regulator
up-regulates 0.26
Category: BP
Category GO ID GO Term Annotated Expected Significant p-value
BP GO:0006281 DNA repair 5 0.01 1 0.0140
BP GO:0006974 cellular response to DNA damage stimulus 5 0.01 1 0.0140
BP GO:0033554 cellular response to stress 8 0.02 1 0.0220
BP GO:0006259 DNA metabolic process 17 0.05 1 0.0460
Category: MF
Category GO ID GO Term Annotated Expected Significant p-value
MF GO:0005507 copper ion binding 3 0.02 1 0.0160
MF GO:0008762 UDP-N-acetylmuramate dehydrogenase activ... 5 0.03 1 0.0270
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