Desulfovibrio vulgaris Hildenborough Module 71 Residual: 0.48

Residual: 0.48 Score: -36.6653 version: dvh_cmonkey_11_Mar_02
DVU0275 Polysaccharide deacetylase family protein

Details for DVU0275 - Polysaccharide deacetylase family protein

GO Terms: GO:0005975, GO:0016810

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0275

Tuberculist Genomic Region

DVU2937 TPR domain protein/response regulator receiver domain protein

Details for DVU2937 - TPR domain protein/response regulator receiver domain protein

GO Terms: GO:0000160

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2937

Tuberculist Genomic Region

DVU0453 DNA helicase

Details for DVU0453 - DNA helicase

GO Terms: GO:0005524, GO:0004003, GO:0003677

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0453

Tuberculist Genomic Region

DVU3226 Uncharacterized protein

Details for DVU3226 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU3226

Tuberculist Genomic Region

DVU0754 Uncharacterized protein

Details for DVU0754 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0754

Tuberculist Genomic Region

DVU3227 Flagellar basal body-associated protein, putative

Details for DVU3227 - Flagellar basal body-associated protein, putative

GO Terms: GO:0009425, GO:0071973, GO:0006935

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU3227

Tuberculist Genomic Region

DVU0938 Isoamylase N-terminal domain protein

Details for DVU0938 - Isoamylase N-terminal domain protein

GO Terms: GO:0005975, GO:0004553

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0938

Tuberculist Genomic Region

DVU0276 Uncharacterized protein

Details for DVU0276 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0276

Tuberculist Genomic Region

DVU1180 Uncharacterized protein

Details for DVU1180 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1180

Tuberculist Genomic Region

DVU0565 Glyceraldehyde-3-phosphate dehydrogenase

Details for DVU0565 - Glyceraldehyde-3-phosphate dehydrogenase

GO Terms: GO:0051287, GO:0050661, GO:0006006, GO:0016620

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0565

Tuberculist Genomic Region

DVU1449 Anti-sigma factor antagonist

Details for DVU1449 - Anti-sigma factor antagonist

GO Terms: GO:0006355

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1449

Tuberculist Genomic Region

DVU0566 GAF domain protein

Details for DVU0566 - GAF domain protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0566

Tuberculist Genomic Region

DVU1450 Anti-sigma factor, putative

Details for DVU1450 - Anti-sigma factor, putative

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1450

Tuberculist Genomic Region

DVU1244 Uncharacterized protein

Details for DVU1244 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1244

Tuberculist Genomic Region

DVU1471 Heat shock protein, Hsp20 family

Details for DVU1471 - Heat shock protein, Hsp20 family

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1471

Tuberculist Genomic Region

DVU1528 tRNA-specific adenosine deaminase

Details for DVU1528 - tRNA-specific adenosine deaminase

GO Terms: GO:0002100, GO:0052717, GO:0008270

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1528

Tuberculist Genomic Region

DVU2059 Glycosyl transferase, group 2 family protein

Details for DVU2059 - Glycosyl transferase, group 2 family protein

GO Terms: GO:0016740

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2059

Tuberculist Genomic Region

DVU1529 Decarboxylase family protein

Details for DVU1529 - Decarboxylase family protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1529

Tuberculist Genomic Region

DVU2684 Uncharacterized protein

Details for DVU2684 - Uncharacterized protein

GO Terms: GO:0010181, GO:0035438, GO:0016491

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2684

Tuberculist Genomic Region

DVU1656 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase

Details for DVU1656 - 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase

GO Terms: GO:0003848, GO:0009396, GO:0016301

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1656

Tuberculist Genomic Region

DVU2770 Response regulator

Details for DVU2770 - Response regulator

GO Terms: GO:0000160

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2770

Tuberculist Genomic Region

DVU1867 Diaminopimelate epimerase

Details for DVU1867 - Diaminopimelate epimerase

GO Terms: GO:0005737, GO:0008837, GO:0009089

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1867

Tuberculist Genomic Region

DVU2840 Uncharacterized protein

Details for DVU2840 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2840

Tuberculist Genomic Region

DVU2060 Uncharacterized protein

Details for DVU2060 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2060

Tuberculist Genomic Region

DVU2935 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase

Details for DVU2935 - 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase

GO Terms: GO:0046538, GO:0006096

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2935

Tuberculist Genomic Region

DVU2427 Uncharacterized protein

Details for DVU2427 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2427

Tuberculist Genomic Region

Motif 1: e-value: 600 e-value: 13000
Regulator Interaction Influence Weight Other Influences
Sigma-54 dependent transcriptional regulator/response regulator
up-regulates 0.11
Transcriptional regulator, rrf2 protein, putative
down-regulates -0.11
Sigma-54 dependent transcriptional regulator/response regulator
up-regulates 0.13
DNA-binding protein
up-regulates 0.14
Sigma-54 dependent transcriptional regulator/response regulator
up-regulates 0.11
DNA-binding response regulator, LuxR family
up-regulates 0.17
Sigma-54 dependent transcriptional regulator
up-regulates 0.14
Category: BP
Category GO ID GO Term Annotated Expected Significant p-value
BP GO:0010467 gene expression 14 0.23 2 0.0180
BP GO:0016070 RNA metabolic process 15 0.24 2 0.0210
BP GO:0050789 regulation of biological process 51 0.83 3 0.0370
BP GO:0050794 regulation of cellular process 51 0.83 3 0.0370
BP GO:0065007 biological regulation 55 0.89 3 0.0450
Category: MF
Category GO ID GO Term Annotated Expected Significant p-value
MF GO:0016866 intramolecular transferase activity 3 0.01 1 0.0140
MF GO:0050662 coenzyme binding 42 0.20 2 0.0145
MF GO:0048037 cofactor binding 56 0.26 2 0.0251
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