Desulfovibrio vulgaris Hildenborough Module 110 Residual: 0.48

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Summary

Residual: 0.48 Score: -40.9883 version: dvh_cmonkey_11_Mar_02

Members

DVU0298 Uncharacterized protein

Details for DVU0298 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0298

Tuberculist Genomic Region

DVU0727 Uncharacterized protein

Details for DVU0727 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0727

Tuberculist Genomic Region

DVU0421 Agmatinase, putative

Details for DVU0421 - Agmatinase, putative

GO Terms: GO:0016813, GO:0046872

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0421

Tuberculist Genomic Region

DVU0728 Uncharacterized protein

Details for DVU0728 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0728

Tuberculist Genomic Region

DVU0866 1-deoxy-D-xylulose 5-phosphate reductoisomerase

Details for DVU0866 - 1-deoxy-D-xylulose 5-phosphate reductoisomerase

GO Terms: GO:0030604, GO:0070402, GO:0019288, GO:0046872, GO:0016114

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0866

Tuberculist Genomic Region

DVU0756 TPR domain protein

Details for DVU0756 - TPR domain protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0756

Tuberculist Genomic Region

DVU0955 Alanine racemase

Details for DVU0955 - Alanine racemase

GO Terms: GO:0030632, GO:0008784, GO:0030170

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0955

Tuberculist Genomic Region

DVU0801 UvrABC system protein C

Details for DVU0801 - UvrABC system protein C

GO Terms: GO:0003677, GO:0009432, GO:0005737, GO:0009381, GO:0009380, GO:0006289

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0801

Tuberculist Genomic Region

DVU1554 Radical SAM domain protein

Details for DVU1554 - Radical SAM domain protein

GO Terms: GO:0051539, GO:0003824, GO:0046872

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1554

Tuberculist Genomic Region

DVU0985 Uncharacterized protein

Details for DVU0985 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0985

Tuberculist Genomic Region

DVU1644 Permease, putative

Details for DVU1644 - Permease, putative

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1644

Tuberculist Genomic Region

DVU1013 Type I secretion outer membrane protein, TolC family

Details for DVU1013 - Type I secretion outer membrane protein, TolC family

GO Terms: GO:0019867, GO:0005215

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1013

Tuberculist Genomic Region

DVU1645 Transcriptional regulator, ArsR family

Details for DVU1645 - Transcriptional regulator, ArsR family

GO Terms: GO:0003677, GO:0003700, GO:0006351

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1645

Tuberculist Genomic Region

DVU1151 Uncharacterized protein

Details for DVU1151 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1151

Tuberculist Genomic Region

DVU2282 Uncharacterized protein

Details for DVU2282 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2282

Tuberculist Genomic Region

DVU1628 RNA polymerase sigma-54 factor

Details for DVU1628 - RNA polymerase sigma-54 factor

GO Terms: GO:0003677, GO:0003899, GO:0006352, GO:0003700, GO:0016987

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1628

Tuberculist Genomic Region

DVU2548 FMN-dependent NADH-azoreductase

Details for DVU2548 - FMN-dependent NADH-azoreductase

GO Terms: GO:0010181, GO:0008752, GO:0009055, GO:0016652, GO:0016661

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2548

Tuberculist Genomic Region

DVU2309 Methyl-accepting chemotaxis protein, putative

Details for DVU2309 - Methyl-accepting chemotaxis protein, putative

GO Terms: GO:0016021, GO:0004871

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2309

Tuberculist Genomic Region

DVU2662 Uncharacterized protein

Details for DVU2662 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2662

Tuberculist Genomic Region

DVU2362 Thiamine-phosphate synthase

Details for DVU2362 - Thiamine-phosphate synthase

GO Terms: GO:0000287, GO:0009228, GO:0009229, GO:0004789

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2362

Tuberculist Genomic Region

DVU3079 Glyoxalase family protein

Details for DVU3079 - Glyoxalase family protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU3079

Tuberculist Genomic Region

DVU2439 Efflux transporter, RND family, MFP subunit

Details for DVU2439 - Efflux transporter, RND family, MFP subunit

GO Terms: GO:0016020, GO:0055085

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2439

Tuberculist Genomic Region

DVU3135 Flavodoxin-like fold domain protein

Details for DVU3135 - Flavodoxin-like fold domain protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU3135

Tuberculist Genomic Region

DVU3316 Dihydroorotate dehydrogenase

Details for DVU3316 - Dihydroorotate dehydrogenase

GO Terms: GO:0006207, GO:0006222, GO:0005737, GO:0004152

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU3316

Tuberculist Genomic Region

DVU3136 Nitroreductase family protein

Details for DVU3136 - Nitroreductase family protein

GO Terms: GO:0016491

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU3136

Tuberculist Genomic Region

Displaying 1 - 25 of 25

Motifs

Motif 1: e-value: 0.0031 e-value: 66

Module Plots

Regulation

Regulator Interaction Influence Weight Other Influences

DVU0813

Heat-inducible transcription repressor HrcA
 up-regulates 0.53

DVU0813

DVU1730

DNA-binding protein
 up-regulates 0.35

DVU1730

GO Enrichment

Category: MF
Category GO ID GO Term Annotated Expected Significant p-value
MF GO:0000287 magnesium ion binding 3 0.02 1 0.0210
Category: BP
Category GO ID GO Term Annotated Expected Significant p-value
BP GO:1901566 organonitrogen compound biosynthetic pro... 68 0.37 2 0.0336
BP GO:0044711 single-organism biosynthetic process 82 0.44 2 0.0489

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