Desulfovibrio vulgaris Hildenborough Module 132 Residual: 0.48

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Summary

Residual: 0.48 Score: -32.7094 version: dvh_cmonkey_11_Mar_02

Members

DVU0006 Universal stress protein family

Details for DVU0006 - Universal stress protein family

GO Terms: GO:0006950

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0006

Tuberculist Genomic Region

DVU1904 Chemotaxis protein CheW

Details for DVU1904 - Chemotaxis protein CheW

GO Terms: GO:0006935, GO:0005622, GO:0004871

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1904

Tuberculist Genomic Region

DVU0138 Response regulator

Details for DVU0138 - Response regulator

GO Terms: GO:0000160

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0138

Tuberculist Genomic Region

DVU2076 Chemotaxis protein methyltransferase

Details for DVU2076 - Chemotaxis protein methyltransferase

GO Terms: GO:0008983

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2076

Tuberculist Genomic Region

DVU0238 Uncharacterized protein

Details for DVU0238 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0238

Tuberculist Genomic Region

DVU2351 Uncharacterized protein

Details for DVU2351 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2351

Tuberculist Genomic Region

DVU0305 Ferredoxin II

Details for DVU0305 - Ferredoxin II

GO Terms: GO:0009055, GO:0005506, GO:0051536

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0305

Tuberculist Genomic Region

DVU2625 Uncharacterized protein

Details for DVU2625 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2625

Tuberculist Genomic Region

DVU0629 Transcriptional regulator, TetR family

Details for DVU0629 - Transcriptional regulator, TetR family

GO Terms: GO:0003677, GO:0006355, GO:0006351

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0629

Tuberculist Genomic Region

DVU2973 Integration host factor, beta subunit

Details for DVU2973 - Integration host factor, beta subunit

GO Terms: GO:0003677

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2973

Tuberculist Genomic Region

DVU0986 Uncharacterized protein

Details for DVU0986 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0986

Tuberculist Genomic Region

DVU0042 RNA methyltransferase, TrmH family, group 3

Details for DVU0042 - RNA methyltransferase, TrmH family, group 3

GO Terms: GO:0003723, GO:0008173, GO:0006396

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0042

Tuberculist Genomic Region

DVU0987 Heavy metal-binding domain protein

Details for DVU0987 - Heavy metal-binding domain protein

GO Terms: GO:0046872, GO:0030001

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0987

Tuberculist Genomic Region

DVU0754 Uncharacterized protein

Details for DVU0754 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0754

Tuberculist Genomic Region

DVU1093 HAD-superfamily hydrolase, subfamily IA, variant 3

Details for DVU1093 - HAD-superfamily hydrolase, subfamily IA, variant 3

GO Terms: GO:0016787

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1093

Tuberculist Genomic Region

DVU0938 Isoamylase N-terminal domain protein

Details for DVU0938 - Isoamylase N-terminal domain protein

GO Terms: GO:0005975, GO:0004553

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0938

Tuberculist Genomic Region

DVU1470 Peptidylprolyl isomerase

Details for DVU1470 - Peptidylprolyl isomerase

GO Terms: GO:0003755

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1470

Tuberculist Genomic Region

DVU0974 Uncharacterized protein

Details for DVU0974 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0974

Tuberculist Genomic Region

DVU1568 Ferritin

Details for DVU1568 - Ferritin

GO Terms: GO:0006879, GO:0005737, GO:0008199, GO:0006826

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1568

Tuberculist Genomic Region

DVU1180 Uncharacterized protein

Details for DVU1180 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1180

Tuberculist Genomic Region

DVU1817 Cytochrome c-553

Details for DVU1817 - Cytochrome c-553

GO Terms: GO:0009055, GO:0020037, GO:0046872, GO:0055114, GO:0042597

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1817

Tuberculist Genomic Region

DVU2202 Peptidoglycan lytic exotransglycosylase

Details for DVU2202 - Peptidoglycan lytic exotransglycosylase

GO Terms: GO:0016837, GO:0009279, GO:0071555

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2202

Tuberculist Genomic Region

DVU1894 Uncharacterized protein

Details for DVU1894 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1894

Tuberculist Genomic Region

DVU2212 Uncharacterized protein

Details for DVU2212 - Uncharacterized protein

GO Terms: GO:0006777

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2212

Tuberculist Genomic Region

Displaying 1 - 24 of 24

Motifs

Motif 1: e-value: 3900 e-value: 5800

Module Plots

Regulation

Regulator Interaction Influence Weight Other Influences

DVU1949

Nif-specific regulatory protein
 down-regulates -0.15

DVU1949

DVU2802

Transcriptional regulator, GntR family
 up-regulates 0.17

DVU2802

DVU2836

Uncharacterized protein
 up-regulates 0.16

DVU2836

DVU2989

Psp operon transcriptional activator
 down-regulates -0.13

DVU2989

DVU3084

Transcriptional regulator, putative
 up-regulates 0.15

DVU3084

GO Enrichment

Category: MF
Category GO ID GO Term Annotated Expected Significant p-value
MF GO:0016859 cis-trans isomerase activity 6 0.05 1 0.0460
MF GO:0009055 electron carrier activity 16 0.12 2 0.0062
MF GO:0003755 peptidyl-prolyl cis-trans isomerase acti... 6 0.05 1 0.0460
MF GO:0008276 protein methyltransferase activity 3 0.02 1 0.0233

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