Desulfovibrio vulgaris Hildenborough Module 181 Residual: 0.47

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Summary

Residual: 0.47 Score: -31.0648 version: dvh_cmonkey_11_Mar_02

Members

DVU0009 TRAP transporter, DctM subunit

Details for DVU0009 - TRAP transporter, DctM subunit

GO Terms: GO:0016021

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0009

Tuberculist Genomic Region

DVU3267 Uncharacterized protein

Details for DVU3267 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU3267

Tuberculist Genomic Region

DVU0067 Uncharacterized protein

Details for DVU0067 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0067

Tuberculist Genomic Region

DVU0126 ABC transporter, ATP-binding protein

Details for DVU0126 - ABC transporter, ATP-binding protein

GO Terms: GO:0005524, GO:0016887, GO:0016020, GO:0006810

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0126

Tuberculist Genomic Region

DVU0102 Cation ABC transporter, periplasmic binding protein

Details for DVU0102 - Cation ABC transporter, periplasmic binding protein

GO Terms: GO:0046872, GO:0030001

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0102

Tuberculist Genomic Region

DVU0249 Uncharacterized protein

Details for DVU0249 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0249

Tuberculist Genomic Region

DVU0308 Membrane protein, putative

Details for DVU0308 - Membrane protein, putative

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0308

Tuberculist Genomic Region

DVU0324 Uncharacterized protein

Details for DVU0324 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0324

Tuberculist Genomic Region

DVU0363 Para-aminobenzoate synthase, component I

Details for DVU0363 - Para-aminobenzoate synthase, component I

GO Terms: GO:0009058

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0363

Tuberculist Genomic Region

DVU0346 Membrane protein, putative

Details for DVU0346 - Membrane protein, putative

GO Terms: GO:0016020, GO:0000271

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0346

Tuberculist Genomic Region

DVU1037 Mercuric reductase, putative

Details for DVU1037 - Mercuric reductase, putative

GO Terms: GO:0050661, GO:0045454, GO:0050787, GO:0050660, GO:0016152, GO:0045340, GO:0016668

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1037

Tuberculist Genomic Region

DVU0736 Phosphoribosylglycinamide formyltransferase

Details for DVU0736 - Phosphoribosylglycinamide formyltransferase

GO Terms: GO:0006189, GO:0008168, GO:0004644

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0736

Tuberculist Genomic Region

DVU1683 Uncharacterized protein

Details for DVU1683 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1683

Tuberculist Genomic Region

DVU1173 Integral membrane protein MviN

Details for DVU1173 - Integral membrane protein MviN

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1173

Tuberculist Genomic Region

DVU2358 Uncharacterized protein

Details for DVU2358 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2358

Tuberculist Genomic Region

DVU1604 Uncharacterized protein

Details for DVU1604 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1604

Tuberculist Genomic Region

DVU2730 Tail fiber protein, putative

Details for DVU2730 - Tail fiber protein, putative

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2730

Tuberculist Genomic Region

DVU1662 Permease, putative

Details for DVU1662 - Permease, putative

GO Terms: GO:0016021

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1662

Tuberculist Genomic Region

DVU2743 High-affinity branched-chain amino acid ABC ransporter, permease protein

Details for DVU2743 - High-affinity branched-chain amino acid ABC ransporter, permease protein

GO Terms: GO:0016021, GO:0005886, GO:0005215

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2743

Tuberculist Genomic Region

DVU1744 DNA-binding protein

Details for DVU1744 - DNA-binding protein

GO Terms: GO:0043565

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1744

Tuberculist Genomic Region

DVU2761 Uncharacterized protein

Details for DVU2761 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2761

Tuberculist Genomic Region

DVU2618 Uncharacterized protein

Details for DVU2618 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2618

Tuberculist Genomic Region

DVU2871 Minor capsid protein C

Details for DVU2871 - Minor capsid protein C

GO Terms: GO:0008233

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2871

Tuberculist Genomic Region

DVU2787 Conserved domain protein

Details for DVU2787 - Conserved domain protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2787

Tuberculist Genomic Region

DVU3043 Uncharacterized protein

Details for DVU3043 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU3043

Tuberculist Genomic Region

DVU2823 TRAP transporter, DctMQ subunit

Details for DVU2823 - TRAP transporter, DctMQ subunit

GO Terms: GO:0016021

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2823

Tuberculist Genomic Region

DVU3081 Membrane protein, putative

Details for DVU3081 - Membrane protein, putative

GO Terms: GO:0016021

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU3081

Tuberculist Genomic Region

DVU3040 Uncharacterized protein

Details for DVU3040 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU3040

Tuberculist Genomic Region

DVU3108 Na+/H+ antiporter NhaC

Details for DVU3108 - Na+/H+ antiporter NhaC

GO Terms: GO:0015297, GO:0016021

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU3108

Tuberculist Genomic Region

Displaying 1 - 29 of 29

Motifs

Motif 1: e-value: 570 e-value: 13

Module Plots

Regulation

Regulator Interaction Influence Weight Other Influences

DVU1518

Transcriptional regulator cI, truncation
 down-regulates -0.19

DVU1518

DVU2423

Transcriptional regulator, putative
 up-regulates 0.19

DVU2423

DVU2557

Bifunctional ligase/repressor BirA
up-regulates 0.14

DVU2557

DVU2953

Transcriptional regulator, GntR family
 up-regulates 0.12

DVU2953

DVU3023

Sigma-54 dependent DNA-binding response regulator
 up-regulates 0.17

DVU3023

DVUA0100

Sigma-54 dependent transcriptional regulator
 down-regulates -0.20

DVUA0100

GO Enrichment

Category: MF
Category GO ID GO Term Annotated Expected Significant p-value
MF GO:0015297 antiporter activity 4 0.02 1 0.0190
MF GO:0050661 NADP binding 5 0.02 1 0.0230
MF GO:0015291 secondary active transmembrane transport... 8 0.04 1 0.0370

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