Desulfovibrio vulgaris Hildenborough Module 207 Residual: 0.37

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Residual: 0.37 Score: -60.1402 version: dvh_cmonkey_11_Mar_02
DVU2288 Hydrogenase, CooL subunit, putative

Details for DVU2288 - Hydrogenase, CooL subunit, putative

GO Terms: GO:0051536, GO:0055114

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2288

Tuberculist Genomic Region

DVU3029 Phosphate acetyltransferase

Details for DVU3029 - Phosphate acetyltransferase

GO Terms: GO:0006085, GO:0005737, GO:0008959

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU3029

Tuberculist Genomic Region

DVU2290 Hydrogenase, CooU subunit, putative

Details for DVU2290 - Hydrogenase, CooU subunit, putative

GO Terms: GO:0008137

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2290

Tuberculist Genomic Region

DVU3030 Acetate kinase

Details for DVU3030 - Acetate kinase

GO Terms: GO:0005524, GO:0008776, GO:0006085, GO:0005737, GO:0000287, GO:0006082

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU3030

Tuberculist Genomic Region

DVU2292 Probable hydrogenase nickel incorporation protein HypA 2

Details for DVU2292 - Probable hydrogenase nickel incorporation protein HypA 2

GO Terms: GO:0006464, GO:0016151

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2292

Tuberculist Genomic Region

DVU3031 Uncharacterized protein

Details for DVU3031 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU3031

Tuberculist Genomic Region

DVU2293 Iron-sulfur protein CooF

Details for DVU2293 - Iron-sulfur protein CooF

GO Terms: GO:0051536

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2293

Tuberculist Genomic Region

DVU3032 Uncharacterized protein

Details for DVU3032 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU3032

Tuberculist Genomic Region

DVU3024 Uncharacterized protein

Details for DVU3024 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU3024

Tuberculist Genomic Region

DVU2286 Hydrogenase, CooM subunit, putative

Details for DVU2286 - Hydrogenase, CooM subunit, putative

GO Terms: GO:0016021

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2286

Tuberculist Genomic Region

DVU3025 Pyruvate synthase

Details for DVU3025 - Pyruvate synthase

GO Terms: GO:0051539, GO:0022900, GO:0005506, GO:0019164, GO:0030976

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU3025

Tuberculist Genomic Region

DVU2289 Hydrogenase, CooX subunit, putative

Details for DVU2289 - Hydrogenase, CooX subunit, putative

GO Terms: GO:0051536

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2289

Tuberculist Genomic Region

DVU3027 Glycolate oxidase, subunit GlcD

Details for DVU3027 - Glycolate oxidase, subunit GlcD

GO Terms: GO:0008762, GO:0050660

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU3027

Tuberculist Genomic Region

DVU2291 Carbon monoxide-induced hydrogenase CooH, putative

Details for DVU2291 - Carbon monoxide-induced hydrogenase CooH, putative

GO Terms: GO:0051287, GO:0016651, GO:0048038

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2291

Tuberculist Genomic Region

Motif 1:
Regulator Interaction Influence Weight Other Influences
Transcriptional regulator cII, putative
down-regulates -0.19
DNA-binding protein
down-regulates -0.11
Sigma-54 dependent transcriptional regulator
down-regulates -0.13
Transcriptional regulator, GntR family
down-regulates -0.12
Transcriptional regulator, GntR family
down-regulates -0.20
Transcriptional regulatory protein zraR
down-regulates -0.10
Category: BP
Category GO ID GO Term Annotated Expected Significant p-value
BP GO:0006790 sulfur compound metabolic process 4 0.02 1 0.0216
BP GO:0044272 sulfur compound biosynthetic process 4 0.02 1 0.0216
BP GO:0006464 cellular protein modification process 7 0.04 1 0.0376
BP GO:0036211 protein modification process 7 0.04 1 0.0376
BP GO:0009108 coenzyme biosynthetic process 9 0.05 1 0.0483
BP GO:0043412 macromolecule modification 9 0.05 1 0.0483
Category: MF
Category GO ID GO Term Annotated Expected Significant p-value
MF GO:0051536 iron-sulfur cluster binding 110 0.69 4 0.0028
MF GO:0051540 metal cluster binding 110 0.69 4 0.0028
MF GO:0016651 oxidoreductase activity, acting on NAD(P... 3 0.02 1 0.0186
MF GO:0016655 oxidoreductase activity, acting on NAD(P... 3 0.02 1 0.0186
MF GO:0008762 UDP-N-acetylmuramate dehydrogenase activ... 5 0.03 1 0.0309
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