Desulfovibrio vulgaris Hildenborough Module 232 Residual: 0.49

Residual: 0.49 Score: -46.4501 version: dvh_cmonkey_11_Mar_02
DVU0302 Chemotaxis protein CheX, putative

Details for DVU0302 - Chemotaxis protein CheX, putative

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0302

Tuberculist Genomic Region

DVU0838 UPF0109 protein DVU_0838

Details for DVU0838 - UPF0109 protein DVU_0838

GO Terms: GO:0003723

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0838

Tuberculist Genomic Region

DVU1190 Sensory box/GGDEF domain/EAL domain protein

Details for DVU1190 - Sensory box/GGDEF domain/EAL domain protein

GO Terms: GO:0000155

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1190

Tuberculist Genomic Region

DVU0936 Uncharacterized protein

Details for DVU0936 - Uncharacterized protein

GO Terms: GO:0003677

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0936

Tuberculist Genomic Region

DVU1372 Membrane protein, putative

Details for DVU1372 - Membrane protein, putative

GO Terms: GO:0016020

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1372

Tuberculist Genomic Region

DVU0942 Transcriptional regulator, Fur family

Details for DVU0942 - Transcriptional regulator, Fur family

GO Terms: GO:0003677, GO:0003700

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0942

Tuberculist Genomic Region

DVU1373 Cell division initiation protein DivIVA

Details for DVU1373 - Cell division initiation protein DivIVA

GO Terms: GO:0007049, GO:0051301, GO:0005737

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1373

Tuberculist Genomic Region

DVU0986 Uncharacterized protein

Details for DVU0986 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0986

Tuberculist Genomic Region

DVU1374 UPF0235 protein DVU_1374

Details for DVU1374 - UPF0235 protein DVU_1374

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1374

Tuberculist Genomic Region

DVU0987 Heavy metal-binding domain protein

Details for DVU0987 - Heavy metal-binding domain protein

GO Terms: GO:0046872, GO:0030001

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0987

Tuberculist Genomic Region

DVU1375 Uncharacterized protein

Details for DVU1375 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1375

Tuberculist Genomic Region

DVU1093 HAD-superfamily hydrolase, subfamily IA, variant 3

Details for DVU1093 - HAD-superfamily hydrolase, subfamily IA, variant 3

GO Terms: GO:0016787

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1093

Tuberculist Genomic Region

DVU1377 Acetolactate synthase, small subunit

Details for DVU1377 - Acetolactate synthase, small subunit

GO Terms: GO:0003984, GO:0016597, GO:0009082

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1377

Tuberculist Genomic Region

DVU1367 Sec-independent protein translocase protein TatA

Details for DVU1367 - Sec-independent protein translocase protein TatA

GO Terms: GO:0033281, GO:0005887, GO:0009306, GO:0008320, GO:0043953

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1367

Tuberculist Genomic Region

DVU1378 Ketol-acid reductoisomerase

Details for DVU1378 - Ketol-acid reductoisomerase

GO Terms: GO:0050662, GO:0009097, GO:0004455, GO:0009099

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1378

Tuberculist Genomic Region

DVU1392 NLP/P60 family protein

Details for DVU1392 - NLP/P60 family protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1392

Tuberculist Genomic Region

DVU2532 Transcriptional regulator, MerR family

Details for DVU2532 - Transcriptional regulator, MerR family

GO Terms: GO:0003677, GO:0006355

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2532

Tuberculist Genomic Region

DVU1612 ACT domain protein

Details for DVU1612 - ACT domain protein

GO Terms: GO:0016597, GO:0008152

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1612

Tuberculist Genomic Region

DVU2965 Uncharacterized protein

Details for DVU2965 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2965

Tuberculist Genomic Region

DVU1834 Pyruvate carboxylase

Details for DVU1834 - Pyruvate carboxylase

GO Terms: GO:0005524, GO:0004075, GO:0006094, GO:0046872, GO:0004736

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1834

Tuberculist Genomic Region

DVU0837 Ribosome maturation factor RimM

Details for DVU0837 - Ribosome maturation factor RimM

GO Terms: GO:0006364, GO:0042274, GO:0005840, GO:0043022

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0837

Tuberculist Genomic Region

DVU3187 DNA-binding protein HU

Details for DVU3187 - DNA-binding protein HU

GO Terms: GO:0003677

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU3187

Tuberculist Genomic Region

Motif 1: e-value: 0.04 e-value: 3.5
Regulator Interaction Influence Weight Other Influences
Sigma-54 dependent transcriptional regulator/response regulator
up-regulates 0.17
Psp operon transcriptional activator
down-regulates -0.15
Transcriptional regulator, putative
up-regulates 0.17
Transcriptional regulator, Crp/Fnr family
down-regulates -0.11
Category: BP
Category GO ID GO Term Annotated Expected Significant p-value
BP GO:0006396 RNA processing 5 0.03 1 0.0270
BP GO:0034470 ncRNA processing 5 0.03 1 0.0270
BP GO:0034660 ncRNA metabolic process 5 0.03 1 0.0270
BP GO:0007049 cell cycle 9 0.05 1 0.0483
Category: CC
Category GO ID GO Term Annotated Expected Significant p-value
CC GO:0033281 TAT protein transport complex 4 0.02 1 0.0200
CC GO:0043234 protein complex 10 0.05 1 0.0500
Category: MF
Category GO ID GO Term Annotated Expected Significant p-value
MF GO:0003984 acetolactate synthase activity 4 0.04 1 0.0370
MF GO:0016597 amino acid binding 4 0.04 1 0.0370
MF GO:0016744 transferase activity, transferring aldeh... 4 0.04 1 0.0370
MF GO:0003676 nucleic acid binding 222 2.08 5 0.0420
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