Desulfovibrio vulgaris Hildenborough Module 243 Residual: 0.32 | Syntrophy Portal

×

Error message

Unable to create CTools CSS cache directory. Check the permissions on your files directory.
Unable to create CTools CSS cache directory. Check the permissions on your files directory.

Summary

Residual: 0.32 Score: -99.9406 version: dvh_cmonkey_11_Mar_02

Members

DVU1707 Uncharacterized protein Details for DVU1707 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU1707 Tuberculist Genomic Region	DVU1996 Quaternary ammonium compound-resistance protein QacC, putative Details for DVU1996 - Quaternary ammonium compound-resistance protein QacC, putative GO Terms: GO:0016021, GO:0005886, GO:0006810 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU1996 Tuberculist Genomic Region
DVU1059 Aminotransferase, putative Details for DVU1059 - Aminotransferase, putative GO Terms: GO:0009058, GO:0030170, GO:0008483 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU1059 Tuberculist Genomic Region	DVU2122 Type II/IV secretion system protein Details for DVU2122 - Type II/IV secretion system protein GO Terms: GO:0005524, GO:0006810 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2122 Tuberculist Genomic Region
DVU1063 Transcriptional regulatory protein Details for DVU1063 - Transcriptional regulatory protein GO Terms: GO:0005524, GO:0000160, GO:0006355, GO:0043565, GO:0006351 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU1063 Tuberculist Genomic Region	DVU2186 Uncharacterized protein Details for DVU2186 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2186 Tuberculist Genomic Region
DVU1700 Metallo-beta-lactamase family protein Details for DVU1700 - Metallo-beta-lactamase family protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU1700 Tuberculist Genomic Region	DVU2207 Uncharacterized protein Details for DVU2207 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2207 Tuberculist Genomic Region
DVU1733 Uncharacterized protein Details for DVU1733 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU1733 Tuberculist Genomic Region	DVU2262 Uncharacterized protein Details for DVU2262 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2262 Tuberculist Genomic Region
DVU1747 ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein Details for DVU1747 - ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain protein GO Terms: GO:0016301 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU1747 Tuberculist Genomic Region

Motifs

Motif 1:

e-value: 0.17 Motif 2:

e-value: 2.7

Module Median Expression Profiles

Module Plots

Regulation

Regulator	Interaction	Influence Weight	Other Influences
DVU1340 Transcriptional regulator, Fur family	down-regulates	-0.14	DVU1340
DVU1745 DNA-binding protein	up-regulates	0.19	DVU1745
DVU2832 Transcriptional regulator cII, putative	up-regulates	0.15	DVU2832
DVU3023 Sigma-54 dependent DNA-binding response regulator	down-regulates	-0.12	DVU3023
[field_regulator_taxonomy_regulat_1]	up-regulates	31.06	Oxygen
[field_regulator_taxonomy_regulat_1]	up-regulates	0.10	Salt-Stress Evolved Control

GO Enrichment

Category:
Annotated

Essentiality

Comments

Log in to post comments