Desulfovibrio vulgaris Hildenborough Module 273 Residual: 0.47

×

Error message

  • Unable to create CTools CSS cache directory. Check the permissions on your files directory.
  • Unable to create CTools CSS cache directory. Check the permissions on your files directory.

Summary

Residual: 0.47 Score: -56.8014 version: dvh_cmonkey_11_Mar_02

Members

DVU2024 Uncharacterized protein

Details for DVU2024 - Uncharacterized protein

GO Terms: GO:0005524

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2024

Tuberculist Genomic Region

DVU2023 Uncharacterized protein

Details for DVU2023 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2023

Tuberculist Genomic Region

DVU2025 Uncharacterized protein

Details for DVU2025 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2025

Tuberculist Genomic Region

DVU2027 Uncharacterized protein

Details for DVU2027 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2027

Tuberculist Genomic Region

DVU2026 Uncharacterized protein

Details for DVU2026 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2026

Tuberculist Genomic Region

DVU2028 Conserved domain protein

Details for DVU2028 - Conserved domain protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2028

Tuberculist Genomic Region

DVU2031 Uncharacterized protein

Details for DVU2031 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2031

Tuberculist Genomic Region

DVU2034 Uncharacterized protein

Details for DVU2034 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2034

Tuberculist Genomic Region

DVU2035 Plasmid stabilization system family protein

Details for DVU2035 - Plasmid stabilization system family protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2035

Tuberculist Genomic Region

DVU2038 Uncharacterized protein

Details for DVU2038 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2038

Tuberculist Genomic Region

DVU2037 CobS protein, putative

Details for DVU2037 - CobS protein, putative

GO Terms: GO:0005524, GO:0016887

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2037

Tuberculist Genomic Region

DVU2039 Uncharacterized protein

Details for DVU2039 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2039

Tuberculist Genomic Region

DVU2046 Uncharacterized protein

Details for DVU2046 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2046

Tuberculist Genomic Region

DVU2040 Uncharacterized protein

Details for DVU2040 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2040

Tuberculist Genomic Region

DVU2009 Conserved domain protein

Details for DVU2009 - Conserved domain protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2009

Tuberculist Genomic Region

DVU2041 Uncharacterized protein

Details for DVU2041 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2041

Tuberculist Genomic Region

DVU2012 Uncharacterized protein

Details for DVU2012 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2012

Tuberculist Genomic Region

DVU2042 Fic family protein

Details for DVU2042 - Fic family protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2042

Tuberculist Genomic Region

DVU2015 Uncharacterized protein

Details for DVU2015 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2015

Tuberculist Genomic Region

DVU2043 Uncharacterized protein

Details for DVU2043 - Uncharacterized protein

GO Terms: GO:0009236

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2043

Tuberculist Genomic Region

DVU2016 GGDEF domain protein

Details for DVU2016 - GGDEF domain protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2016

Tuberculist Genomic Region

DVU2045 Uncharacterized protein

Details for DVU2045 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2045

Tuberculist Genomic Region

DVU2021 Uncharacterized protein

Details for DVU2021 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2021

Tuberculist Genomic Region

DVU2047 Uncharacterized protein

Details for DVU2047 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2047

Tuberculist Genomic Region

Displaying 1 - 24 of 24

Motifs

Motif 1: e-value: 0.00016 e-value: 0.00011

Module Plots

Regulation

Regulator Interaction Influence Weight Other Influences

DVU2086

Transcriptional regulator, GntR family
 up-regulates 0.20

DVU2086

DVU2097

Transcriptional regulator, putative
 up-regulates 0.19

DVU2097

DVU2111

Transcriptional regulator, LysR family
 down-regulates -0.20

DVU2111

DVU2644

Transcriptional regulator, GntR family
 up-regulates 0.22

DVU2644

DVU3305

Sigma-54 dependent transcriptional regulator/response regulator
 up-regulates 0.10

DVU3305
[field_regulator_taxonomy_regulat_1] up-regulates 0.12

Nitrate

GO Enrichment

Category: BP
Category GO ID GO Term Annotated Expected Significant p-value
BP GO:0006766 vitamin metabolic process 13 0.04 1 0.0350
BP GO:0006767 water-soluble vitamin metabolic process 13 0.04 1 0.0350
BP GO:0009110 vitamin biosynthetic process 13 0.04 1 0.0350
BP GO:0009235 cobalamin metabolic process 13 0.04 1 0.0350
BP GO:0009236 cobalamin biosynthetic process 13 0.04 1 0.0350
BP GO:0042364 water-soluble vitamin biosynthetic proce... 13 0.04 1 0.0350
BP GO:0033013 tetrapyrrole metabolic process 14 0.04 1 0.0380
BP GO:0033014 tetrapyrrole biosynthetic process 14 0.04 1 0.0380

Comments

Log in to post comments