Desulfovibrio vulgaris Hildenborough Module 303 Residual: 0.43

Residual: 0.43 Score: -50.8122 version: dvh_cmonkey_11_Mar_02
DVU0713 Branched-chain amino acid ABC transporter, permease protein

Details for DVU0713 - Branched-chain amino acid ABC transporter, permease protein

GO Terms: GO:0016021, GO:0005886, GO:0005215

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0713

Tuberculist Genomic Region

DVU1682 GAF domain protein

Details for DVU1682 - GAF domain protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1682

Tuberculist Genomic Region

DVU0656 UPF0434 protein DVU_0656

Details for DVU0656 - UPF0434 protein DVU_0656

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0656

Tuberculist Genomic Region

DVU2323 Uncharacterized protein

Details for DVU2323 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2323

Tuberculist Genomic Region

DVU0657 Heat shock protein, Hsp20 family

Details for DVU0657 - Heat shock protein, Hsp20 family

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0657

Tuberculist Genomic Region

DVU2608 Chemotaxis protein MotA

Details for DVU2608 - Chemotaxis protein MotA

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2608

Tuberculist Genomic Region

DVU0940 GGDEF domain protein

Details for DVU0940 - GGDEF domain protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0940

Tuberculist Genomic Region

DVU2799 Transcriptional regulator, MarR family

Details for DVU2799 - Transcriptional regulator, MarR family

GO Terms: GO:0003677, GO:0005622, GO:0003700, GO:0006351

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2799

Tuberculist Genomic Region

DVU1376 Acetolactate synthase

Details for DVU1376 - Acetolactate synthase

GO Terms: GO:0003984, GO:0050660, GO:0009097, GO:0000287, GO:0030976, GO:0009099

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1376

Tuberculist Genomic Region

DVU2800 Heavy metal translocating P-type ATPase

Details for DVU2800 - Heavy metal translocating P-type ATPase

GO Terms: GO:0005524, GO:0019829, GO:0016021, GO:0046872

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2800

Tuberculist Genomic Region

DVU1462 Cytochrome c assembly protein, putative

Details for DVU1462 - Cytochrome c assembly protein, putative

GO Terms: GO:0017004, GO:0020037

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1462

Tuberculist Genomic Region

DVU2801 Uncharacterized protein

Details for DVU2801 - Uncharacterized protein

GO Terms: GO:0004871

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2801

Tuberculist Genomic Region

DVU1464 Heptosyltransferase family protein

Details for DVU1464 - Heptosyltransferase family protein

GO Terms: GO:0016757

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1464

Tuberculist Genomic Region

DVU3085 Uncharacterized protein

Details for DVU3085 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU3085

Tuberculist Genomic Region

DVU1650 Uncharacterized protein

Details for DVU1650 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1650

Tuberculist Genomic Region

DVU3261 Fumarate reductase, cytochrome b subunit

Details for DVU3261 - Fumarate reductase, cytochrome b subunit

GO Terms: GO:0046872, GO:0016627, GO:0006099

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU3261

Tuberculist Genomic Region

DVU1651 Uncharacterized protein

Details for DVU1651 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1651

Tuberculist Genomic Region

DVU3356 NAD-dependent epimerase/dehydratase family protein

Details for DVU3356 - NAD-dependent epimerase/dehydratase family protein

GO Terms: GO:0005975, GO:0050662, GO:0016857

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU3356

Tuberculist Genomic Region

Motif 1: e-value: 0.00013 e-value: 3.6
Regulator Interaction Influence Weight Other Influences
Sigma-54 dependent transcriptional regulator/response regulator
up-regulates 0.16
Transcriptional regulatory protein
down-regulates -0.12
Uncharacterized protein
down-regulates -0.10
Uncharacterized protein
up-regulates 0.17
Sigma-54 dependent DNA-binding response regulator
up-regulates 0.13
Uncharacterized protein
up-regulates 0.16
Category: BP
Category GO ID GO Term Annotated Expected Significant p-value
BP GO:0006461 protein complex assembly 6 0.03 1 0.0320
BP GO:0017004 cytochrome complex assembly 6 0.03 1 0.0320
BP GO:0034622 cellular macromolecular complex assembly 6 0.03 1 0.0320
BP GO:0043623 cellular protein complex assembly 6 0.03 1 0.0320
BP GO:0043933 macromolecular complex subunit organizat... 6 0.03 1 0.0320
BP GO:0065003 macromolecular complex assembly 6 0.03 1 0.0320
BP GO:0070271 protein complex biogenesis 6 0.03 1 0.0320
BP GO:0071822 protein complex subunit organization 6 0.03 1 0.0320
Category: MF
Category GO ID GO Term Annotated Expected Significant p-value
MF GO:0003984 acetolactate synthase activity 4 0.02 1 0.0190
MF GO:0016744 transferase activity, transferring aldeh... 4 0.02 1 0.0190
Log in to post comments