Desulfovibrio vulgaris Hildenborough Module 324 Residual: 0.41 | Syntrophy Portal

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Summary

Residual: 0.41 Score: -60.6164 version: dvh_cmonkey_11_Mar_02

Members

DVU0484 ABC transporter, ATP-binding protein Details for DVU0484 - ABC transporter, ATP-binding protein GO Terms: GO:0005524, GO:0016887 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU0484 Tuberculist Genomic Region	DVU2624 Uncharacterized protein Details for DVU2624 - Uncharacterized protein GO Terms: GO:0006323 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2624 Tuberculist Genomic Region
DVU0539 Sigma-54 dependent DNA-binding response regulator Details for DVU0539 - Sigma-54 dependent DNA-binding response regulator GO Terms: GO:0005524, GO:0000160, GO:0006355, GO:0043565, GO:0006351 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU0539 Tuberculist Genomic Region	DVU2702 Uncharacterized protein Details for DVU2702 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2702 Tuberculist Genomic Region
DVU1233 Bifunctional uridylyltransferase/uridylyl-removing enzyme Details for DVU1233 - Bifunctional uridylyltransferase/uridylyl-removing enzyme GO Terms: GO:0008773, GO:0016597, GO:0006807, GO:0008081, GO:0006808 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU1233 Tuberculist Genomic Region	DVU2703 Uncharacterized protein Details for DVU2703 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2703 Tuberculist Genomic Region
DVU1562 HAMP domain protein Details for DVU1562 - HAMP domain protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU1562 Tuberculist Genomic Region	DVU2721 Phage tail tape measure protein, TP901 family, putative Details for DVU2721 - Phage tail tape measure protein, TP901 family, putative GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2721 Tuberculist Genomic Region
DVU1563 Sensory box histidine kinase/response regulator Details for DVU1563 - Sensory box histidine kinase/response regulator GO Terms: GO:0016020, GO:0000155 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU1563 Tuberculist Genomic Region	DVU2722 Uncharacterized protein Details for DVU2722 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2722 Tuberculist Genomic Region
DVU2598 Uncharacterized protein Details for DVU2598 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2598 Tuberculist Genomic Region	DVU2723 Tail protein, putative Details for DVU2723 - Tail protein, putative GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2723 Tuberculist Genomic Region
DVU2600 Uncharacterized protein Details for DVU2600 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2600 Tuberculist Genomic Region	DVU2729 Tail protein, putative Details for DVU2729 - Tail protein, putative GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2729 Tuberculist Genomic Region
DVU2623 Uncharacterized protein Details for DVU2623 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2623 Tuberculist Genomic Region

Motifs

Motif 1:

e-value: 0.32 Motif 2:

e-value: 88

Module Median Expression Profiles

Module Plots

Regulation

Regulator	Interaction	Influence Weight	Other Influences
DVU1517 Transcriptional regulator cII, putative	up-regulates	0.11	DVU1517
DVU1754 Uncharacterized protein	up-regulates	0.15	DVU1754
DVU2114 Sigma-54 dependent transcriptional regulator/response regulator	down-regulates	-0.31	DVU2114
DVU3142 Sigma-54 dependent transcriptional regulator	up-regulates	0.23	DVU3142

GO Enrichment

Category: BP
Category	GO ID	GO Term	Annotated	Expected	Significant	p-value
BP	GO:0006259	DNA metabolic process	17	0.05	1	0.0461

Category: MF
Category	GO ID	GO Term	Annotated	Expected	Significant	p-value
MF	GO:0008773	[protein-PII] uridylyltransferase activi...	3	0.01	1	0.0070
MF	GO:0070569	uridylyltransferase activity	3	0.01	1	0.0070
MF	GO:0016779	nucleotidyltransferase activity	6	0.01	1	0.0140

Essentiality

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