Methanococcus maripaludis S2 Module 21 Residual: 0.45

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Summary

Residual: 0.45 Score: -10.1806 version: mmp_cmonkey_11_Oct_11

Members

MMP0228 N2;N2-dimethylguanosine tRNA methyltransferase (NCBI)

Details for MMP0228 - N2;N2-dimethylguanosine tRNA methyltransferase (NCBI)

GO Terms: GO:0008033, GO:0003723, GO:0004809

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0228

Tuberculist Genomic Region

MMP1657 conserved hypothetical protein (NCBI)

Details for MMP1657 - conserved hypothetical protein (NCBI)

GO Terms: GO:0032259, GO:0006118, GO:0003676, GO:0046872, GO:0008168, GO:0009055

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1657

Tuberculist Genomic Region

MMP0270 conserved archaeal protein (NCBI)

Details for MMP0270 - conserved archaeal protein (NCBI)

GO Terms: GO:0051536

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0270

Tuberculist Genomic Region

MMP1681 Phosphoadenosine phosphosulfate reductase (NCBI)

Details for MMP1681 - Phosphoadenosine phosphosulfate reductase (NCBI)

GO Terms: GO:0008152, GO:0016740

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1681

Tuberculist Genomic Region

MMP0271 ATP binding putative nickel incorporation protein (NCBI)

Details for MMP0271 - ATP binding putative nickel incorporation protein (NCBI)

GO Terms: GO:0000166, GO:0005524, GO:0016151, GO:0017111

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0271

Tuberculist Genomic Region

MMP1682 single stranded DNA-specific exonuclease (NCBI)

Details for MMP1682 - single stranded DNA-specific exonuclease (NCBI)

GO Terms: GO:0003676, GO:0016787, GO:0030145

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1682

Tuberculist Genomic Region

MMP0272 ABC transporter ATPase subunit (NCBI)

Details for MMP0272 - ABC transporter ATPase subunit (NCBI)

GO Terms: GO:0005524, GO:0016887

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0272

Tuberculist Genomic Region

MMP1704 conserved hypothetical archeal protein (NCBI)

Details for MMP1704 - conserved hypothetical archeal protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1704

Tuberculist Genomic Region

MMP0273 (2R)-phospho-3-sulfolactate synthase (NCBI)

Details for MMP0273 - (2R)-phospho-3-sulfolactate synthase (NCBI)

GO Terms: GO:0019295, GO:0043817

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0273

Tuberculist Genomic Region

MMP0954 hypothetical protein (NCBI)

Details for MMP0954 - hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0954

Tuberculist Genomic Region

MMP0618 conserved hypothetical protein (NCBI)

Details for MMP0618 - conserved hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0618

Tuberculist Genomic Region

MMP1021 conserved hypothetical protein (NCBI)

Details for MMP1021 - conserved hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1021

Tuberculist Genomic Region

MMP0619 Putative DNA binding protein (NCBI)

Details for MMP0619 - Putative DNA binding protein (NCBI)

GO Terms: GO:0006352, GO:0006355, GO:0003700, GO:0016987

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0619

Tuberculist Genomic Region

MMP1026 Arginyl-tRNA synthetase (NCBI)

Details for MMP1026 - Arginyl-tRNA synthetase (NCBI)

GO Terms: GO:0006420, GO:0005737, GO:0005524, GO:0004814

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1026

Tuberculist Genomic Region

MMP0620 methyl coenzyme M reductase, component A2 (NCBI)

Details for MMP0620 - methyl coenzyme M reductase, component A2 (NCBI)

GO Terms: GO:0005524, GO:0016887

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0620

Tuberculist Genomic Region

MMP1259 NAD(P)H: rubredoxin oxidoreductase (NPOR) (NCBI)

Details for MMP1259 - NAD(P)H: rubredoxin oxidoreductase (NPOR) (NCBI)

GO Terms: GO:0045454, GO:0006118, GO:0005737, GO:0016491

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1259

Tuberculist Genomic Region

MMP0698 conserved hypothetical protein (NCBI)

Details for MMP0698 - conserved hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0698

Tuberculist Genomic Region

MMP1318 Lysyl-tRNA synthetase (NCBI)

Details for MMP1318 - Lysyl-tRNA synthetase (NCBI)

GO Terms: GO:0006430, GO:0017101, GO:0005737, GO:0004824, GO:0005524

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1318

Tuberculist Genomic Region

MMP0904 AIR synthase related protein:Selenide water dikinase (NCBI)

Details for MMP0904 - AIR synthase related protein:Selenide water dikinase (NCBI)

GO Terms: GO:0005524, GO:0004756

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0904

Tuberculist Genomic Region

MMP1358 ferredoxin (NCBI)

Details for MMP1358 - ferredoxin (NCBI)

GO Terms: GO:0006118, GO:0051536, GO:0009055

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1358

Tuberculist Genomic Region

MMP1022 conserved hypothetical protein (NCBI)

Details for MMP1022 - conserved hypothetical protein (NCBI)

GO Terms: GO:0016021, GO:0008158

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1022

Tuberculist Genomic Region

MMP1512 Alanine racemase (NCBI)

Details for MMP1512 - Alanine racemase (NCBI)

GO Terms: GO:0006522, GO:0008784

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1512

Tuberculist Genomic Region

MMP1023 Transcriptional regulator, TetR Family Member (NCBI)

Details for MMP1023 - Transcriptional regulator, TetR Family Member (NCBI)

GO Terms: GO:0006355, GO:0016481, GO:0003700, GO:0016566

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1023

Tuberculist Genomic Region

MMP1513 alanine dehydrogenase (NCBI)

Details for MMP1513 - alanine dehydrogenase (NCBI)

GO Terms: GO:0006118, GO:0000286

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1513

Tuberculist Genomic Region

MMP1186 Eukaryotic thiol (cysteine) protease, active site:ATP/GTP-binding site motif A (P-loop):Sigma-54 factor interaction domain:Pu... (NCBI)

Details for MMP1186 - Eukaryotic thiol (cysteine) protease, active site:ATP/GTP-binding site motif A (P-loop):Sigma-54 factor interaction domain:Pu... (NCBI)

GO Terms: GO:0015995, GO:0006355, GO:0006508, GO:0030163, GO:0015979, GO:0005622, GO:0005524, GO:0016851, GO:0008134, GO:0004176, GO:0008846

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1186

Tuberculist Genomic Region

MMP1527 Aminotransferase (subgroup I) (NCBI)

Details for MMP1527 - Aminotransferase (subgroup I) (NCBI)

GO Terms: GO:0009058, GO:0016769, GO:0030170

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1527

Tuberculist Genomic Region

MMP1200 Diaminopimelate decarboxylase (NCBI)

Details for MMP1200 - Diaminopimelate decarboxylase (NCBI)

GO Terms: GO:0009089, GO:0008836

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1200

Tuberculist Genomic Region

MMP1584 SAM (and some other nucleotide) binding motif:Spermine synthase (NCBI)

Details for MMP1584 - SAM (and some other nucleotide) binding motif:Spermine synthase (NCBI)

GO Terms: GO:0004766

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1584

Tuberculist Genomic Region

MMP1317 conserved hypothetical protein (NCBI)

Details for MMP1317 - conserved hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1317

Tuberculist Genomic Region

MMP1706 conserved hypothetical protein (NCBI)

Details for MMP1706 - conserved hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1706

Tuberculist Genomic Region

MMP1583 S-adenosylmethionine decarboxylase related (NCBI)

Details for MMP1583 - S-adenosylmethionine decarboxylase related (NCBI)

GO Terms: GO:0004014

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1583

Tuberculist Genomic Region

MMP1707 translation initiation factor aIF-2, subunit alpha (NCBI)

Details for MMP1707 - translation initiation factor aIF-2, subunit alpha (NCBI)

GO Terms: GO:0006412, GO:0005850, GO:0003723, GO:0003743

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1707

Tuberculist Genomic Region

MMP1611 conserved hypothetical protein (NCBI)

Details for MMP1611 - conserved hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1611

Tuberculist Genomic Region

Displaying 1 - 33 of 33

Motifs

Motif 1: e-value: 3800 e-value: 3500

Module Plots

Regulation

Regulator Interaction Influence Weight Other Influences

H2

 up-regulates 0.67

H2

MMP0036

Transcription factor E (NCBI)

H2

 up-regulates 0.27

MMP0036

H2

GO Enrichment

Category: BP
Category GO ID GO Term Annotated Expected Significant p-value
BP GO:0044272 sulfur compound biosynthetic process 7 0.18 2 0.0109
BP GO:0006790 sulfur compound metabolic process 8 0.21 2 0.0143

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