Methanococcus maripaludis S2 Module 22 Residual: 0.40

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Summary

Residual: 0.40 Score: -14.8041 version: mmp_cmonkey_11_Oct_11

Members

MMP0085 conserved hypothetical protein (NCBI)

Details for MMP0085 - conserved hypothetical protein (NCBI)

GO Terms: GO:0006412, GO:0005634

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0085

Tuberculist Genomic Region

MMP1452 conserved hypothetical protein (NCBI)

Details for MMP1452 - conserved hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1452

Tuberculist Genomic Region

MMP0281 hypothetical nucleotide binding protein (NCBI)

Details for MMP0281 - hypothetical nucleotide binding protein (NCBI)

GO Terms: GO:0003723

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0281

Tuberculist Genomic Region

MMP1453 conserved hypothetical protein (NCBI)

Details for MMP1453 - conserved hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1453

Tuberculist Genomic Region

MMP0453 Neutral zinc metallopeptidases, zinc-binding region:CBS domain (NCBI)

Details for MMP0453 - Neutral zinc metallopeptidases, zinc-binding region:CBS domain (NCBI)

GO Terms: GO:0006508, GO:0004222, GO:0008270

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0453

Tuberculist Genomic Region

MMP1686 pseudouridine syntase related protein (NCBI)

Details for MMP1686 - pseudouridine syntase related protein (NCBI)

GO Terms: GO:0031119, GO:0003723, GO:0016439

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1686

Tuberculist Genomic Region

MMP0547 RecJ related protein (NCBI)

Details for MMP0547 - RecJ related protein (NCBI)

GO Terms: GO:0003676, GO:0016787, GO:0030145

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0547

Tuberculist Genomic Region

MMP0147 NifH/frxC family:ATP/GTP-binding site motif A (P-loop) (NCBI)

Details for MMP0147 - NifH/frxC family:ATP/GTP-binding site motif A (P-loop) (NCBI)

GO Terms: GO:0006118, GO:0009399, GO:0016611, GO:0016612, GO:0016613, GO:0005524, GO:0016734, GO:0016735, GO:0016163, GO:0016733

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0147

Tuberculist Genomic Region

MMP0570 conserved hypothetical protein (NCBI)

Details for MMP0570 - conserved hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0570

Tuberculist Genomic Region

MMP0792 membrane protein (NCBI)

Details for MMP0792 - membrane protein (NCBI)

GO Terms: GO:0006508, GO:0008451

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0792

Tuberculist Genomic Region

MMP0587 Na+/H+ exchanger (NCBI)

Details for MMP0587 - Na+/H+ exchanger (NCBI)

GO Terms: GO:0006885, GO:0016021, GO:0015299

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0587

Tuberculist Genomic Region

MMP0793 possible predicted protein (NCBI)

Details for MMP0793 - possible predicted protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0793

Tuberculist Genomic Region

MMP0717 hypothetical protein (NCBI)

Details for MMP0717 - hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0717

Tuberculist Genomic Region

MMP0008 DNA polymerase, archaeal type II, small subunit (NCBI)

Details for MMP0008 - DNA polymerase, archaeal type II, small subunit (NCBI)

GO Terms: GO:0006260, GO:0005634, GO:0003676, GO:0003893, GO:0016448, GO:0016452, GO:0003889, GO:0003894, GO:0008408, GO:0016449, GO:0019984, GO:0003890, GO:0003895, GO:0015999, GO:0016450, GO:0003891, GO:0016000, GO:0016451

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0008

Tuberculist Genomic Region

MMP0760 hypothetical protein (NCBI)

Details for MMP0760 - hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0760

Tuberculist Genomic Region

MMP0304 conserved hypothetical archaeal protein (NCBI)

Details for MMP0304 - conserved hypothetical archaeal protein (NCBI)

GO Terms: GO:0006281, GO:0003906

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0304

Tuberculist Genomic Region

MMP0761 hypothetical protein (NCBI)

Details for MMP0761 - hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0761

Tuberculist Genomic Region

MMP0499 conserved hypothetical protein (NCBI)

Details for MMP0499 - conserved hypothetical protein (NCBI)

GO Terms: GO:0006355, GO:0005622, GO:0003700

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0499

Tuberculist Genomic Region

MMP0795 possible predicted protein (NCBI)

Details for MMP0795 - possible predicted protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0795

Tuberculist Genomic Region

MMP0871 conserved hypothetical membrane protein (NCBI)

Details for MMP0871 - conserved hypothetical membrane protein (NCBI)

GO Terms: GO:0016020

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0871

Tuberculist Genomic Region

MMP0843 hypothetical protein (NCBI)

Details for MMP0843 - hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0843

Tuberculist Genomic Region

MMP1059 conserved hypothetical protein (NCBI)

Details for MMP1059 - conserved hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1059

Tuberculist Genomic Region

MMP0991 conserved hypothetical protein (NCBI)

Details for MMP0991 - conserved hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0991

Tuberculist Genomic Region

MMP1236 conserved hypothetical protein (NCBI)

Details for MMP1236 - conserved hypothetical protein (NCBI)

GO Terms: GO:0009228

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1236

Tuberculist Genomic Region

MMP1009 Dihydroorotase (NCBI)

Details for MMP1009 - Dihydroorotase (NCBI)

GO Terms: GO:0004151

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1009

Tuberculist Genomic Region

MMP1580 Dihydropteroate synthase, DHPS:Dihydropteroate synthase-related protein synthase-related protein (NCBI)

Details for MMP1580 - Dihydropteroate synthase, DHPS:Dihydropteroate synthase-related protein synthase-related protein (NCBI)

GO Terms: GO:0009396, GO:0004156

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1580

Tuberculist Genomic Region

MMP1228 conserved hypothetical protein (NCBI)

Details for MMP1228 - conserved hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1228

Tuberculist Genomic Region

MMP1597 Family of unknown function DUF64 (NCBI)

Details for MMP1597 - Family of unknown function DUF64 (NCBI)

GO Terms: GO:0006629, GO:0008962

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1597

Tuberculist Genomic Region

MMP1398 Succinyl-diaminopimelate desuccinylase (NCBI)

Details for MMP1398 - Succinyl-diaminopimelate desuccinylase (NCBI)

GO Terms: GO:0009085, GO:0006508, GO:0008237, GO:0009014, GO:0046872, GO:0046983

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1398

Tuberculist Genomic Region

MMP1636 General substrate transporter (NCBI)

Details for MMP1636 - General substrate transporter (NCBI)

GO Terms: GO:0015904, GO:0046677, GO:0016021, GO:0015520

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1636

Tuberculist Genomic Region

MMP1447 Cro repressor family Helix-turn-helix motif containing protein (NCBI)

Details for MMP1447 - Cro repressor family Helix-turn-helix motif containing protein (NCBI)

GO Terms: GO:0043565

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1447

Tuberculist Genomic Region

Displaying 1 - 31 of 31

Motifs

Motif 1: e-value: 21 e-value: 620

Module Plots

Regulation

Regulator Interaction Influence Weight Other Influences

MMP0097

Transcriptional regulator protein, Helix-turn-helix motif (NCBI)

MMP1015

Transcription factor CBF/NF-Y/archaeal histone:Histone-fold/TFIID-TAF/NF-Y domain (NCBI)
 up-regulates 0.55

MMP0097

MMP1015

GO Enrichment

Category: MF
Category GO ID GO Term Annotated Expected Significant p-value
MF GO:0016787 hydrolase activity 62 0.88 4 0.0081
MF GO:0004518 nuclease activity 15 0.21 2 0.0175
MF GO:0016788 hydrolase activity, acting on ester bond... 19 0.27 2 0.0276

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