Methanococcus maripaludis S2 Module 40 Residual: 0.30

×

Error message

  • Unable to create CTools CSS cache directory. Check the permissions on your files directory.
  • Unable to create CTools CSS cache directory. Check the permissions on your files directory.

Summary

Residual: 0.30 Score: -14.8382 version: mmp_cmonkey_11_Oct_11

Members

MMP0098 ferredoxin (NCBI)

Details for MMP0098 - ferredoxin (NCBI)

GO Terms: GO:0006118, GO:0009055, GO:0051536

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0098

Tuberculist Genomic Region

MMP1129 Peptidyl-prolyl cis-trans isomerase, cyclophilin type (NCBI)

Details for MMP1129 - Peptidyl-prolyl cis-trans isomerase, cyclophilin type (NCBI)

GO Terms: GO:0006457, GO:0030051, GO:0042027, GO:0003755, GO:0004600

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1129

Tuberculist Genomic Region

MMP0230 Conserved hypothetical protein (NCBI)

Details for MMP0230 - Conserved hypothetical protein (NCBI)

GO Terms: GO:0003824

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0230

Tuberculist Genomic Region

MMP1205 3-phosphoshikimate-1-carboxyvinyltransferase (NCBI)

Details for MMP1205 - 3-phosphoshikimate-1-carboxyvinyltransferase (NCBI)

GO Terms: GO:0003866

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1205

Tuberculist Genomic Region

MMP0393 phosphoesterase-like protein (NCBI)

Details for MMP0393 - phosphoesterase-like protein (NCBI)

GO Terms: GO:0016787

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0393

Tuberculist Genomic Region

MMP1260 Conserved hypothetical Archael protein (NCBI)

Details for MMP1260 - Conserved hypothetical Archael protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1260

Tuberculist Genomic Region

MMP0541 Phosphoserine phosphatase (NCBI)

Details for MMP0541 - Phosphoserine phosphatase (NCBI)

GO Terms: GO:0006564, GO:0004647

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0541

Tuberculist Genomic Region

MMP0318 Dihydroxy-acid dehydratase (NCBI)

Details for MMP0318 - Dihydroxy-acid dehydratase (NCBI)

GO Terms: GO:0009082, GO:0004160

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0318

Tuberculist Genomic Region

MMP0583 conserved hypothetical protein (NCBI)

Details for MMP0583 - conserved hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0583

Tuberculist Genomic Region

MMP0326 Methionyl-tRNA synthetase (NCBI)

Details for MMP0326 - Methionyl-tRNA synthetase (NCBI)

GO Terms: GO:0006431, GO:0005737, GO:0000049, GO:0004825, GO:0004869, GO:0005524

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0326

Tuberculist Genomic Region

MMP0872 Porphobilinogen deaminase (NCBI)

Details for MMP0872 - Porphobilinogen deaminase (NCBI)

GO Terms: GO:0033014, GO:0004418

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0872

Tuberculist Genomic Region

MMP0408 H+-transporting two-sector ATPase, A subunit (NCBI)

Details for MMP0408 - H+-transporting two-sector ATPase, A subunit (NCBI)

GO Terms: GO:0015992, GO:0016469, GO:0016820

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0408

Tuberculist Genomic Region

MMP0887 conserved hypothetical protein (NCBI)

Details for MMP0887 - conserved hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0887

Tuberculist Genomic Region

MMP0708 conserved hypothetical protein (NCBI)

Details for MMP0708 - conserved hypothetical protein (NCBI)

GO Terms: GO:0008152, GO:0003824

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0708

Tuberculist Genomic Region

MMP1032 replication protein A (NCBI)

Details for MMP1032 - replication protein A (NCBI)

GO Terms: GO:0003676, GO:0008270

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1032

Tuberculist Genomic Region

MMP0947 ATP phosphoribosyltransferase (NCBI)

Details for MMP0947 - ATP phosphoribosyltransferase (NCBI)

GO Terms: GO:0000105, GO:0003879

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0947

Tuberculist Genomic Region

MMP1075 dUTP diphosphatase (NCBI)

Details for MMP1075 - dUTP diphosphatase (NCBI)

GO Terms: GO:0046080, GO:0004170

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1075

Tuberculist Genomic Region

MMP1266 Glutamyl-tRNA(Gln) amidotransferase subunit D (NCBI)

Details for MMP1266 - Glutamyl-tRNA(Gln) amidotransferase subunit D (NCBI)

GO Terms: GO:0006520, GO:0006450, GO:0050567, GO:0004067

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1266

Tuberculist Genomic Region

MMP1076 Bacterial transferase hexapeptide repeat:ADP-glucose pyrophosphorylase (NCBI)

Details for MMP1076 - Bacterial transferase hexapeptide repeat:ADP-glucose pyrophosphorylase (NCBI)

GO Terms: GO:0009058, GO:0019134, GO:0016779, GO:0003977, GO:0008415

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1076

Tuberculist Genomic Region

MMP1701 Amino acid-binding ACT (NCBI)

Details for MMP1701 - Amino acid-binding ACT (NCBI)

GO Terms: GO:0008152, GO:0016597

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1701

Tuberculist Genomic Region

MMP1077 Phosphoglucomutase/phosphomannomutase:Calcium- bin ding EF-hand (NCBI)

Details for MMP1077 - Phosphoglucomutase/phosphomannomutase:Calcium- bin ding EF-hand (NCBI)

GO Terms: GO:0005975, GO:0008966, GO:0005509

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1077

Tuberculist Genomic Region

MMP1702 Homoserine dehydrogenase (NCBI)

Details for MMP1702 - Homoserine dehydrogenase (NCBI)

GO Terms: GO:0008652, GO:0004412

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1702

Tuberculist Genomic Region

MMP1116 endoglucanase (NCBI)

Details for MMP1116 - endoglucanase (NCBI)

GO Terms: GO:0008237, GO:0008810

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1116

Tuberculist Genomic Region

Displaying 1 - 23 of 23

Motifs

Motif 1: e-value: 0.0033 e-value: 40000

Module Plots

Regulation

Regulator Interaction Influence Weight Other Influences

MMP0907

predicted archaeal transcriptional regulator (NCBI)

H2

 up-regulates 0.53

MMP0907

H2

MMP0386

archaeal histone A (NCBI)

MMP0629

conserved hypothetical archaeal protein (NCBI)
 up-regulates 0.39

MMP0386

MMP0629

MMP0629

conserved hypothetical archaeal protein (NCBI)

MMP0907

predicted archaeal transcriptional regulator (NCBI)
 down-regulates -0.17

MMP0629

MMP0907

MMP1275

hypothetical protein (NCBI)

H2

 up-regulates 0.11

MMP1275

H2

GO Enrichment

Category: MF
Category GO ID GO Term Annotated Expected Significant p-value
MF GO:0016765 transferase activity, transferring alkyl... 5 0.09 2 0.0030

Comments

Log in to post comments